RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W LYS21Q12122 440 aaKnown RBP7.25□□□□□ -1.25
ABP1YCR088W RPS14AP06367 137 aaKnown RBP7.24□□□□□ -1.25
ABP1YCR088W COX9P07255 59 aa7.24□□□□□ -1.25
ABP1YCR088W SAC7P17121 654 aa7.24□□□□□ -1.25
ABP1YCR088W MAG1P22134 296 aaKnown RBP7.24□□□□□ -1.25
ABP1YCR088W PBN1P25580 416 aa7.24□□□□□ -1.25
ABP1YCR088W CPR3P25719 182 aa7.24□□□□□ -1.25
ABP1YCR088W BUB3P26449 341 aa7.24□□□□□ -1.25
ABP1YCR088W VMA8P32610 256 aaKnown RBP7.24□□□□□ -1.25
ABP1YCR088W TIM12P32830 109 aa7.24□□□□□ -1.25
ABP1YCR088W CBT1P36038 271 aaPredicted RBP7.24□□□□□ -1.25
ABP1YCR088W NEM1P38757 446 aa7.24□□□□□ -1.25
ABP1YCR088W RPP1P38786 293 aa7.24□□□□□ -1.25
ABP1YCR088W RPS14BP39516 138 aaKnown RBP7.24□□□□□ -1.25
ABP1YCR088W YMR144WP40214 342 aaKnown RBP7.24□□□□□ -1.25
ABP1YCR088W YIL060WP40519 144 aa7.24□□□□□ -1.25
ABP1YCR088W SMK1P41808 388 aa7.24□□□□□ -1.25
ABP1YCR088W SFH5P47008 294 aa7.24□□□□□ -1.25
ABP1YCR088W LSM1P47017 172 aaKnown RBP7.24□□□□□ -1.25
ABP1YCR088W RSM28Q03430 361 aa7.24□□□□□ -1.25
ABP1YCR088W SNO4Q04902 237 aa7.24□□□□□ -1.25
ABP1YCR088W RSC58Q07979 502 aa7.24□□□□□ -1.25
ABP1YCR088W HSP33Q08914 237 aaKnown RBP7.24□□□□□ -1.25
ABP1YCR088W HSP32Q08992 237 aa7.24□□□□□ -1.25
ABP1YCR088W EAF3Q12432 401 aa7.24□□□□□ -1.25
ABP1YCR088W DFG16Q99234 619 aa7.24□□□□□ -1.25
ABP1YCR088W FUR1P18562 216 aaKnown RBP7.23□□□□□ -1.25
ABP1YCR088W SSH4P32343 579 aa7.23□□□□□ -1.25
ABP1YCR088W SUA5P32579 426 aa7.23□□□□□ -1.25
ABP1YCR088W OAR1P35731 278 aa7.23□□□□□ -1.25
ABP1YCR088W MRPL36P36531 177 aa7.23□□□□□ -1.25
ABP1YCR088W ECM31P38122 312 aa7.23□□□□□ -1.25
ABP1YCR088W EHT1P38295 451 aa7.23□□□□□ -1.25
ABP1YCR088W RRP3P38712 501 aaKnown RBP7.23□□□□□ -1.25
ABP1YCR088W LSM12P38828 187 aaKnown RBP7.23□□□□□ -1.25
ABP1YCR088W AIM46P38885 310 aa7.23□□□□□ -1.25
ABP1YCR088W NAB3P38996 802 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
ABP1YCR088W VPS52P39904 641 aa7.23□□□□□ -1.25
ABP1YCR088W UBX6P47049 396 aa7.23□□□□□ -1.25
ABP1YCR088W SAM37P50110 327 aa7.23□□□□□ -1.25
ABP1YCR088W LYS5P50113 272 aa7.23□□□□□ -1.25
ABP1YCR088W CAF40P53829 373 aa7.23□□□□□ -1.25
ABP1YCR088W PEX30Q06169 523 aa7.23□□□□□ -1.25
ABP1YCR088W GAL7P08431 366 aa7.23□□□□□ -1.25
ABP1YCR088W YPK2P18961 677 aa7.23□□□□□ -1.25
ABP1YCR088W MRP17P28778 131 aa7.23□□□□□ -1.25
ABP1YCR088W MRP20P32387 263 aa7.23□□□□□ -1.25
ABP1YCR088W RML2P32611 393 aa7.23□□□□□ -1.25
ABP1YCR088W EMP24P32803 203 aaKnown RBP7.23□□□□□ -1.25
ABP1YCR088W OCA5P38738 679 aa7.23□□□□□ -1.25
ABP1YCR088W PHO90P39535 881 aa7.23□□□□□ -1.25
ABP1YCR088W CAF16P43569 289 aa7.23□□□□□ -1.25
ABP1YCR088W ERV25P54837 211 aaKnown RBP7.23□□□□□ -1.25
ABP1YCR088W NAM8Q00539 523 aaKnown RBP7.23□□□□□ -1.25
ABP1YCR088W SPC19Q03954 165 aa7.23□□□□□ -1.25
ABP1YCR088W YDR344CQ05510 147 aa7.23□□□□□ -1.25
ABP1YCR088W YDL129WQ07555 291 aa7.23□□□□□ -1.25
ABP1YCR088W YLR108CQ12259 485 aa7.23□□□□□ -1.25
ABP1YCR088W NPC2Q12408 173 aa7.23□□□□□ -1.25
ABP1YCR088W SKM1Q12469 655 aa7.23□□□□□ -1.25
ABP1YCR088W MDM35O60200 86 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-DR4O74302 440 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-AP0CX57 440 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-PR1P0CX58 440 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-ORP0CX59 440 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-PR2P0CX60 440 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-DR5P0CX65 440 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-ER2P0CX66 440 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-GR3P0CX67 440 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-LR1P0CX68 440 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-MR2P0CX69 440 aa7.22□□□□□ -1.25
ABP1YCR088W NFS1P25374 497 aa7.22□□□□□ -1.25
ABP1YCR088W MDH3P32419 343 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
ABP1YCR088W MRT4P33201 236 aaKnown RBP7.22□□□□□ -1.25
ABP1YCR088W YOR062CP36025 268 aa7.22□□□□□ -1.25
ABP1YCR088W YBR238CP38330 731 aaKnown RBP7.22□□□□□ -1.25
ABP1YCR088W SKN7P38889 622 aa7.22□□□□□ -1.25
ABP1YCR088W LYS1P38998 373 aaRIP-Chip data7.22□□□□□ -1.25not detected
ABP1YCR088W TY1A-JR2P47099 440 aa7.22□□□□□ -1.25
ABP1YCR088W YJR111CP47148 283 aaKnown RBP7.22□□□□□ -1.25
ABP1YCR088W TYW3P53177 273 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-DR1Q03856 440 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-ML1Q04706 440 aaKnown RBP7.22□□□□□ -1.25
ABP1YCR088W AIM6Q07716 390 aa7.22□□□□□ -1.25
ABP1YCR088W YLR031WQ07978 186 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-BRQ12217 440 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-NL2Q12470 440 aa7.22□□□□□ -1.25
ABP1YCR088W TY1A-GR2Q12485 440 aa7.22□□□□□ -1.25
ABP1YCR088W TAO3P40468 2376 aa7.22□□□□□ -1.25
ABP1YCR088W GAL4P04386 881 aa7.21□□□□□ -1.25
ABP1YCR088W PUT1P09368 476 aa7.21□□□□□ -1.25
ABP1YCR088W MRP2P10663 115 aaPredicted RBP7.21□□□□□ -1.25
ABP1YCR088W SEC22P22214 214 aa7.21□□□□□ -1.25
ABP1YCR088W PRO1P32264 428 aa7.21□□□□□ -1.25
ABP1YCR088W YKL097CP34245 136 aa7.21□□□□□ -1.25
ABP1YCR088W MTC4P38335 694 aaKnown RBP7.21□□□□□ -1.25
ABP1YCR088W MNL1P38888 796 aa7.21□□□□□ -1.25
ABP1YCR088W YIL166CP40445 542 aa7.21□□□□□ -1.25
ABP1YCR088W LEM3P42838 414 aa7.21□□□□□ -1.25
ABP1YCR088W ALK1P43633 760 aaKnown RBP7.21□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 70.3 ms