RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 MECOMQ03112 1051 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 ACTN3Q08043 901 aaPredicted RBP8.26□□□□□ -1.09
LMBR1-221ENST00000609774 NEDD9Q14511 834 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 PDIA5Q14554 519 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 RPS6KA1Q15418 735 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 ASIC2Q16515 512 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 SKIDA1Q1XH10 827 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 INF2Q27J81 1249 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 CCDC40Q4G0X9 1142 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 TTMPQ5BVD1 217 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 NAA35Q5VZE5 725 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 KRT79Q5XKE5 535 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 NFRKBQ6P4R8 1299 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 USP17L2Q6R6M4 530 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 ANKRD33Q7Z3H0 272 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 DZIP1Q86YF9 867 aaKnown RBP8.26□□□□□ -1.09
LMBR1-221ENST00000609774 MYOCDQ8IZQ8 938 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 MAGEC3Q8TD91 643 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 IFT81Q8WYA0 676 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 NSUN4Q96CB9 384 aaKnown RBP8.26□□□□□ -1.09
LMBR1-221ENST00000609774 SPZ1Q9BXG8 430 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 ISCUQ9H1K1 167 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 VCPKMTQ9H867 229 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 MLXIPQ9HAP2 919 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 MKNK2Q9HBH9 465 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 FAM207AQ9NSI2 230 aaPredicted RBP8.26□□□□□ -1.09
LMBR1-221ENST00000609774 RAPGEFL1Q9UHV5 662 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 DMGDHQ9UI17 866 aaKnown RBP8.26□□□□□ -1.09
LMBR1-221ENST00000609774 PHF24Q9UPV7 400 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 DIS3Q9Y2L1 958 aaKnown RBP8.26□□□□□ -1.09
LMBR1-221ENST00000609774 SMCHD1A6NHR9 2005 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 GMNCA6NCL1 334 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 FAM196BA6NMK8 535 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 KBTBD13C9JR72 458 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 E7EVH7 732 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 STXBP3O00186 592 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 CCNT1O60563 726 aaKnown RBP8.25□□□□□ -1.09
LMBR1-221ENST00000609774 TSPY3P0CV98 308 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 TSPY8P0CW00 308 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 GHRP10912 638 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 BMP1P13497 986 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 EZRP15311 586 aaKnown RBP8.25□□□□□ -1.09
LMBR1-221ENST00000609774 ITGB8P26012 769 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 CALRP27797 417 aaKnown RBP8.25□□□□□ -1.09
LMBR1-221ENST00000609774 GBP1P32455 592 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 NAPAP54920 295 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 PPP4CP60510 307 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 DYNLL1P63167 89 aaKnown RBP8.25□□□□□ -1.09
LMBR1-221ENST00000609774 JAG1P78504 1218 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 SLC7A5Q01650 507 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 TFAP4Q01664 338 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 ATP2B2Q01814 1243 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 STK4Q13043 487 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 PDCLQ13371 301 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 PICALMQ13492 652 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 HLTFQ14527 1009 aaKnown RBP eCLIP8.25□□□□□ -1.09
LMBR1-221ENST00000609774 SNCBQ16143 134 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 SLC18A3Q16572 532 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 TRIM60Q495X7 471 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 ODF2Q5BJF6 829 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 CEP85LQ5SZL2 805 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 MEI1Q5TIA1 1274 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 KLHDC7AQ5VTJ3 777 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 CATSPERGQ6ZRH7 1159 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 HOOK3Q86VS8 718 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 CCDC65Q8IXS2 484 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 CACNA2D3Q8IZS8 1091 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 ABRAQ8N0Z2 381 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 TSEN2Q8NCE0 465 aaKnown RBP8.25□□□□□ -1.09
LMBR1-221ENST00000609774 SHCBP1Q8NEM2 672 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 NPLOC4Q8TAT6 608 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 ZNF516Q92618 1163 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 ARL8AQ96BM9 186 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 RNPC3Q96LT9 517 aaKnown RBP8.25□□□□□ -1.09
LMBR1-221ENST00000609774 CCDC114Q96M63 670 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 CCT8L2Q96SF2 557 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 UHRF1Q96T88 793 aaPredicted RBP8.25□□□□□ -1.09
LMBR1-221ENST00000609774 NAP1L3Q99457 506 aaPredicted RBP8.25□□□□□ -1.09
LMBR1-221ENST00000609774 TLR10Q9BXR5 811 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 ZMYND12Q9H0C1 365 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 NT5C3AQ9H0P0 336 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 STMN4Q9H169 189 aaPredicted RBP8.25□□□□□ -1.09
LMBR1-221ENST00000609774 CXorf56Q9H5V9 222 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 SLITRK6Q9H5Y7 841 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 DNAJC18Q9H819 358 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 TMBIM4Q9HC24 238 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 DCP1AQ9NPI6 582 aaPredicted RBP8.25□□□□□ -1.09
LMBR1-221ENST00000609774 FAM114A2Q9NRY5 505 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 RBM12Q9NTZ6 932 aaKnown RBP8.25□□□□□ -1.09
LMBR1-221ENST00000609774 CXXC1Q9P0U4 656 aaPredicted RBP8.25□□□□□ -1.09
LMBR1-221ENST00000609774 NFU1Q9UMS0 254 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 ATP11BQ9Y2G3 1177 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 PCDHGC5Q9Y5F6 944 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 COL4A3BPQ9Y5P4 624 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 DUSP10Q9Y6W6 482 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 A0A0G2JMZ2 1700 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 FLT1P17948 1338 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 KDM3AQ9Y4C1 1321 aa8.25□□□□□ -1.09
LMBR1-221ENST00000609774 MUC6Q6W4X9 2439 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 PLXNA1Q9UIW2 1896 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms