RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 KIF1BPQ96EK5 621 aa8.54□□□□□ -1.04
SENP3-210ENST00000619785 WDR11Q9BZH6 1224 aa8.54□□□□□ -1.04
SENP3-210ENST00000619785 UPF3BQ9BZI7 483 aaKnown RBP8.54□□□□□ -1.04
SENP3-210ENST00000619785 TNKS2Q9H2K2 1166 aa8.54□□□□□ -1.04
SENP3-210ENST00000619785 RANBP17Q9H2T7 1088 aaKnown RBP8.54□□□□□ -1.04
SENP3-210ENST00000619785 EPB41L4AQ9HCS5 686 aaPredicted RBP8.54□□□□□ -1.04
SENP3-210ENST00000619785 CLIP2Q9UDT6 1046 aa8.54□□□□□ -1.04
SENP3-210ENST00000619785 ADD3Q9UEY8 706 aaKnown RBP8.54□□□□□ -1.04
SENP3-210ENST00000619785 PCDHA4Q9UN74 947 aa8.54□□□□□ -1.04
SENP3-210ENST00000619785 FAM50BQ9Y247 325 aa8.54□□□□□ -1.04
SENP3-210ENST00000619785 EXOC6BQ9Y2D4 811 aa8.54□□□□□ -1.04
SENP3-210ENST00000619785 PRKAB1Q9Y478 270 aa8.54□□□□□ -1.04
SENP3-210ENST00000619785 INSL6Q9Y581 213 aa8.54□□□□□ -1.04
SENP3-210ENST00000619785 SLC4A4Q9Y6R1 1079 aa8.54□□□□□ -1.04
SENP3-210ENST00000619785 KMT2BQ9UMN6 2715 aaPredicted RBP8.54□□□□□ -1.04
SENP3-210ENST00000619785 FANCMQ8IYD8 2048 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 LOXHD1Q8IVV2 1947 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 C5orf67F2Z3F1 127 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 HAS3O00219 553 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 C2CD2LO14523 706 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 RGS9O75916 674 aaPredicted RBP8.53□□□□□ -1.04
SENP3-210ENST00000619785 ATE1O95260 518 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 CHGBP05060 677 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 CYP11A1P05108 521 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 EPHA1P21709 976 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 CDC25BP30305 580 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 HOXC8P31273 242 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 MBTPS1Q14703 1052 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 CBX2Q14781 532 aaPredicted RBP8.53□□□□□ -1.04
SENP3-210ENST00000619785 SLFN13Q68D06 897 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 KANK3Q6NY19 840 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 LRRC8DQ7L1W4 858 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 PDZD3Q86UT5 571 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 CLASRPQ8N2M8 674 aaKnown RBP8.53□□□□□ -1.04
SENP3-210ENST00000619785 C19orf47Q8N9M1 422 aaKnown RBP8.53□□□□□ -1.04
SENP3-210ENST00000619785 DNERQ8NFT8 737 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 SCFD2Q8WU76 684 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 KAT2BQ92831 832 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 EDAQ92838 391 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 CORO1BQ9BR76 489 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 BRINP2Q9C0B6 783 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 TMX1Q9H3N1 280 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 ZNF287Q9HBT7 754 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 GTF2IRD1Q9UHL9 959 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 POLR3KQ9Y2Y1 108 aaPredicted RBP8.53□□□□□ -1.04
SENP3-210ENST00000619785 DDX49Q9Y6V7 483 aaKnown RBP8.53□□□□□ -1.04
SENP3-210ENST00000619785 VPS13AQ96RL7 3174 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 MYO10Q9HD67 2058 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 PLXNA4Q9HCM2 1894 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 RAD50Q92878 1312 aa8.53□□□□□ -1.04
SENP3-210ENST00000619785 DNAH14Q0VDD8 3507 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 ADARB2-AS1A8MUL3 147 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 TMEM232C9JQI7 657 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 PPFIA3O75145 1194 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 ARAFP10398 606 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 CKBP12277 381 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 ALAS2P22557 587 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 PTGISQ16647 500 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 BRDTQ58F21 947 aaPredicted RBP8.52□□□□□ -1.05
SENP3-210ENST00000619785 RCSD1Q6JBY9 416 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 ZSCAN25Q6NSZ9 544 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.52□□□□□ -1.05
SENP3-210ENST00000619785 NOL8Q76FK4 1167 aaKnown RBP8.52□□□□□ -1.05
SENP3-210ENST00000619785 OR6J1Q8NGC5 347 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 CLEC4DQ8WXI8 215 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 ANKS1AQ92625 1134 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 TM9SF2Q99805 663 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 C17orf80Q9BSJ5 609 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 FTOQ9C0B1 505 aaKnown RBP eCLIP8.52□□□□□ -1.05
SENP3-210ENST00000619785 SOX17Q9H6I2 414 aaPredicted RBP8.52□□□□□ -1.05
SENP3-210ENST00000619785 RC3H2Q9HBD1 1191 aaKnown RBP8.52□□□□□ -1.05
SENP3-210ENST00000619785 IL1RAPL2Q9NP60 686 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 HOMER2Q9NSB8 354 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.52□□□□□ -1.05
SENP3-210ENST00000619785 COL4A3BPQ9Y5P4 624 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 CACNA1BQ00975 2339 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 LAMA4Q16363 1823 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 EMSYQ7Z589 1322 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 WDR19Q8NEZ3 1342 aa8.52□□□□□ -1.05
SENP3-210ENST00000619785 ESYT3A0FGR9 886 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 MBTPS2O43462 519 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 RAB11FIP3O75154 756 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 GJB6O95452 261 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 EYA4O95677 639 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 F2P00734 622 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 MMP3P08254 477 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 MYL3P08590 195 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 ALAS1P13196 640 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 PPP2R5BQ15173 497 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 EPC2Q52LR7 807 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 ARSHQ5FYA8 562 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 WIPI1Q5MNZ9 446 aaPredicted RBP8.51□□□□□ -1.05
SENP3-210ENST00000619785 RUFY4Q6ZNE9 571 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 EEPD1Q7L9B9 569 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 TMCO2Q7Z6W1 182 aaPredicted RBP8.51□□□□□ -1.05
SENP3-210ENST00000619785 SIRT2Q8IXJ6 389 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 IL22RA1Q8N6P7 574 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 ZSCAN1Q8NBB4 408 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 TTC9Q92623 222 aa8.51□□□□□ -1.05
SENP3-210ENST00000619785 LMAN2LQ9H0V9 348 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms