RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	RPL20A	P0CX23	172 aa	Known RBP	5.27	□□□□□ -1.57
TRP1	YDR007W	RPL20B	P0CX24	172 aa	Predicted RBP	5.27	□□□□□ -1.57
TRP1	YDR007W	HEM15	P16622	393 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	ATG22	P25568	528 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	HMX1	P32339	317 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	KKQ8	P36004	724 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	PMU1	P36069	295 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	PDX3	P38075	228 aa	Known RBP	5.27	□□□□□ -1.57
TRP1	YDR007W	YMR262W	P38430	313 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	YHL049C	P38722	271 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	YEL075C	P39972	122 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	RMD6	P39975	231 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	YER189W	P40104	122 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	YFL064C	P43540	174 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	RRN5	Q02983	363 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	NHP10	Q03435	203 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	SCS7	Q03529	384 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	VHS1	Q03785	461 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	LDS2	Q08218	356 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	YOR342C	Q12182	319 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	AYT1	Q12226	474 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	YOL107W	Q12239	342 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	TPT1	Q12272	230 aa	Known RBP	5.27	□□□□□ -1.57
TRP1	YDR007W	DCP1	Q12517	231 aa	Predicted RBP	5.27	□□□□□ -1.57
TRP1	YDR007W	MED11	Q99278	115 aa		5.27	□□□□□ -1.57
TRP1	YDR007W	FAS2	P19097	1887 aa	Known RBP	5.26	□□□□□ -1.57
TRP1	YDR007W	HEM2	P05373	342 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	SNF4	P12904	322 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	CNB1	P25296	175 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	SEC1	P30619	724 aa	Known RBP	5.26	□□□□□ -1.57
TRP1	YDR007W	NTG1	P31378	399 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	MSK1	P32048	576 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	PPQ1	P32945	549 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	YKL097C	P34245	136 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	RIB5	P38145	238 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	FMP23	P38231	175 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	SMF2	P38778	549 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	KRE29	P40026	464 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	UFE1	P41834	346 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	TOS3	P43637	560 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	MNN5	P46982	586 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	UBC12	P52491	188 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	NOP19	P53317	196 aa	Predicted RBP	5.26	□□□□□ -1.57
TRP1	YDR007W	RET3	P53600	189 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	COG5	P53951	403 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	ERV25	P54837	211 aa	Known RBP	5.26	□□□□□ -1.57
TRP1	YDR007W	YPL068C	Q02749	293 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	FAR10	Q06001	478 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	KAP95	Q06142	861 aa	Known RBP	5.26	□□□□□ -1.57
TRP1	YDR007W	ASA1	Q06822	443 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	ZEO1	Q08245	113 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	SLD7	Q08457	257 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	SYC1	Q08553	188 aa	Predicted RBP	5.26	□□□□□ -1.57
TRP1	YDR007W	YPR1	Q12458	312 aa		5.26	□□□□□ -1.57
TRP1	YDR007W	TY4B-H	P0C2J7	1802 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	TY4B-J	P47024	1803 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	RPL15A	P05748	204 aa	Known RBP	5.25	□□□□□ -1.57
TRP1	YDR007W	TPK3	P05986	398 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	RAD10	P06838	210 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	PET54	P10834	293 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	CAP2	P13517	287 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	CDC23	P16522	626 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	SLY1	P22213	666 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	PUT3	P25502	979 aa	Predicted RBP	5.25	□□□□□ -1.57
TRP1	YDR007W	HYM1	P32464	399 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	PTM1	P32857	523 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	CBT1	P36038	271 aa	Predicted RBP	5.25	□□□□□ -1.57
TRP1	YDR007W	YAT2	P40017	923 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	RPE1	P46969	238 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	AIM23	P47015	356 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	AZR1	P50080	613 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	CWC23	P52868	283 aa	Predicted RBP	5.25	□□□□□ -1.57
TRP1	YDR007W	YMR181C	Q03231	154 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	TRM82	Q03774	444 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	ERP1	Q05359	219 aa	Known RBP	5.25	□□□□□ -1.57
TRP1	YDR007W	YLR053C	Q12026	108 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	YPR063C	Q12160	140 aa		5.25	□□□□□ -1.57
TRP1	YDR007W	COX4	P04037	155 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	RPS24A	P0CX31	135 aa	Known RBP	5.24	□□□□□ -1.57
TRP1	YDR007W	RPS24B	P0CX32	135 aa	Known RBP	5.24	□□□□□ -1.57
TRP1	YDR007W	NSP1	P14907	823 aa	Known RBP	5.24	□□□□□ -1.57
TRP1	YDR007W	GRR1	P24814	1151 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	CHA1	P25379	360 aa	Known RBP	5.24	□□□□□ -1.57
TRP1	YDR007W	ATS1	P31386	333 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	SPR1	P32603	445 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	SKT5	P34226	696 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	ECM13	P38195	257 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	PRS2	P38620	318 aa	Known RBP	5.24	□□□□□ -1.57
TRP1	YDR007W	YHR045W	P38775	560 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	THO1	P40040	218 aa	Known RBP	5.24	□□□□□ -1.57
TRP1	YDR007W	DSE1	P40077	573 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	YMR134W	P40207	237 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	SLM1	P40485	686 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	RPR2	P40571	144 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	SFH5	P47008	294 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	HOC1	P47124	396 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	SPR6	Q01684	191 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	DAP1	Q12091	152 aa		5.24	□□□□□ -1.57
TRP1	YDR007W	PFK27	Q12471	397 aa	Predicted RBP	5.24	□□□□□ -1.57
TRP1	YDR007W	VPS63	O13549	108 aa		5.23	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms