RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W NUM1Q00402 2748 aa2.35□□□□□ -2.03
SPB1YCL054W RPL24AP04449 155 aaKnown RBP2.35□□□□□ -2.03
SPB1YCL054W RPL15AP05748 204 aaKnown RBP2.35□□□□□ -2.03
SPB1YCL054W HAP2P06774 265 aa2.35□□□□□ -2.03
SPB1YCL054W RPL35AP0CX84 120 aaKnown RBP2.35□□□□□ -2.03
SPB1YCL054W RPL35BP0CX85 120 aaKnown RBP2.35□□□□□ -2.03
SPB1YCL054W CHA1P25379 360 aaKnown RBP2.35□□□□□ -2.03
SPB1YCL054W PEX3P28795 441 aa2.35□□□□□ -2.03
SPB1YCL054W PTR2P32901 601 aa2.35□□□□□ -2.03
SPB1YCL054W TIR2P33890 251 aa2.35□□□□□ -2.03
SPB1YCL054W COS9P36034 407 aa2.35□□□□□ -2.03
SPB1YCL054W MMS21P38632 267 aa2.35□□□□□ -2.03
SPB1YCL054W RTC3P38804 111 aaPredicted RBP2.35□□□□□ -2.03
SPB1YCL054W HYR1P40581 163 aaKnown RBP2.35□□□□□ -2.03
SPB1YCL054W PSA1P41940 361 aaKnown RBP2.35□□□□□ -2.03
SPB1YCL054W YJL118WP47022 219 aa2.35□□□□□ -2.03
SPB1YCL054W MDV1P47025 714 aa2.35□□□□□ -2.03
SPB1YCL054W RTT101P47050 842 aa2.35□□□□□ -2.03
SPB1YCL054W MKC7P53379 596 aa2.35□□□□□ -2.03
SPB1YCL054W CUS2P53830 285 aaPredicted RBP2.35□□□□□ -2.03
SPB1YCL054W STP1Q00947 519 aa2.35□□□□□ -2.03
SPB1YCL054W RTT103Q05543 409 aa2.35□□□□□ -2.03
SPB1YCL054W BUR2Q05949 395 aa2.35□□□□□ -2.03
SPB1YCL054W SRO7Q12038 1033 aa2.35□□□□□ -2.03
SPB1YCL054W PRP46Q12417 451 aaPredicted RBP2.35□□□□□ -2.03
SPB1YCL054W LAA1P39526 2014 aa2.34□□□□□ -2.03
SPB1YCL054W RPL22AP05749 121 aaKnown RBP2.34□□□□□ -2.03
SPB1YCL054W HEM15P16622 393 aa2.34□□□□□ -2.03
SPB1YCL054W ARF2P19146 181 aaKnown RBP2.34□□□□□ -2.03
SPB1YCL054W PBN1P25580 416 aa2.34□□□□□ -2.03
SPB1YCL054W DTR1P38125 572 aa2.34□□□□□ -2.03
SPB1YCL054W ARC40P38328 384 aaKnown RBP2.34□□□□□ -2.03
SPB1YCL054W XBP1P40489 647 aa2.34□□□□□ -2.03
SPB1YCL054W DSN1P40568 576 aa2.34□□□□□ -2.03
SPB1YCL054W OST1P41543 476 aaKnown RBP2.34□□□□□ -2.03
SPB1YCL054W DIM1P41819 318 aaKnown RBP2.34□□□□□ -2.03
SPB1YCL054W TAF6P53040 516 aa2.34□□□□□ -2.03
SPB1YCL054W YGR168CP53293 376 aa2.34□□□□□ -2.03
SPB1YCL054W OKP1P53298 406 aa2.34□□□□□ -2.03
SPB1YCL054W NOP13P53883 403 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
SPB1YCL054W SKI8Q02793 397 aaPredicted RBP2.34□□□□□ -2.03
SPB1YCL054W YOR029WQ12243 111 aa2.34□□□□□ -2.03
SPB1YCL054W CMC2Q3E7A4 109 aa2.34□□□□□ -2.03
SPB1YCL054W ADH2P00331 348 aaKnown RBP2.34□□□□□ -2.04
SPB1YCL054W CYC3P06182 269 aa2.34□□□□□ -2.04
SPB1YCL054W RHO1P06780 209 aaKnown RBP2.34□□□□□ -2.04
SPB1YCL054W RPO26P20435 155 aa2.34□□□□□ -2.04
SPB1YCL054W PTP1P25044 335 aa2.34□□□□□ -2.04
SPB1YCL054W YCR043CP25361 127 aa2.34□□□□□ -2.04
SPB1YCL054W RRT12P25381 491 aa2.34□□□□□ -2.04
SPB1YCL054W HMT1P38074 348 aa2.34□□□□□ -2.04
SPB1YCL054W CHK1P38147 527 aa2.34□□□□□ -2.04
SPB1YCL054W MOB1P40484 314 aa2.34□□□□□ -2.04
SPB1YCL054W RSM25P40496 264 aa2.34□□□□□ -2.04
SPB1YCL054W COS10P52924 374 aa2.34□□□□□ -2.04
SPB1YCL054W YGR067CP53243 804 aa2.34□□□□□ -2.04
SPB1YCL054W NUP116Q02630 1113 aa2.34□□□□□ -2.04
SPB1YCL054W YDR415CQ04033 374 aaPredicted RBP2.34□□□□□ -2.04
SPB1YCL054W ERP1Q05359 219 aaKnown RBP2.34□□□□□ -2.04
SPB1YCL054W ABP140Q08641 628 aaKnown RBP2.34□□□□□ -2.04
SPB1YCL054W RAD3P06839 778 aa2.33□□□□□ -2.04
SPB1YCL054W ATR1P13090 542 aa2.33□□□□□ -2.04
SPB1YCL054W MRPL8P22353 238 aa2.33□□□□□ -2.04
SPB1YCL054W YNK1P36010 153 aaKnown RBP2.33□□□□□ -2.04
SPB1YCL054W PMU1P36069 295 aa2.33□□□□□ -2.04
SPB1YCL054W YHK8P38776 514 aa2.33□□□□□ -2.04
SPB1YCL054W GEP4P38812 185 aa2.33□□□□□ -2.04
SPB1YCL054W KEG1P43614 200 aa2.33□□□□□ -2.04
SPB1YCL054W SSN8P47821 323 aa2.33□□□□□ -2.04
SPB1YCL054W KAP114P53067 1004 aa2.33□□□□□ -2.04
SPB1YCL054W PXR1P53335 271 aaPredicted RBP2.33□□□□□ -2.04
SPB1YCL054W EBS1Q03466 884 aaKnown RBP2.33□□□□□ -2.04
SPB1YCL054W RVB1Q03940 463 aaKnown RBP2.33□□□□□ -2.04
SPB1YCL054W CDC123Q05791 360 aa2.33□□□□□ -2.04
SPB1YCL054W GGA1Q06336 557 aa2.33□□□□□ -2.04
SPB1YCL054W GRS2Q06817 618 aa2.33□□□□□ -2.04
SPB1YCL054W SNX3Q08826 162 aaKnown RBP2.33□□□□□ -2.04
SPB1YCL054W YLR108CQ12259 485 aa2.33□□□□□ -2.04
SPB1YCL054W HRT3Q12347 344 aa2.33□□□□□ -2.04
SPB1YCL054W RGS2Q99188 309 aa2.33□□□□□ -2.04
SPB1YCL054W UBA3Q99344 299 aa2.33□□□□□ -2.04
SPB1YCL054W ZRC1P20107 442 aa2.33□□□□□ -2.04
SPB1YCL054W PUT3P25502 979 aaPredicted RBP2.33□□□□□ -2.04
SPB1YCL054W DCC1P25559 380 aa2.33□□□□□ -2.04
SPB1YCL054W VMA5P31412 392 aaKnown RBP2.33□□□□□ -2.04
SPB1YCL054W YET1P35723 206 aa2.33□□□□□ -2.04
SPB1YCL054W RIB5P38145 238 aa2.33□□□□□ -2.04
SPB1YCL054W SHE3P38272 425 aaKnown RBP2.33□□□□□ -2.04
SPB1YCL054W ALG8P40351 577 aa2.33□□□□□ -2.04
SPB1YCL054W TES1P41903 349 aaKnown RBP2.33□□□□□ -2.04
SPB1YCL054W CPR7P47103 393 aa2.33□□□□□ -2.04
SPB1YCL054W TRM112P53738 135 aaPredicted RBP2.33□□□□□ -2.04
SPB1YCL054W MTQ1P53944 314 aa2.33□□□□□ -2.04
SPB1YCL054W DIA1P54005 336 aa2.33□□□□□ -2.04
SPB1YCL054W SPP2Q02521 185 aa2.33□□□□□ -2.04
SPB1YCL054W HER2Q03557 464 aa2.33□□□□□ -2.04
SPB1YCL054W PRM6Q04705 352 aa2.33□□□□□ -2.04
SPB1YCL054W SDO1Q07953 250 aaKnown RBP2.33□□□□□ -2.04
SPB1YCL054W YPL199CQ08954 240 aa2.33□□□□□ -2.04
SPB1YCL054W TAF10Q12030 206 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms