RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	DDX11	Q96FC9	970 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	LTV1	Q96GA3	475 aa	Predicted RBP	4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	TCEANC2	Q96MN5	208 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	MAP3K14	Q99558	947 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	SPATA25	Q9BR10	227 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	XPO4	Q9C0E2	1151 aa	Known RBP	4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	PAG1	Q9NWQ8	432 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	PCDHA5	Q9Y5H7	936 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	DUSP10	Q9Y6W6	482 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438		V9GYY5	206 aa	Predicted RBP	4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	MAST3	O60307	1309 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	WDR17	Q8IZU2	1322 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	STK36	Q9NRP7	1315 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	CACNA1B	Q00975	2339 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	CEP290	O15078	2479 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438		A0A1B0GUL6	1792 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	LAMB2	P55268	1798 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	BCL9	O00512	1426 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	MYH1	P12882	1939 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	MKI67	P46013	3256 aa	Known RBP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438		A0A1B0GVL5	298 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438		H0YGN5	161 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	ARHGAP6	O43182	974 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZSCAN12	O43309	604 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	CUTA	O60888	179 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	TADA3	O75528	432 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	MPO	P05164	745 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	TUBB	P07437	444 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF18	P17022	549 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	SFPQ	P23246	707 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	ERCC5	P28715	1186 aa	Predicted RBP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	EIF4A3	P38919	411 aa	Known RBP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	CRK	P46108	304 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	ME1	P48163	572 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	RCAN1	P53805	252 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	NCKAP1L	P55160	1127 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	KIF23	Q02241	960 aa	Predicted RBP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	TMEM62	Q0P6H9	643 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	STK3	Q13188	491 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	NTRK3	Q16288	839 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	DPCR1	Q3MIW9	517 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	JAKMIP3	Q5VZ66	844 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	TMED8	Q6PL24	325 aa	Predicted RBP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	CRIP3	Q6Q6R5	217 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	SPRED1	Q7Z699	444 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	CTU1	Q7Z7A3	348 aa	Known RBP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	VSTM4	Q8IW00	320 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	AOPEP	Q8N6M6	819 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	TRIML1	Q8N9V2	468 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	DAGLB	Q8NCG7	672 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	KLHDC4	Q8TBB5	520 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	RABGGTA	Q92696	567 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	EDC3	Q96F86	508 aa	Known RBP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF496	Q96IT1	587 aa	Predicted RBP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	C8orf76	Q96K31	380 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	SAMD11	Q96NU1	681 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	SEC62	Q99442	399 aa	Known RBP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	MYD88	Q99836	296 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	SDF4	Q9BRK5	362 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	ISCA1	Q9BUE6	129 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	G6PC3	Q9BUM1	346 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	IFNK	Q9P0W0	207 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	GMIP	Q9P107	970 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	CALCOCO1	Q9P1Z2	691 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	ORC3	Q9UBD5	711 aa	Predicted RBP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	DNAI1	Q9UI46	699 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	PCDHB14	Q9Y5E9	798 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	CLIC4	Q9Y696	253 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	ATAD5	Q96QE3	1844 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	WNK3	Q9BYP7	1800 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	ARFGEF1	Q9Y6D6	1849 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	SBF1	O95248	1867 aa		4.11	□□□□□ -1.75
CSMD2-208	ENST00000471438	TOGARAM1	Q9Y4F4	1720 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438		A0A087WZG4	1122 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	SHISA3	A0PJX4	238 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	ERVV-2	B6SEH9	535 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438		M0R2C6	588 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	MAP2K7	O14733	419 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	RPS6KA5	O75582	802 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	CLEC3A	O75596	197 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	WDHD1	O75717	1129 aa	Predicted RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	KRT37	O76014	449 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	CDKL5	O76039	1030 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	ATE1	O95260	518 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	FGA	P02671	866 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	PNMA6A	P0CW24	399 aa	Predicted RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	HSP90B1	P14625	803 aa	Known RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	PFKFB1	P16118	471 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	ENDOU	P21128	410 aa	Known RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	PBX1	P40424	430 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	LIFR	P42702	1097 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	KIR2DL1	P43626	348 aa	Predicted RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	KIR2DL2	P43627	348 aa	Predicted RBP	4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	LIMS1	P48059	325 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	ANTXR2	P58335	489 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	ERVFRD-1	P60508	538 aa		4.1	□□□□□ -1.75
CSMD2-208	ENST00000471438	MYL5	Q02045	173 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms