RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 PTPN21Q16825 1174 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 ALDH8A1Q9H2A2 487 aaPredicted RBP17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 EHD2Q9NZN4 543 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 TRPM1Q7Z4N2 1603 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 RASGRF2O14827 1237 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 CYBBP04839 570 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 ITPRIPL1Q6GPH6 555 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 XRRA1Q6P2D8 792 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 INTS2Q9H0H0 1204 aaKnown RBP17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 SP110Q9HB58 689 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 PRR12Q9ULL5 1215 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 HEY1Q9Y5J3 304 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 CREB3O43889 395 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 CDK17Q00537 523 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 C2orf54Q08AI8 447 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 ITPK1Q13572 414 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 TSGA10IPQ3SY00 556 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 KSR1Q8IVT5 923 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 IP6K2Q9UHH9 426 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 TOM1L1O75674 476 aa17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 ATP1A3P13637 1013 aa17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 STILQ15468 1287 aa17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 ACCSLQ4AC99 568 aa17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 C16orf86Q6ZW13 317 aa17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 POLD4Q9HCU8 107 aa17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 CUL1Q13616 776 aa17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 TRIM49BA6NDI0 452 aa17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 TADA2AO75478 443 aa17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 FRA10AC1Q70Z53 315 aa17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 SRBD1Q8N5C6 995 aaKnown RBP17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 N4BP2L2Q92802 583 aaPredicted RBP17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 ALKBH8Q96BT7 664 aaKnown RBP17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 SERPINB6P35237 376 aa17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 FBXO33Q7Z6M2 555 aa17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 SPATA2LQ8IUW3 424 aaPredicted RBP17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 OLA1Q9NTK5 396 aaKnown RBP17.31■□□□□ 0.36
PCDHA3-201ENST00000522353 H3BRJ5 948 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 SLC26A4O43511 780 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 MOCS2O96007 188 aaPredicted RBP17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 RBP5P82980 135 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 TAP1Q03518 808 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 ALS2CLQ60I27 953 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 PDXKO00764 312 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 RFC5P40937 340 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 DRAP1Q14919 205 aaPredicted RBP17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 TJP2Q9UDY2 1190 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 LSM7Q9UK45 103 aaKnown RBP17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 CLTAP09496 248 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 MMP14P50281 582 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 FAM102AQ5T9C2 384 aaPredicted RBP17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 GLB1LQ6UWU2 654 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 EFHBQ8N7U6 833 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 CDC26Q8NHZ8 85 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 KCND2Q9NZV8 630 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 TMEM247A6NEH6 219 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 MGEA5O60502 916 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 KRT38O76015 456 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 CTSHP09668 335 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 FCGRTP55899 365 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 RCN2Q14257 317 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 HEATR6Q6AI08 1181 aaKnown RBP17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 SH3TC2Q8TF17 1288 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 GLT1D1Q96MS3 346 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 TUBB6Q9BUF5 446 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 EFHD1Q9BUP0 239 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 FIS1Q9Y3D6 152 aa17.3■□□□□ 0.36
PCDHA3-201ENST00000522353 RPS6KA5O75582 802 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 ALDH1A1P00352 501 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 ZFXP17010 805 aaPredicted RBP17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 SARM1Q6SZW1 724 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 SLC38A7Q9NVC3 462 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 CROCC2H7BZ55 1655 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 CCT5P48643 541 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 BCAR1P56945 870 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 EZH2Q15910 746 aaKnown RBP17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 ATG16L1Q676U5 607 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 AP1M1Q9BXS5 423 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 EDEM3Q9BZQ6 932 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 LRRC53A6NM62 1247 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 GNGT2O14610 69 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 GTF2A2P52657 109 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 ZNF564Q8TBZ8 553 aaPredicted RBP17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 MORC4Q8TE76 937 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 ZMYND10O75800 440 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 FRMD5Q7Z6J6 570 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 RNF180Q86T96 592 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 LAMC1P11047 1609 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 EMSYQ7Z589 1322 aa17.29■□□□□ 0.36
PCDHA3-201ENST00000522353 GSTA4O15217 222 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 SNX2O60749 519 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 ADCY1Q08828 1119 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 WDR72Q3MJ13 1102 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 SAMD7Q7Z3H4 446 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 ZBTB18Q99592 522 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 ZMYND12Q9H0C1 365 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 DDX56Q9NY93 547 aaKnown RBP17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 TBK1Q9UHD2 729 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 PCSK1NQ9UHG2 260 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 PDS5AQ29RF7 1337 aaKnown RBP17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 IFNA8P32881 189 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms