RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 UTP21Q06078 939 aaPredicted RBP7.94□□□□□ -1.14
LSR1LSR1 NMA1Q06178 401 aaKnown RBP7.94□□□□□ -1.14
LSR1LSR1 BRX1Q08235 291 aaKnown RBP7.94□□□□□ -1.14
LSR1LSR1 SOD2P00447 233 aa7.93□□□□□ -1.14
LSR1LSR1 REP2P03872 296 aa7.93□□□□□ -1.14
LSR1LSR1 ARG80P07249 177 aa7.93□□□□□ -1.14
LSR1LSR1 PRP2P20095 876 aaPredicted RBP7.93□□□□□ -1.14
LSR1LSR1 PRO1P32264 428 aa7.93□□□□□ -1.14
LSR1LSR1 NRP1P32770 719 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
LSR1LSR1 TIM12P32830 109 aa7.93□□□□□ -1.14
LSR1LSR1 TRR2P38816 342 aa7.93□□□□□ -1.14
LSR1LSR1 AIM46P38885 310 aa7.93□□□□□ -1.14
LSR1LSR1 MNL1P38888 796 aa7.93□□□□□ -1.14
LSR1LSR1 YER184CP39961 794 aa7.93□□□□□ -1.14
LSR1LSR1 QDR1P40475 563 aa7.93□□□□□ -1.14
LSR1LSR1 BAP3P41815 604 aa7.93□□□□□ -1.14
LSR1LSR1 YJR120WP47157 116 aa7.93□□□□□ -1.14
LSR1LSR1 SMA2Q04658 369 aa7.93□□□□□ -1.14
LSR1LSR1 SNO4Q04902 237 aa7.93□□□□□ -1.14
LSR1LSR1 YPR127WQ06494 345 aa7.93□□□□□ -1.14
LSR1LSR1 YPR084WQ06821 456 aa7.93□□□□□ -1.14
LSR1LSR1 HSP33Q08914 237 aaKnown RBP7.93□□□□□ -1.14
LSR1LSR1 HSP32Q08992 237 aa7.93□□□□□ -1.14
LSR1LSR1 LSO2Q3E772 92 aaKnown RBP7.93□□□□□ -1.14
LSR1LSR1 RPP1AP05318 106 aaPredicted RBP7.92□□□□□ -1.14
LSR1LSR1 ADK1P07170 222 aaKnown RBP7.92□□□□□ -1.14
LSR1LSR1 CNB1P25296 175 aa7.92□□□□□ -1.14
LSR1LSR1 RNQ1P25367 405 aa7.92□□□□□ -1.14
LSR1LSR1 SFK1P35735 353 aa7.92□□□□□ -1.14
LSR1LSR1 PEX32P38292 413 aa7.92□□□□□ -1.14
LSR1LSR1 EHT1P38295 451 aa7.92□□□□□ -1.14
LSR1LSR1 GRE3P38715 327 aaKnown RBP RIP-Chip data7.92□□□□□ -1.14not detected
LSR1LSR1 LYS1P38998 373 aaRIP-Chip data7.92□□□□□ -1.14not detected
LSR1LSR1 LSB3P43603 459 aaKnown RBP7.92□□□□□ -1.14
LSR1LSR1 SAY1P53324 424 aa7.92□□□□□ -1.14
LSR1LSR1 RNH70P53331 553 aa7.92□□□□□ -1.14
LSR1LSR1 KAP120Q02932 1032 aa7.92□□□□□ -1.14
LSR1LSR1 SSY1Q03770 852 aa7.92□□□□□ -1.14
LSR1LSR1 YDR444WQ04093 687 aa7.92□□□□□ -1.14
LSR1LSR1 VBA1Q04301 562 aa7.92□□□□□ -1.14
LSR1LSR1 DCR2Q05924 578 aa7.92□□□□□ -1.14
LSR1LSR1 BTS1Q12051 335 aa7.92□□□□□ -1.14
LSR1LSR1 LEU9Q12166 604 aaKnown RBP7.92□□□□□ -1.14
LSR1LSR1 FSH3Q99369 266 aa7.92□□□□□ -1.14
LSR1LSR1 GAL4P04386 881 aa7.91□□□□□ -1.14
LSR1LSR1 BET2P20133 325 aa7.91□□□□□ -1.14
LSR1LSR1 SRB6P32570 121 aa7.91□□□□□ -1.14
LSR1LSR1 PDC2P32896 925 aa7.91□□□□□ -1.14
LSR1LSR1 MDL1P33310 695 aa7.91□□□□□ -1.14
LSR1LSR1 WSC4P38739 605 aa7.91□□□□□ -1.14
LSR1LSR1 OSH7P38755 437 aa7.91□□□□□ -1.14
LSR1LSR1 YIL166CP40445 542 aa7.91□□□□□ -1.14
LSR1LSR1 YIL108WP40483 696 aaKnown RBP7.91□□□□□ -1.14
LSR1LSR1 FMP48P53233 369 aa7.91□□□□□ -1.14
LSR1LSR1 YNR062CP53748 327 aa7.91□□□□□ -1.14
LSR1LSR1 HPF1Q05164 967 aa7.91□□□□□ -1.14
LSR1LSR1 RBS1Q05672 457 aaKnown RBP7.91□□□□□ -1.14
LSR1LSR1 PEX30Q06169 523 aa7.91□□□□□ -1.14
LSR1LSR1 YPR091CQ06833 770 aa7.91□□□□□ -1.14
LSR1LSR1 TMS1Q12116 473 aa7.91□□□□□ -1.14
LSR1LSR1 PRM4Q12498 284 aa7.91□□□□□ -1.14
LSR1LSR1 CET1O13297 549 aaPredicted RBP7.9□□□□□ -1.14
LSR1LSR1 AI1P03875 834 aa7.9□□□□□ -1.14
LSR1LSR1 FUS3P16892 353 aaKnown RBP7.9□□□□□ -1.14
LSR1LSR1 YPK2P18961 677 aa7.9□□□□□ -1.14
LSR1LSR1 ERG4P25340 473 aa7.9□□□□□ -1.14
LSR1LSR1 PRE2P30656 287 aaKnown RBP7.9□□□□□ -1.14
LSR1LSR1 SPT23P35210 1082 aa7.9□□□□□ -1.14
LSR1LSR1 NSG1P38837 291 aa7.9□□□□□ -1.14
LSR1LSR1 PAC1P39946 494 aaKnown RBP7.9□□□□□ -1.14
LSR1LSR1 ALK1P43633 760 aaKnown RBP7.9□□□□□ -1.14
LSR1LSR1 LYS20P48570 428 aaKnown RBP7.9□□□□□ -1.14
LSR1LSR1 CAF40P53829 373 aa7.9□□□□□ -1.14
LSR1LSR1 GIM3P53900 129 aa7.9□□□□□ -1.14
LSR1LSR1 TY1A-MR1Q04215 440 aa7.9□□□□□ -1.14
LSR1LSR1 DXO1Q06349 442 aa7.9□□□□□ -1.14
LSR1LSR1 HDA2Q06629 674 aa7.9□□□□□ -1.14
LSR1LSR1 IRC13Q08630 104 aa7.9□□□□□ -1.14
LSR1LSR1 LYS21Q12122 440 aaKnown RBP7.9□□□□□ -1.14
LSR1LSR1 YLR108CQ12259 485 aa7.9□□□□□ -1.14
LSR1LSR1 TY1A-BLQ12266 440 aa7.9□□□□□ -1.14
LSR1LSR1 RDI1Q12434 202 aa7.9□□□□□ -1.14
LSR1LSR1 AAC1P04710 309 aa7.89□□□□□ -1.15
LSR1LSR1 GCD1P09032 578 aaPredicted RBP7.89□□□□□ -1.15
LSR1LSR1 CNE1P27825 502 aa7.89□□□□□ -1.15
LSR1LSR1 CDC13P32797 924 aaKnown RBP7.89□□□□□ -1.15
LSR1LSR1 PFS1P38872 237 aa7.89□□□□□ -1.15
LSR1LSR1 SKN7P38889 622 aa7.89□□□□□ -1.15
LSR1LSR1 PRP39P39682 629 aaKnown RBP7.89□□□□□ -1.15
LSR1LSR1 VPS52P39904 641 aa7.89□□□□□ -1.15
LSR1LSR1 OYE3P41816 400 aaPredicted RBP7.89□□□□□ -1.15
LSR1LSR1 SFH5P47008 294 aa7.89□□□□□ -1.15
LSR1LSR1 NUP42P49686 430 aaKnown RBP7.89□□□□□ -1.15
LSR1LSR1 PHB2P50085 310 aa7.89□□□□□ -1.15
LSR1LSR1 YGL204CP53089 101 aa7.89□□□□□ -1.15
LSR1LSR1 VHT1P53241 593 aa7.89□□□□□ -1.15
LSR1LSR1 TY1A-DR2Q03964 440 aaKnown RBP7.89□□□□□ -1.15
LSR1LSR1 UTP15Q04305 513 aaKnown RBP7.89□□□□□ -1.15
LSR1LSR1 YEH1Q07804 573 aa7.89□□□□□ -1.15
LSR1LSR1 YOR365CQ08844 703 aa7.89□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms