RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 MBOAT7Q96N66 472 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 INO80BQ9C086 356 aaPredicted RBP6.86□□□□□ -1.31
SNX13-213ENST00000611725 ISCUQ9H1K1 167 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 GANQ9H2C0 597 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 ACAD9Q9H845 621 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 GPRC5CQ9NQ84 441 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 TRPC6Q9Y210 931 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 FAM169AQ9Y6X4 670 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 ATF7P17544 494 aaPredicted RBP6.85□□□□□ -1.31
SNX13-213ENST00000611725 MAN1A1P33908 653 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 AARSP49588 968 aaKnown RBP eCLIP6.85□□□□□ -1.31
SNX13-213ENST00000611725 COG2Q14746 738 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 SPDYE2Q495Y8 402 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 PLA2G4FQ68DD2 849 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 SLFN12LQ6IEE8 588 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 XRRA1Q6P2D8 792 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 SRLQ86TD4 932 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 PURBQ96QR8 312 aaKnown RBP6.85□□□□□ -1.31
SNX13-213ENST00000611725 TRIM51Q9BSJ1 452 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 TIPINQ9BVW5 301 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 DEFB129Q9H1M3 183 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 MRPL47Q9HD33 250 aaKnown RBP6.85□□□□□ -1.31
SNX13-213ENST00000611725 OSGEPQ9NPF4 335 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 UVRAGQ9P2Y5 699 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 FBXO40Q9UH90 709 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 PHRF1Q9P1Y6 1649 aaKnown RBP6.85□□□□□ -1.31
SNX13-213ENST00000611725 UBE4BO95155 1302 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 FAM187AA6NFU0 413 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 CCND2P30279 289 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 ERVK-9P63128 1117 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 EEPD1Q7L9B9 569 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 RPUSD2Q8IZ73 545 aaKnown RBP6.85□□□□□ -1.31
SNX13-213ENST00000611725 PAIP2Q9BPZ3 127 aaKnown RBP6.85□□□□□ -1.31
SNX13-213ENST00000611725 THAP2Q9H0W7 228 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 RPAP3Q9H6T3 665 aaPredicted RBP6.85□□□□□ -1.31
SNX13-213ENST00000611725 ANKEF1Q9NU02 776 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 INTS9Q9NV88 658 aaKnown RBP6.85□□□□□ -1.31
SNX13-213ENST00000611725 HOXC10Q9NYD6 342 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 SNED1Q8TER0 1413 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 MAFGO15525 162 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 ABCD1P33897 745 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 NOVP48745 357 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 IFT88Q13099 833 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 TKFCQ3LXA3 575 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 LMBRD2Q68DH5 695 aaPredicted RBP6.85□□□□□ -1.31
SNX13-213ENST00000611725 MICALL2Q8IY33 904 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 EFCAB13Q8IY85 973 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 MSTO1Q9BUK6 570 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 CAPN7Q9Y6W3 813 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 TMOD1P28289 359 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 IRX5P78411 483 aaPredicted RBP6.85□□□□□ -1.31
SNX13-213ENST00000611725 SF3A3Q12874 501 aaKnown RBP eCLIP6.85□□□□□ -1.31
SNX13-213ENST00000611725 STXBP2Q15833 593 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 NBPF9Q3BBW0 867 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 KIAA1755Q5JYT7 1200 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 TMEM270Q6UE05 265 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 NCAPG2Q86XI2 1143 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 RAB20Q9NX57 234 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 PPP1R9AQ9ULJ8 1098 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 ATF2P15336 505 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 KRT15P19012 456 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 SLC12A3P55017 1021 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 LACTBP83111 547 aaPredicted RBP6.85□□□□□ -1.31
SNX13-213ENST00000611725 GUCY1A3Q02108 690 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 ENOSF1Q7L5Y1 443 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 JAMLQ86YT9 394 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 SULF1Q8IWU6 871 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 CDAN1Q8IWY9 1227 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 MORC4Q8TE76 937 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 WDR18Q9BV38 432 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 GLIS2Q9BZE0 524 aaPredicted RBP6.85□□□□□ -1.31
SNX13-213ENST00000611725 JPH1Q9HDC5 661 aaPredicted RBP6.85□□□□□ -1.31
SNX13-213ENST00000611725 ASTN1O14525 1302 aa6.85□□□□□ -1.31
SNX13-213ENST00000611725 LRRD1A4D1F6 860 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 THAP12O43422 761 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 ZBTB7AO95365 584 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 GZMAP12544 262 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 ITGA4P13612 1032 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 MIS18BP1Q6P0N0 1132 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 SEPT14Q6ZU15 432 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 CEP128Q6ZU80 1094 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 PHLDB2Q86SQ0 1253 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 PNMA8AQ86V59 439 aaPredicted RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 ANKRD42Q8N9B4 389 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 BBOF1Q8ND07 529 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 ACTRT1Q8TDG2 376 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 SLC16A10Q8TF71 515 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 LENG9Q96B70 501 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 CHORDC1Q9UHD1 332 aaPredicted RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 VAV3Q9UKW4 847 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 PIK3CAP42336 1068 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 TFAMQ00059 246 aaKnown RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 PPP1R2P3Q6NXS1 205 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 THNSL1Q8IYQ7 743 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 OR2W6PQ8NHA6 318 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 TAS1R2Q8TE23 839 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 JPH2Q9BR39 696 aaPredicted RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 CELF4Q9BZC1 486 aaKnown RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 IQCGQ9H095 443 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms