RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W YNL019CP53975 284 aa5.06□□□□□ -1.6
SHP1YBL058W YKR011CQ02209 353 aa5.06□□□□□ -1.6
SHP1YBL058W THP1Q08231 455 aa5.06□□□□□ -1.6
SHP1YBL058W HRT1Q08273 121 aa5.06□□□□□ -1.6
SHP1YBL058W WTM1Q12363 437 aaKnown RBP5.06□□□□□ -1.6
SHP1YBL058W SPO7P18410 259 aa5.05□□□□□ -1.6
SHP1YBL058W MNS1P32906 549 aa5.05□□□□□ -1.6
SHP1YBL058W NUF2P33895 451 aa5.05□□□□□ -1.6
SHP1YBL058W JEN1P36035 616 aa5.05□□□□□ -1.6
SHP1YBL058W YHR218WP38899 603 aa5.05□□□□□ -1.6
SHP1YBL058W RCY1P39531 840 aa5.05□□□□□ -1.6
SHP1YBL058W YER188WP40103 239 aa5.05□□□□□ -1.6
SHP1YBL058W VHR1P40522 640 aa5.05□□□□□ -1.6
SHP1YBL058W DPB11P47027 764 aaPredicted RBP5.05□□□□□ -1.6
SHP1YBL058W NIT3P49954 291 aa5.05□□□□□ -1.6
SHP1YBL058W SVL3Q03088 825 aaKnown RBP5.05□□□□□ -1.6
SHP1YBL058W CTS2Q06350 511 aa5.05□□□□□ -1.6
SHP1YBL058W TDA6Q06466 467 aa5.05□□□□□ -1.6
SHP1YBL058W MUM3Q08750 479 aa5.05□□□□□ -1.6
SHP1YBL058W FIT3Q08907 204 aa5.05□□□□□ -1.6
SHP1YBL058W RTR2Q12378 196 aa5.05□□□□□ -1.6
SHP1YBL058W MRX4Q12467 430 aa5.05□□□□□ -1.6
SHP1YBL058W YGR161W-CQ3E744 92 aa5.05□□□□□ -1.6
SHP1YBL058W RAD7P06779 565 aa5.04□□□□□ -1.6
SHP1YBL058W SED4P25365 1065 aa5.04□□□□□ -1.6
SHP1YBL058W RPS5P26783 225 aaKnown RBP5.04□□□□□ -1.6
SHP1YBL058W PRE2P30656 287 aaKnown RBP5.04□□□□□ -1.6
SHP1YBL058W ATP7P30902 174 aa5.04□□□□□ -1.6
SHP1YBL058W MDH3P32419 343 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SHP1YBL058W TOA1P32773 286 aa5.04□□□□□ -1.6
SHP1YBL058W PEX6P33760 1030 aa5.04□□□□□ -1.6
SHP1YBL058W YKL071WP36086 256 aa5.04□□□□□ -1.6
SHP1YBL058W TRM5P38793 499 aa5.04□□□□□ -1.6
SHP1YBL058W ALP1P38971 573 aa5.04□□□□□ -1.6
SHP1YBL058W NAB3P38996 802 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SHP1YBL058W MPH1P40562 993 aa5.04□□□□□ -1.6
SHP1YBL058W UBC13P52490 153 aa5.04□□□□□ -1.6
SHP1YBL058W DUG3P53871 357 aa5.04□□□□□ -1.6
SHP1YBL058W DBP9Q06218 594 aaKnown RBP5.04□□□□□ -1.6
SHP1YBL058W GAT3Q07928 141 aa5.04□□□□□ -1.6
SHP1YBL058W ULA1Q12059 462 aa5.04□□□□□ -1.6
SHP1YBL058W RDL1Q12305 139 aaKnown RBP5.04□□□□□ -1.6
SHP1YBL058W TY1A-NL1Q12391 440 aaKnown RBP5.04□□□□□ -1.6
SHP1YBL058W TIM9O74700 87 aa5.03□□□□□ -1.6
SHP1YBL058W SIR3P06701 978 aa5.03□□□□□ -1.6
SHP1YBL058W URE2P23202 354 aaKnown RBP5.03□□□□□ -1.6
SHP1YBL058W PPA2P28239 310 aa5.03□□□□□ -1.6
SHP1YBL058W PEX3P28795 441 aa5.03□□□□□ -1.6
SHP1YBL058W IDH1P28834 360 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
SHP1YBL058W ASF2P32448 525 aaPredicted RBP5.03□□□□□ -1.6
SHP1YBL058W YKL102CP34249 101 aa5.03□□□□□ -1.6
SHP1YBL058W TAT1P38085 619 aa5.03□□□□□ -1.6
SHP1YBL058W SRO77P38163 1010 aa5.03□□□□□ -1.6
SHP1YBL058W YBR096WP38256 230 aa5.03□□□□□ -1.6
SHP1YBL058W YER121WP40076 114 aa5.03□□□□□ -1.6
SHP1YBL058W IDS2P46958 469 aa5.03□□□□□ -1.6
SHP1YBL058W PEF1P53238 335 aa5.03□□□□□ -1.6
SHP1YBL058W YNL046WP53956 172 aa5.03□□□□□ -1.6
SHP1YBL058W SUB1P54000 292 aaKnown RBP5.03□□□□□ -1.6
SHP1YBL058W YMR102CQ03177 834 aa5.03□□□□□ -1.6
SHP1YBL058W PRM15Q03262 622 aa5.03□□□□□ -1.6
SHP1YBL058W SNT309Q06091 175 aaPredicted RBP5.03□□□□□ -1.6
SHP1YBL058W MSA1Q08471 629 aa5.03□□□□□ -1.6
SHP1YBL058W FSH3Q99369 266 aa5.03□□□□□ -1.6
SHP1YBL058W RPS23AP0CX29 145 aaKnown RBP5.02□□□□□ -1.61
SHP1YBL058W RPS23BP0CX30 145 aa5.02□□□□□ -1.61
SHP1YBL058W MSI1P13712 422 aa5.02□□□□□ -1.61
SHP1YBL058W DBF2P22204 572 aa5.02□□□□□ -1.61
SHP1YBL058W ERG4P25340 473 aa5.02□□□□□ -1.61
SHP1YBL058W CDC10P25342 322 aaKnown RBP5.02□□□□□ -1.61
SHP1YBL058W COQ2P32378 372 aa5.02□□□□□ -1.61
SHP1YBL058W CLB6P32943 380 aa5.02□□□□□ -1.61
SHP1YBL058W PAD1P33751 242 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
SHP1YBL058W NIC96P34077 839 aa5.02□□□□□ -1.61
SHP1YBL058W SPT10P35208 640 aa5.02□□□□□ -1.61
SHP1YBL058W RIB1P38066 345 aa5.02□□□□□ -1.61
SHP1YBL058W BAT2P47176 376 aaKnown RBP5.02□□□□□ -1.61
SHP1YBL058W YIP4P53093 235 aa5.02□□□□□ -1.61
SHP1YBL058W NCE103P53615 221 aa5.02□□□□□ -1.61
SHP1YBL058W COS1P53822 381 aa5.02□□□□□ -1.61
SHP1YBL058W YPL077CQ02831 240 aa5.02□□□□□ -1.61
SHP1YBL058W YMR279CQ03263 540 aa5.02□□□□□ -1.61
SHP1YBL058W UGO1Q03327 502 aa5.02□□□□□ -1.61
SHP1YBL058W DML1Q03652 475 aa5.02□□□□□ -1.61
SHP1YBL058W YDR387CQ04162 555 aa5.02□□□□□ -1.61
SHP1YBL058W SNO4Q04902 237 aa5.02□□□□□ -1.61
SHP1YBL058W GPI11Q06636 219 aa5.02□□□□□ -1.61
SHP1YBL058W SWA2Q06677 668 aa5.02□□□□□ -1.61
SHP1YBL058W SNA4Q07549 140 aa5.02□□□□□ -1.61
SHP1YBL058W HSP33Q08914 237 aaKnown RBP5.02□□□□□ -1.61
SHP1YBL058W HSP32Q08992 237 aa5.02□□□□□ -1.61
SHP1YBL058W IZH2Q12442 317 aa5.02□□□□□ -1.61
SHP1YBL058W ERP4Q12450 207 aa5.02□□□□□ -1.61
SHP1YBL058W MHF2Q3E829 80 aa5.02□□□□□ -1.61
SHP1YBL058W YOL162WP0CF19 215 aa5.01□□□□□ -1.61
SHP1YBL058W PRP28P23394 588 aa5.01□□□□□ -1.61
SHP1YBL058W LTV1P34078 463 aa5.01□□□□□ -1.61
SHP1YBL058W SHM2P37291 469 aaKnown RBP5.01□□□□□ -1.61
SHP1YBL058W YBR063CP38083 404 aa5.01□□□□□ -1.61
SHP1YBL058W HEK2P38199 381 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms