RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 NID2Q14112 1375 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 FRMPD2Q68DX3 1309 aaPredicted RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 TRAV20A0A0B4J274 112 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 A0A1W2PQU0 124 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 ERICH2A1L162 156 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 MEIS3P2A8K0S8 358 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 DCXO43602 365 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 BRINP1O60477 761 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 TCEA3O75764 348 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 DNAJC8O75937 253 aaPredicted RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 ABLIM3O94929 683 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 ZIC2O95409 532 aaPredicted RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 HSP90AA1P07900 732 aaKnown RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 PARP1P09874 1014 aaKnown RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 GOLGA8HP0CJ92 632 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 RARAP10276 462 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 NME2P22392 152 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 PDIA3P30101 505 aaKnown RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 MAN1A1P33908 653 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 SLC16A2P36021 539 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 RNF144AP50876 292 aaPredicted RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 STAT2P52630 851 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 RCAN1P53805 252 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 OAZ1P54368 228 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 EPHB4P54760 987 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 PTPN11Q06124 597 aaPredicted RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 HYAL2Q12891 473 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 LRRC14Q15048 493 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 DHCR24Q15392 516 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 MAPRE1Q15691 268 aaKnown RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 ASPRV1Q53RT3 343 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 SYDE2Q5VT97 1194 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 CXorf57Q6NSI4 855 aaKnown RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 APOA5Q6Q788 366 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 CATIPQ7Z7H3 387 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 RIOX2Q8IUF8 465 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 SULF2Q8IWU5 870 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 ADGRF4Q8IZF3 695 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 SRBD1Q8N5C6 995 aaKnown RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 FANCBQ8NB91 859 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 SHCBP1Q8NEM2 672 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 VPS37AQ8NEZ2 397 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 PRSS33Q8NF86 280 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 PJA1Q8NG27 643 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 STK35Q8TDR2 534 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 SMCR8Q8TEV9 937 aaPredicted RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 USP33Q8TEY7 942 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 TRIB2Q92519 343 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 USP6NLQ92738 828 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 BRF1Q92994 677 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 GAL3ST3Q96A11 431 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 HS3ST6Q96QI5 342 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 INSM2Q96T92 566 aaPredicted RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 MYL10Q9BUA6 226 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 SARGQ9BW04 601 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 MOV10L1Q9BXT6 1211 aaKnown RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 UPF3BQ9BZI7 483 aaKnown RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 SPATC1LQ9H0A9 340 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 PORCNQ9H237 461 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 CPVLQ9H3G5 476 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 ZFAND3Q9H8U3 227 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 JMJD4Q9H9V9 463 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 PDLIM7Q9NR12 457 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 SPEF1Q9Y4P9 236 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 RIPK3Q9Y572 518 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 CYP46A1Q9Y6A2 500 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 USP34Q70CQ2 3546 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 CFAP54Q96N23 3096 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 PLXNB2O15031 1838 aa5.6□□□□□ -1.51
CPNE4-207ENST00000506687 TRIM43BA6NCK2 446 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 KLRF2D3W0D1 207 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 DNM1LO00429 736 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 ZNF500O60304 480 aaPredicted RBP5.59□□□□□ -1.51
CPNE4-207ENST00000506687 KPNA6O60684 536 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 PPP1R11O60927 126 aaPredicted RBP5.59□□□□□ -1.51
CPNE4-207ENST00000506687 ZBED4O75132 1171 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 SLC25A27O95847 323 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 PSAPP07602 524 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 MYL3P08590 195 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 CALM1P0DP23 149 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 CALM2P0DP24 149 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 CALM3P0DP25 149 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 ACRP10323 421 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 MSX1P28360 303 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 PPM1FP49593 454 aaPredicted RBP5.59□□□□□ -1.51
CPNE4-207ENST00000506687 DGKGP49619 791 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 SNAP25P60880 206 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 FPGSQ05932 587 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 PPP2R5BQ15173 497 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 RAB30Q15771 203 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 SEPT7Q16181 437 aaKnown RBP5.59□□□□□ -1.51
CPNE4-207ENST00000506687 NTRK3Q16288 839 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 PTPN21Q16825 1174 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 CCDC96Q2M329 555 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 GNPTABQ3T906 1256 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 SLC39A5Q6ZMH5 540 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 HFE2Q6ZVN8 426 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 TMTC3Q6ZXV5 915 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 SCUBE1Q8IWY4 988 aa5.59□□□□□ -1.51
CPNE4-207ENST00000506687 ANKRD42Q8N9B4 389 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms