RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C POP2P39008 433 aa2.98□□□□□ -1.93
RRI1YDL216C SWC4P53201 476 aa2.98□□□□□ -1.93
RRI1YDL216C ACT1P60010 375 aaKnown RBP2.98□□□□□ -1.93
RRI1YDL216C REX3Q12090 404 aa2.98□□□□□ -1.93
RRI1YDL216C SGT2Q12118 346 aaKnown RBP2.98□□□□□ -1.93
RRI1YDL216C YPR063CQ12160 140 aa2.98□□□□□ -1.93
RRI1YDL216C SAR1P20606 190 aaKnown RBP2.97□□□□□ -1.93
RRI1YDL216C RPL16BP26785 198 aaKnown RBP2.97□□□□□ -1.93
RRI1YDL216C MRPL6P32904 214 aa2.97□□□□□ -1.93
RRI1YDL216C CDC40P40968 455 aaPredicted RBP2.97□□□□□ -1.93
RRI1YDL216C BUD13P46947 266 aaPredicted RBP2.97□□□□□ -1.93
RRI1YDL216C COX16P47081 118 aa2.97□□□□□ -1.93
RRI1YDL216C RIB4P50861 169 aaPredicted RBP2.97□□□□□ -1.93
RRI1YDL216C VOA1P53262 265 aa2.97□□□□□ -1.93
RRI1YDL216C PBP4Q07362 185 aaKnown RBP2.97□□□□□ -1.93
RRI1YDL216C CAR2P07991 424 aaKnown RBP2.96□□□□□ -1.93
RRI1YDL216C RPS23AP0CX29 145 aaKnown RBP2.96□□□□□ -1.93
RRI1YDL216C RPS23BP0CX30 145 aa2.96□□□□□ -1.93
RRI1YDL216C RPL5P26321 297 aaKnown RBP2.96□□□□□ -1.93
RRI1YDL216C ARO4P32449 370 aaKnown RBP2.96□□□□□ -1.93
RRI1YDL216C GCG1P32656 232 aaKnown RBP2.96□□□□□ -1.93
RRI1YDL216C LIF1P53150 421 aa2.96□□□□□ -1.93
RRI1YDL216C DBP6P53734 629 aaKnown RBP2.96□□□□□ -1.93
RRI1YDL216C YNL040WP53960 456 aaPredicted RBP2.96□□□□□ -1.93
RRI1YDL216C DIA1P54005 336 aa2.96□□□□□ -1.93
RRI1YDL216C ARC18Q05933 178 aaKnown RBP2.96□□□□□ -1.93
RRI1YDL216C DAL5P15365 543 aa2.95□□□□□ -1.94
RRI1YDL216C GPX1P36014 167 aa2.95□□□□□ -1.94
RRI1YDL216C OSW5P40219 148 aa2.95□□□□□ -1.94
RRI1YDL216C YJL144WP47009 104 aa2.95□□□□□ -1.94
RRI1YDL216C UBC13P52490 153 aa2.95□□□□□ -1.94
RRI1YDL216C ABZ2Q03266 374 aa2.95□□□□□ -1.94
RRI1YDL216C YDR222WQ04925 415 aa2.95□□□□□ -1.94
RRI1YDL216C APC9Q12107 265 aa2.95□□□□□ -1.94
RRI1YDL216C SIA1Q12212 622 aa2.95□□□□□ -1.94
RRI1YDL216C IES3Q12345 250 aa2.95□□□□□ -1.94
RRI1YDL216C PFK27Q12471 397 aaPredicted RBP2.95□□□□□ -1.94
RRI1YDL216C CDC13P32797 924 aaKnown RBP2.94□□□□□ -1.94
RRI1YDL216C MNN9P39107 395 aaKnown RBP2.94□□□□□ -1.94
RRI1YDL216C YFL064CP43540 174 aa2.94□□□□□ -1.94
RRI1YDL216C YFR045WP43617 309 aa2.94□□□□□ -1.94
RRI1YDL216C GTO3Q04806 366 aa2.94□□□□□ -1.94
RRI1YDL216C RRG8Q06109 277 aa2.94□□□□□ -1.94
RRI1YDL216C RRP42Q12277 265 aaPredicted RBP2.94□□□□□ -1.94
RRI1YDL216C RAD7P06779 565 aa2.93□□□□□ -1.94
RRI1YDL216C RPL31AP0C2H8 113 aaKnown RBP2.93□□□□□ -1.94
RRI1YDL216C TPO5P36029 618 aa2.93□□□□□ -1.94
RRI1YDL216C SWD2P36104 329 aaPredicted RBP2.93□□□□□ -1.94
RRI1YDL216C UFD1P53044 361 aa2.93□□□□□ -1.94
RRI1YDL216C BIO4P53630 237 aa2.93□□□□□ -1.94
RRI1YDL216C CUR1Q06469 252 aa2.93□□□□□ -1.94
RRI1YDL216C VAC14Q06708 880 aa2.93□□□□□ -1.94
RRI1YDL216C YPC1P38298 316 aa2.93□□□□□ -1.94
RRI1YDL216C YHL044WP38727 235 aa2.93□□□□□ -1.94
RRI1YDL216C LOC1P43586 204 aaPredicted RBP2.93□□□□□ -1.94
RRI1YDL216C ECO1P43605 281 aa2.93□□□□□ -1.94
RRI1YDL216C MPP10P47083 593 aaKnown RBP2.93□□□□□ -1.94
RRI1YDL216C HSH155P49955 971 aaKnown RBP2.93□□□□□ -1.94
RRI1YDL216C DXO1Q06349 442 aa2.93□□□□□ -1.94
RRI1YDL216C YPL278CQ08990 100 aa2.93□□□□□ -1.94
RRI1YDL216C MDY2Q12285 212 aa2.93□□□□□ -1.94
RRI1YDL216C YPR064WQ12492 139 aa2.93□□□□□ -1.94
RRI1YDL216C DAL81P21657 970 aa2.92□□□□□ -1.94
RRI1YDL216C IMP3P32899 183 aaPredicted RBP2.92□□□□□ -1.94
RRI1YDL216C TKL2P33315 681 aa2.92□□□□□ -1.94
RRI1YDL216C MRPL3P36516 390 aa2.92□□□□□ -1.94
RRI1YDL216C SMC2P38989 1170 aaKnown RBP2.92□□□□□ -1.94
RRI1YDL216C IGO1P53897 168 aa2.92□□□□□ -1.94
RRI1YDL216C YMR111CQ04461 462 aaPredicted RBP2.92□□□□□ -1.94
RRI1YDL216C YDR114CQ04597 100 aa2.92□□□□□ -1.94
RRI1YDL216C HRT1Q08273 121 aa2.92□□□□□ -1.94
RRI1YDL216C RPC25P35718 212 aa2.91□□□□□ -1.94
RRI1YDL216C VAB2P40003 282 aa2.91□□□□□ -1.94
RRI1YDL216C GDS1P41913 522 aa2.91□□□□□ -1.94
RRI1YDL216C PRP24P49960 444 aaKnown RBP2.91□□□□□ -1.94
RRI1YDL216C YPL077CQ02831 240 aa2.91□□□□□ -1.94
RRI1YDL216C YPL113CQ02961 396 aa2.91□□□□□ -1.94
RRI1YDL216C RLP24Q07915 199 aaKnown RBP2.91□□□□□ -1.94
RRI1YDL216C YOL163WP0CF20 169 aa2.9□□□□□ -1.95
RRI1YDL216C YAK1P14680 807 aa2.9□□□□□ -1.95
RRI1YDL216C VPS1P21576 704 aaKnown RBP2.9□□□□□ -1.95
RRI1YDL216C ALK2P32789 676 aaPredicted RBP2.9□□□□□ -1.95
RRI1YDL216C YBR062CP38239 180 aa2.9□□□□□ -1.95
RRI1YDL216C KRE29P40026 464 aa2.9□□□□□ -1.95
RRI1YDL216C YGL088WP53151 121 aa2.9□□□□□ -1.95
RRI1YDL216C MRX4Q12467 430 aa2.9□□□□□ -1.95
RRI1YDL216C YAL063C-AQ3E791 96 aa2.9□□□□□ -1.95
RRI1YDL216C CDC42P19073 191 aa2.89□□□□□ -1.95
RRI1YDL216C PRE7P23724 241 aaKnown RBP2.89□□□□□ -1.95
RRI1YDL216C IMP1P28627 190 aa2.89□□□□□ -1.95
RRI1YDL216C YKL063CP35725 167 aa2.89□□□□□ -1.95
RRI1YDL216C SDH4P37298 181 aa2.89□□□□□ -1.95
RRI1YDL216C YIL012WP40551 113 aa2.89□□□□□ -1.95
RRI1YDL216C GTO1P48239 356 aa2.89□□□□□ -1.95
RRI1YDL216C KEL2P50090 882 aa2.89□□□□□ -1.95
RRI1YDL216C YPT32P51996 222 aaKnown RBP2.89□□□□□ -1.95
RRI1YDL216C PEX30Q06169 523 aa2.89□□□□□ -1.95
RRI1YDL216C ATP6P00854 259 aa2.88□□□□□ -1.95
RRI1YDL216C RPC37P36121 282 aa2.88□□□□□ -1.95
RRI1YDL216C RSM27P53305 110 aa2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms