RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 CDCA2Q69YH5 1023 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-207ENST00000566095 CCSAPQ6IQ19 270 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-207ENST00000566095 ARMCX5Q6P1M9 558 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 ZPBP2Q6X784 338 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 APTXQ7Z2E3 356 aaKnown RBP10.76□□□□□ -0.69
SF3B3-207ENST00000566095 FILIP1Q7Z7B0 1213 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 IFNLR1Q8IU57 520 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-207ENST00000566095 VSTM4Q8IW00 320 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 NELFCDQ8IXH7 590 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 C12orf56Q8IXR9 622 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 LRRC71Q8N4P6 559 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 CCDC51Q96ER9 411 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 ZNF333Q96JL9 665 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 NLRP4Q96MN2 994 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 DEFB118Q96PH6 123 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 ADPGKQ9BRR6 497 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 MKNK1Q9BUB5 465 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 OGDHLQ9ULD0 1010 aa10.76□□□□□ -0.69
SF3B3-207ENST00000566095 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.76□□□□□ -0.69
SF3B3-207ENST00000566095 MYADML2A6NDP7 307 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 INO80B-WBP1J3KQ70 363 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 STX10O60499 249 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 PIGRP01833 764 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 PRKCBP05771 671 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 SRGAP2CP0DJJ0 459 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 KRT13P13646 458 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 GARTP22102 1010 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 MSNP26038 577 aaKnown RBP10.75□□□□□ -0.69
SF3B3-207ENST00000566095 AXLP30530 894 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 HOXC8P31273 242 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 PSMC2P35998 433 aaKnown RBP10.75□□□□□ -0.69
SF3B3-207ENST00000566095 MATR3P43243 847 aaKnown RBP eCLIP10.75□□□□□ -0.69
SF3B3-207ENST00000566095 STX17P56962 302 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 PTENP60484 403 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 PTK7Q13308 1070 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 PTGISQ16647 500 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 FAM187BQ17R55 369 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 CCDC40Q4G0X9 1142 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 SPECC1LQ69YQ0 1117 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 RPAINQ86UA6 219 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 SLC9A9Q8IVB4 645 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 LINC01465Q8N7H1 131 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 ASAP3Q8TDY4 903 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 TRAPPC12Q8WVT3 735 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 NUP58Q9BVL2 599 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 STRA6Q9BX79 667 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 NAA15Q9BXJ9 866 aaKnown RBP10.75□□□□□ -0.69
SF3B3-207ENST00000566095 SRRTQ9BXP5 876 aaKnown RBP10.75□□□□□ -0.69
SF3B3-207ENST00000566095 EDEM3Q9BZQ6 932 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 XPO4Q9C0E2 1151 aaKnown RBP10.75□□□□□ -0.69
SF3B3-207ENST00000566095 KCTD10Q9H3F6 313 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 RTN4Q9NQC3 1192 aaKnown RBP10.75□□□□□ -0.69
SF3B3-207ENST00000566095 IFNKQ9P0W0 207 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 PCDH10Q9P2E7 1040 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 SCN10AQ9Y5Y9 1956 aa10.75□□□□□ -0.69
SF3B3-207ENST00000566095 A0A1W2PQ45 241 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-207ENST00000566095 A0A1W2PQY0 241 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 ARVCFO00192 962 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 ACKR2O00590 384 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 MAPK13O15264 365 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 PARNO95453 639 aaKnown RBP10.74□□□□□ -0.69
SF3B3-207ENST00000566095 SGPL1O95470 568 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 NR3C1P04150 777 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 PTGS1P23219 599 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 NR2F2P24468 414 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 PBX1P40424 430 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 MTIF2P46199 727 aaKnown RBP10.74□□□□□ -0.69
SF3B3-207ENST00000566095 GPC3P51654 580 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 CRYBB1P53674 252 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-207ENST00000566095 ADAM17P78536 824 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 CETN1Q12798 172 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 BFSP2Q13515 415 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 PRPF4BQ13523 1007 aaKnown RBP10.74□□□□□ -0.69
SF3B3-207ENST00000566095 MARCH8Q5T0T0 291 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 FKBP15Q5T1M5 1219 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 ANKRD40Q6AI12 368 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 SERINC5Q86VE9 423 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 KIAA0319LQ8IZA0 1049 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 USP38Q8NB14 1042 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 CAGE1Q8TC20 777 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 POMGNT1Q8WZA1 660 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 HPS3Q969F9 1004 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 FIZ1Q96SL8 496 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 FAM49AQ9H0Q0 323 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-207ENST00000566095 AGPAT3Q9NRZ7 376 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 TRPV2Q9Y5S1 764 aa10.74□□□□□ -0.69
SF3B3-207ENST00000566095 LGALS16A8MUM7 142 aa10.73□□□□□ -0.69
SF3B3-207ENST00000566095 KCNJ18B7U540 433 aa10.73□□□□□ -0.69
SF3B3-207ENST00000566095 N4BP3O15049 544 aa10.73□□□□□ -0.69
SF3B3-207ENST00000566095 CLDN3O15551 220 aa10.73□□□□□ -0.69
SF3B3-207ENST00000566095 TREHO43280 583 aa10.73□□□□□ -0.69
SF3B3-207ENST00000566095 CCP110O43303 1012 aa10.73□□□□□ -0.69
SF3B3-207ENST00000566095 EXOC3O60645 756 aa10.73□□□□□ -0.69
SF3B3-207ENST00000566095 N4BP1O75113 896 aaKnown RBP10.73□□□□□ -0.69
SF3B3-207ENST00000566095 TOM1L1O75674 476 aa10.73□□□□□ -0.69
SF3B3-207ENST00000566095 VTNP04004 478 aa10.73□□□□□ -0.69
SF3B3-207ENST00000566095 TPM1P09493 284 aa10.73□□□□□ -0.69
SF3B3-207ENST00000566095 ATP1A3P13637 1013 aa10.73□□□□□ -0.69
SF3B3-207ENST00000566095 GJA8P48165 433 aa10.73□□□□□ -0.69
SF3B3-207ENST00000566095 CASP5P51878 434 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms