RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 ATCAYQ86WG3 371 aa9.03□□□□□ -0.96
PSEN1-215ENST00000556011 MIB2Q96AX9 1013 aa9.03□□□□□ -0.96
PSEN1-215ENST00000556011 NSUN4Q96CB9 384 aaKnown RBP9.03□□□□□ -0.96
PSEN1-215ENST00000556011 NUP88Q99567 741 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-215ENST00000556011 NT5C3AQ9H0P0 336 aa9.03□□□□□ -0.96
PSEN1-215ENST00000556011 GSX1Q9H4S2 264 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-215ENST00000556011 CAPN10Q9HC96 672 aa9.03□□□□□ -0.96
PSEN1-215ENST00000556011 ARHGEF10LQ9HCE6 1279 aa9.03□□□□□ -0.96
PSEN1-215ENST00000556011 AATFQ9NY61 560 aaKnown RBP eCLIP9.03□□□□□ -0.96
PSEN1-215ENST00000556011 ESPL1Q14674 2120 aa9.02□□□□□ -0.96
PSEN1-215ENST00000556011 CEP192Q8TEP8 1941 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 SPATA31D3P0C874 917 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 HOXC8P31273 242 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 CSTF2P33240 577 aaKnown RBP eCLIP9.02□□□□□ -0.97
PSEN1-215ENST00000556011 PTGER3P43115 390 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 SARSP49591 514 aaKnown RBP9.02□□□□□ -0.97
PSEN1-215ENST00000556011 METAP2P50579 478 aaKnown RBP eCLIP9.02□□□□□ -0.97
PSEN1-215ENST00000556011 TARDBPQ13148 414 aaKnown RBP eCLIP9.02□□□□□ -0.97
PSEN1-215ENST00000556011 TSHZ1Q6ZSZ6 1077 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 SPATA31D4Q6ZUB0 917 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 SLC34A3Q8N130 599 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 CAMKK1Q8N5S9 505 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 BAHD1Q8TBE0 780 aaPredicted RBP9.02□□□□□ -0.97
PSEN1-215ENST00000556011 KCNE4Q8WWG9 221 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 FTHL17Q9BXU8 183 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 SLC25A18Q9H1K4 315 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 RNF39Q9H2S5 420 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 RNF146Q9NTX7 359 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 CUEDC1Q9NWM3 386 aaPredicted RBP9.02□□□□□ -0.97
PSEN1-215ENST00000556011 CYP39A1Q9NYL5 469 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 NUDCQ9Y266 331 aa9.02□□□□□ -0.97
PSEN1-215ENST00000556011 CD99P14209 185 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 CD97P48960 835 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 ALDH5A1P51649 535 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-215ENST00000556011 GSTO1P78417 241 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 MGAT3Q09327 533 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 LY6KQ17RY6 165 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 SKOR2Q2VWA4 1001 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-215ENST00000556011 TANGO2Q6ICL3 276 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 GRASPQ7Z6J2 395 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-215ENST00000556011 DHX40Q8IX18 779 aaKnown RBP9.01□□□□□ -0.97
PSEN1-215ENST00000556011 ITFG1Q8TB96 612 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 ZNF564Q8TBZ8 553 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-215ENST00000556011 LPIN2Q92539 896 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 CLSTN3Q9BQT9 956 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 EMILIN2Q9BXX0 1053 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 RNPEPQ9H4A4 650 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 SH2D4AQ9H788 454 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 SLC38A10Q9HBR0 1119 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 ZNF334Q9HCZ1 680 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-215ENST00000556011 SSUH2Q9Y2M2 353 aa9.01□□□□□ -0.97
PSEN1-215ENST00000556011 TNFRSF10BO14763 440 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 ZNF862O60290 1169 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 DDAH2O95865 285 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 GH1P01241 217 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 SERPINF2P08697 491 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 RARAP10276 462 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 SOX9P48436 509 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 PTH1RQ03431 593 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 USP49Q70CQ1 688 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 PRPF38AQ8NAV1 312 aaKnown RBP9□□□□□ -0.97
PSEN1-215ENST00000556011 PIGOQ8TEQ8 1089 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 TMEM169Q96HH4 297 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 GAD1Q99259 594 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 TTPALQ9BTX7 342 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 EHD4Q9H223 541 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 MYH16Q9H6N6 1097 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 PILRBQ9UKJ0 227 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9□□□□□ -0.97
PSEN1-215ENST00000556011 KAT6AQ92794 2004 aa9□□□□□ -0.97
PSEN1-215ENST00000556011 COL1A2P08123 1366 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 ZNF316A6NFI3 1004 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-215ENST00000556011 CHL1O00533 1208 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 PAPLNO95428 1278 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 SMIM10L2AP0DMW4 78 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 SMIM10L2BP0DMW5 78 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 ITPKAP23677 461 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 HNF1BP35680 557 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 ICA1Q05084 483 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 CCINQ13939 588 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 GRM4Q14833 912 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 DUOXA1Q1HG43 343 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 CCDC62Q6P9F0 684 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 TXNDC11Q6PKC3 985 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 C11orf74Q86VG3 221 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 TMEM173Q86WV6 379 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-215ENST00000556011 DAGLBQ8NCG7 672 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 IRF7Q92985 503 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 KIFC2Q96AC6 838 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 TMUB1Q9BVT8 246 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 PRKD2Q9BZL6 878 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 RTN4Q9NQC3 1192 aaKnown RBP8.99□□□□□ -0.97
PSEN1-215ENST00000556011 LAS1LQ9Y4W2 734 aaKnown RBP8.99□□□□□ -0.97
PSEN1-215ENST00000556011 MGAM2Q2M2H8 2515 aa8.99□□□□□ -0.97
PSEN1-215ENST00000556011 PTPDC1A2A3K4 754 aa8.98□□□□□ -0.97
PSEN1-215ENST00000556011 N4BP3O15049 544 aa8.98□□□□□ -0.97
PSEN1-215ENST00000556011 SSBP05455 408 aaKnown RBP eCLIP8.98□□□□□ -0.97
PSEN1-215ENST00000556011 POLGP54098 1239 aaPredicted RBP8.98□□□□□ -0.97
PSEN1-215ENST00000556011 INHBCP55103 352 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms