RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 CUEDC2Q9H467 287 aa6.71□□□□□ -1.34
CPSF7-213ENST00000494016 PSTPIP2Q9H939 334 aa6.71□□□□□ -1.34
CPSF7-213ENST00000494016 ZNF277Q9NRM2 450 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-213ENST00000494016 BLOC1S4Q9NUP1 217 aa6.71□□□□□ -1.34
CPSF7-213ENST00000494016 RMND1Q9NWS8 449 aa6.71□□□□□ -1.34
CPSF7-213ENST00000494016 TRMT1Q9NXH9 659 aaKnown RBP6.71□□□□□ -1.34
CPSF7-213ENST00000494016 CTNND2Q9UQB3 1225 aa6.71□□□□□ -1.34
CPSF7-213ENST00000494016 GDAQ9Y2T3 454 aa6.71□□□□□ -1.34
CPSF7-213ENST00000494016 SCO2A0A1W2PP80 73 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 CLRN2A0PK11 232 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 MYMKA6NI61 221 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 TCP10L2B9ZVM9 353 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 H7C1D1 291 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 DYNC1I1O14576 645 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 ENC1O14682 589 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 MEIS2O14770 477 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 ECEL1O95672 775 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 SFPQP23246 707 aaKnown RBP eCLIP6.7□□□□□ -1.34
CPSF7-213ENST00000494016 SLC1A4P43007 532 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 USP11P51784 963 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 PMS1P54277 932 aaKnown RBP6.7□□□□□ -1.34
CPSF7-213ENST00000494016 SNAP25P60880 206 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 SETQ01105 290 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-213ENST00000494016 ICA1Q05084 483 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 KRT31Q15323 416 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 DLGAP5Q15398 846 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 CDC37Q16543 378 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-213ENST00000494016 CALCRLQ16602 461 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 HP1BP3Q5SSJ5 553 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-213ENST00000494016 ANKRD34AQ69YU3 496 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 USP17L6PQ6QN14 398 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 REXO1L1PQ8IX06 675 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 SMG8Q8ND04 991 aaKnown RBP6.7□□□□□ -1.34
CPSF7-213ENST00000494016 ACER1Q8TDN7 264 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 CORO1BQ9BR76 489 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 TRIM9Q9C026 710 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 SUGCTQ9HAC7 445 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 MAGEF1Q9HAY2 307 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 LRWD1Q9UFC0 647 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 MAPK8IP1Q9UQF2 711 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 PCDHA1Q9Y5I3 950 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 LTBP3Q9NS15 1303 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 SYNRGQ9UMZ2 1314 aa6.7□□□□□ -1.34
CPSF7-213ENST00000494016 SMCHD1A6NHR9 2005 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 TPD52L2O43399 206 aaKnown RBP6.69□□□□□ -1.34
CPSF7-213ENST00000494016 SORBS3O60504 671 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 FBXO24O75426 580 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 CTSHP09668 335 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 BMP3P12645 472 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 NME2P22392 152 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 ECE1P42892 770 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 TNNI2P48788 182 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 COPB1P53618 953 aaKnown RBP6.69□□□□□ -1.34
CPSF7-213ENST00000494016 ADKP55263 362 aaKnown RBP6.69□□□□□ -1.34
CPSF7-213ENST00000494016 CXCL9Q07325 125 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 RBL2Q08999 1139 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 STK4Q13043 487 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 PAK1Q13153 545 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 RSPO4Q2I0M5 234 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-213ENST00000494016 TMEM119Q4V9L6 283 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 COBLL1Q53SF7 1204 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 TCP11X2Q5H9J9 407 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 HYIQ5T013 277 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 SYDE2Q5VT97 1194 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 FKBP1CQ5VVH2 108 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 SPECC1LQ69YQ0 1117 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 TTI2Q6NXR4 508 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 CNNM4Q6P4Q7 775 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 TRIM65Q6PJ69 517 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 SV2BQ7L1I2 683 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 KCNK18Q7Z418 384 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 PDZD3Q86UT5 571 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 TEX2Q8IWB9 1127 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 SULF2Q8IWU5 870 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 CCDC112Q8NEF3 446 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 AGBL3Q8NEM8 1001 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 ZNF507Q8TCN5 953 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 STK35Q8TDR2 534 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 GJA10Q969M2 543 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 TP53INP1Q96A56 240 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 DHTKD1Q96HY7 919 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-213ENST00000494016 FAM46AQ96IP4 442 aaKnown RBP6.69□□□□□ -1.34
CPSF7-213ENST00000494016 PPP1R13BQ96KQ4 1090 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 C16orf45Q96MC5 204 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-213ENST00000494016 GLT8D2Q9H1C3 349 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 VPS16Q9H269 839 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 TAOK3Q9H2K8 898 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.69□□□□□ -1.34
CPSF7-213ENST00000494016 KCNMB3Q9NPA1 279 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 PRDM10Q9NQV6 1147 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 DDX25Q9UHL0 483 aaKnown RBP6.69□□□□□ -1.34
CPSF7-213ENST00000494016 HERC5Q9UII4 1024 aaKnown RBP6.69□□□□□ -1.34
CPSF7-213ENST00000494016 HDAC9Q9UKV0 1011 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 ZNRF3Q9ULT6 936 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 SYNPO2Q9UMS6 1093 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 TMX2Q9Y320 296 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 PAXBP1Q9Y5B6 917 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 ZNF541Q9H0D2 1346 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 SCN4AP35499 1836 aa6.69□□□□□ -1.34
CPSF7-213ENST00000494016 PVALEFA0A1B0GWK0 134 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms