RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	YDR476C	Q03362	224 aa		4.04	□□□□□ -1.76
RPC53	YDL150W	YMR111C	Q04461	462 aa	Predicted RBP	4.04	□□□□□ -1.76
RPC53	YDL150W	DCS1	Q06151	350 aa		4.04	□□□□□ -1.76
RPC53	YDL150W	UAF30	Q08747	228 aa		4.04	□□□□□ -1.76
RPC53	YDL150W	MDM35	O60200	86 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	IPP1	P00817	287 aa	Known RBP	4.03	□□□□□ -1.76
RPC53	YDL150W	CCA1	P21269	546 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	PPH21	P23594	369 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	ERV1	P27882	189 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	ZIP1	P31111	875 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	VPS21	P36017	210 aa	Known RBP	4.03	□□□□□ -1.76
RPC53	YDL150W	YCR087C-A	P37263	153 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	YCR041W	P37265	110 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	YAL037W	P39728	267 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	HPM1	P40481	377 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	FMP32	P43557	207 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	NAS6	P50086	228 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	PCP1	P53259	346 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	EGD1	Q02642	157 aa	Known RBP	4.03	□□□□□ -1.76
RPC53	YDL150W	GIP3	Q03016	1276 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	YMR010W	Q03687	405 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	VHS1	Q03785	461 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	YDR124W	Q04608	324 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	MDM30	Q05930	598 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	BCP1	Q06338	283 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	MUM3	Q08750	479 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	YOR114W	Q12219	294 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	MHT1	Q12525	324 aa		4.03	□□□□□ -1.76
RPC53	YDL150W	RAS2	P01120	322 aa	Known RBP	4.02	□□□□□ -1.77
RPC53	YDL150W	GDH1	P07262	454 aa	Known RBP	4.02	□□□□□ -1.77
RPC53	YDL150W	HOM3	P10869	527 aa		4.02	□□□□□ -1.77
RPC53	YDL150W	MCK1	P21965	375 aa	Known RBP	4.02	□□□□□ -1.77
RPC53	YDL150W	TRX3	P25372	127 aa		4.02	□□□□□ -1.77
RPC53	YDL150W	GLC7	P32598	312 aa	Known RBP	4.02	□□□□□ -1.77
RPC53	YDL150W	RPT5	P33297	434 aa	Known RBP	4.02	□□□□□ -1.77
RPC53	YDL150W	RRN10	P38204	145 aa		4.02	□□□□□ -1.77
RPC53	YDL150W	ATG7	P38862	630 aa		4.02	□□□□□ -1.77
RPC53	YDL150W	GGC1	P38988	300 aa		4.02	□□□□□ -1.77
RPC53	YDL150W	TOM22	P49334	152 aa		4.02	□□□□□ -1.77
RPC53	YDL150W	POP6	P53218	158 aa		4.02	□□□□□ -1.77
RPC53	YDL150W	YIF1	P53845	314 aa	Known RBP	4.02	□□□□□ -1.77
RPC53	YDL150W	REX4	Q08237	289 aa		4.02	□□□□□ -1.77
RPC53	YDL150W	RPN5	Q12250	445 aa	Known RBP	4.02	□□□□□ -1.77
RPC53	YDL150W	JLP1	Q12358	412 aa		4.02	□□□□□ -1.77
RPC53	YDL150W	FAS1	P07149	2051 aa	Known RBP	4.02	□□□□□ -1.77
RPC53	YDL150W	HFA1	P32874	2273 aa		4.02	□□□□□ -1.77
RPC53	YDL150W	SPO7	P18410	259 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	SPS22	P25380	463 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	CSM1	P25651	190 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	PHO91	P27514	894 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	ATS1	P31386	333 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	SEC17	P32602	292 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	SFC1	P33303	322 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	KKQ8	P36004	724 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	MRPL17	P36528	281 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	AVT5	P38176	459 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	LYS1	P38998	373 aa	RIP-Chip data	4.01	□□□□□ -1.77	not detected
RPC53	YDL150W	AYR1	P40471	297 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	APQ12	P40532	138 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	AVT4	P50944	713 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	MIG2	P53035	382 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	SDT1	P53078	280 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	PRO2	P54885	456 aa	Known RBP	4.01	□□□□□ -1.77
RPC53	YDL150W	RHO3	Q00245	231 aa	Known RBP	4.01	□□□□□ -1.77
RPC53	YDL150W	ECM11	Q04110	302 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	DYN3	Q04949	312 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	YHC1	Q05900	231 aa	Known RBP	4.01	□□□□□ -1.77
RPC53	YDL150W	YLR413W	Q06689	675 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	SNX3	Q08826	162 aa	Known RBP	4.01	□□□□□ -1.77
RPC53	YDL150W	AEP3	Q12089	606 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	NSL1	Q12143	216 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	RUP1	Q12242	671 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	YDR262W	Q12331	272 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	RRP12	Q12754	1228 aa	Known RBP	4.01	□□□□□ -1.77
RPC53	YDL150W	MTR10	Q99189	972 aa		4.01	□□□□□ -1.77
RPC53	YDL150W	THP2	O13539	261 aa	Known RBP	4	□□□□□ -1.77
RPC53	YDL150W	RPL24A	P04449	155 aa	Known RBP	4	□□□□□ -1.77
RPC53	YDL150W	GCD2	P12754	651 aa	Predicted RBP	4	□□□□□ -1.77
RPC53	YDL150W	CBS2	P14905	389 aa		4	□□□□□ -1.77
RPC53	YDL150W	MSS116	P15424	664 aa	Known RBP	4	□□□□□ -1.77
RPC53	YDL150W	RNA14	P25298	677 aa	Known RBP	4	□□□□□ -1.77
RPC53	YDL150W	RVS161	P25343	265 aa	Known RBP	4	□□□□□ -1.77
RPC53	YDL150W	ADE1	P27616	306 aa		4	□□□□□ -1.77
RPC53	YDL150W	ATP7	P30902	174 aa		4	□□□□□ -1.77
RPC53	YDL150W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
RPC53	YDL150W	CDC13	P32797	924 aa	Known RBP	4	□□□□□ -1.77
RPC53	YDL150W	SKN1	P33336	771 aa		4	□□□□□ -1.77
RPC53	YDL150W	SPO23	P33757	523 aa		4	□□□□□ -1.77
RPC53	YDL150W	RGI1	P40043	161 aa	Predicted RBP	4	□□□□□ -1.77
RPC53	YDL150W	MAM33	P40513	266 aa		4	□□□□□ -1.77
RPC53	YDL150W	IDP2	P41939	412 aa		4	□□□□□ -1.77
RPC53	YDL150W	BIO3	P50277	480 aa		4	□□□□□ -1.77
RPC53	YDL150W	MSO1	P53604	210 aa	Known RBP	4	□□□□□ -1.77
RPC53	YDL150W	BOR1	P53838	576 aa		4	□□□□□ -1.77
RPC53	YDL150W	YOL024W	Q08172	172 aa		4	□□□□□ -1.77
RPC53	YDL150W	BSC6	Q08280	497 aa		4	□□□□□ -1.77
RPC53	YDL150W	YPL199C	Q08954	240 aa		4	□□□□□ -1.77
RPC53	YDL150W	GET4	Q12125	312 aa		4	□□□□□ -1.77
RPC53	YDL150W	SNF8	Q12483	233 aa		4	□□□□□ -1.77
RPC53	YDL150W	ADF1	Q2V2Q1	113 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms