RNA–Protein interactions for RNA: YDR041W

RSM10, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM10, Length 612 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM10	YDR041W	SSC1	P0CS90	654 aa	Known RBP	4.56	□□□□□ -1.68
RSM10	YDR041W	RPL20A	P0CX23	172 aa	Known RBP	4.56	□□□□□ -1.68
RSM10	YDR041W	RPL20B	P0CX24	172 aa	Predicted RBP	4.56	□□□□□ -1.68
RSM10	YDR041W	TFS1	P14306	219 aa		4.56	□□□□□ -1.68
RSM10	YDR041W	CDC10	P25342	322 aa	Known RBP	4.56	□□□□□ -1.68
RSM10	YDR041W	TIP1	P27654	210 aa	Predicted RBP	4.56	□□□□□ -1.68
RSM10	YDR041W	HOM6	P31116	359 aa	Known RBP	4.56	□□□□□ -1.68
RSM10	YDR041W	ANR2	P36090	516 aa	Predicted RBP	4.56	□□□□□ -1.68
RSM10	YDR041W	DBP7	P36120	742 aa	Known RBP	4.56	□□□□□ -1.68
RSM10	YDR041W	YAT2	P40017	923 aa		4.56	□□□□□ -1.68
RSM10	YDR041W	SMB1	P40018	196 aa	Known RBP	4.56	□□□□□ -1.68
RSM10	YDR041W	ALG8	P40351	577 aa		4.56	□□□□□ -1.68
RSM10	YDR041W	YGR042W	P53227	271 aa		4.56	□□□□□ -1.68
RSM10	YDR041W	MAL13	P53338	473 aa		4.56	□□□□□ -1.68
RSM10	YDR041W	IBD2	P53892	351 aa		4.56	□□□□□ -1.68
RSM10	YDR041W	YLR460C	P54007	376 aa		4.56	□□□□□ -1.68
RSM10	YDR041W	TRM44	Q02648	567 aa	Known RBP	4.56	□□□□□ -1.68
RSM10	YDR041W	IRC15	Q02733	499 aa		4.56	□□□□□ -1.68
RSM10	YDR041W	BNA5	Q05979	453 aa		4.56	□□□□□ -1.68
RSM10	YDR041W	MRPL51	Q06090	140 aa	Predicted RBP	4.56	□□□□□ -1.68
RSM10	YDR041W	SFH1	Q06168	426 aa		4.56	□□□□□ -1.68
RSM10	YDR041W	YDL114W	Q07530	308 aa		4.56	□□□□□ -1.68
RSM10	YDR041W	ESA1	Q08649	445 aa		4.56	□□□□□ -1.68
RSM10	YDR041W	PNS1	Q12412	539 aa		4.56	□□□□□ -1.68
RSM10	YDR041W	AQY1	P0CD91	305 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	ZWF1	P11412	505 aa	Known RBP	4.55	□□□□□ -1.68
RSM10	YDR041W	CTA1	P15202	515 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	URA6	P15700	204 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	HEM15	P16622	393 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	QRI5	P32344	111 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	MCH2	P36032	473 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	SDS24	P38314	527 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	NDT80	P38830	627 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	DHH1	P39517	506 aa	Known RBP	4.55	□□□□□ -1.68
RSM10	YDR041W	YIL169C	P40442	995 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	AGE2	P40529	298 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	AIM23	P47015	356 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	YJL016W	P47072	561 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	MTM1	P53320	366 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	YNL234W	P53857	426 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	PRP38	Q00723	242 aa	Predicted RBP	4.55	□□□□□ -1.68
RSM10	YDR041W	CCE1	Q03702	353 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	MFG1	Q07684	458 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	THI20	Q08224	551 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	LSO2	Q3E772	92 aa	Known RBP	4.55	□□□□□ -1.68
RSM10	YDR041W	PET20	Q99373	253 aa		4.55	□□□□□ -1.68
RSM10	YDR041W	STH1	P32597	1359 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	CAP2	P13517	287 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	YAP1	P19880	650 aa	Known RBP	4.54	□□□□□ -1.68
RSM10	YDR041W	EXG1	P23776	448 aa	Known RBP	4.54	□□□□□ -1.68
RSM10	YDR041W	EHD3	P28817	500 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	HMT1	P38074	348 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	CHK1	P38147	527 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	VMA22	P38784	181 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	RSM25	P40496	264 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	ICE2	P40499	491 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	TES1	P41903	349 aa	Known RBP	4.54	□□□□□ -1.68
RSM10	YDR041W	NUP57	P48837	541 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	UBC13	P52490	153 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	BRR6	P53062	197 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	MMS2	P53152	137 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	GND2	P53319	492 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	VPS60	Q03390	229 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	TPO3	Q06451	622 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	YAP7	Q08182	245 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	RDL2	Q08742	149 aa	Known RBP	4.54	□□□□□ -1.68
RSM10	YDR041W	DDC1	Q08949	612 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	YDL009C	Q12210	107 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	ICT1	Q12385	394 aa		4.54	□□□□□ -1.68
RSM10	YDR041W	RPS3	P05750	240 aa	Known RBP	4.53	□□□□□ -1.68
RSM10	YDR041W	GIT1	P25346	518 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	CPR3	P25719	182 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	TPS2	P31688	896 aa	Known RBP	4.53	□□□□□ -1.68
RSM10	YDR041W	SPT4	P32914	102 aa	Predicted RBP	4.53	□□□□□ -1.68
RSM10	YDR041W	YBR241C	P38142	488 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	JLP2	P40206	208 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	IRC18	P47056	224 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	VPS25	P47142	202 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	CDH1	P53197	566 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	GTR2	P53290	341 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	YDC1	Q02896	317 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	BCH1	Q05029	724 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	YPR098C	Q06089	161 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	YPR147C	Q06522	304 aa	Known RBP	4.53	□□□□□ -1.68
RSM10	YDR041W	BSP1	Q06604	576 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	YNG1	Q08465	219 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	RRS1	Q08746	203 aa	Known RBP	4.53	□□□□□ -1.68
RSM10	YDR041W	ECM5	Q03214	1411 aa		4.53	□□□□□ -1.68
RSM10	YDR041W	TPI1	P00942	248 aa	Known RBP	4.52	□□□□□ -1.69
RSM10	YDR041W	BCY1	P07278	416 aa	Known RBP	4.52	□□□□□ -1.69
RSM10	YDR041W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
RSM10	YDR041W	ERD1	P16151	362 aa		4.52	□□□□□ -1.69
RSM10	YDR041W	COQ3	P27680	312 aa		4.52	□□□□□ -1.69
RSM10	YDR041W	RAD5	P32849	1169 aa	Predicted RBP	4.52	□□□□□ -1.69
RSM10	YDR041W	YCR087C-A	P37263	153 aa		4.52	□□□□□ -1.69
RSM10	YDR041W	DER1	P38307	211 aa		4.52	□□□□□ -1.69
RSM10	YDR041W	RRP3	P38712	501 aa	Known RBP	4.52	□□□□□ -1.69
RSM10	YDR041W	YAP3	P38749	330 aa		4.52	□□□□□ -1.69
RSM10	YDR041W	IRC7	P43623	340 aa		4.52	□□□□□ -1.69
RSM10	YDR041W	ALG13	P53178	202 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms