RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-208ENST00000471438 AEBP2Q6ZN18 517 aaPredicted RBP20.13■□□□□ 0.81
CSMD2-208ENST00000471438 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
CSMD2-208ENST00000471438 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
CSMD2-208ENST00000471438 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
CSMD2-208ENST00000471438 FOXD1Q16676 465 aa16.16■□□□□ 0.18
CSMD2-208ENST00000471438 POTEDQ86YR6 584 aa15.87■□□□□ 0.13
CSMD2-208ENST00000471438 MSH5O43196 834 aa15.36■□□□□ 0.05
CSMD2-208ENST00000471438 PIAS4Q8N2W9 510 aaPredicted RBP15.01□□□□□ -0.01
CSMD2-208ENST00000471438 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
CSMD2-208ENST00000471438 PLPPR3Q6T4P5 718 aa14.67□□□□□ -0.06
CSMD2-208ENST00000471438 ADRA2BP18089 450 aa14.64□□□□□ -0.07
CSMD2-208ENST00000471438 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
CSMD2-208ENST00000471438 MAPK8IP2Q13387 824 aaPredicted RBP13.6□□□□□ -0.23
CSMD2-208ENST00000471438 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.25
CSMD2-208ENST00000471438 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
CSMD2-208ENST00000471438 DCAF8L1A6NGE4 600 aa13.16□□□□□ -0.3
CSMD2-208ENST00000471438 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
CSMD2-208ENST00000471438 HOXD11P31277 338 aaPredicted RBP12.9□□□□□ -0.34
CSMD2-208ENST00000471438 C1QBPQ07021 282 aaKnown RBP12.83□□□□□ -0.36
CSMD2-208ENST00000471438 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
CSMD2-208ENST00000471438 RNF216Q9NWF9 866 aaPredicted RBP12.68□□□□□ -0.38
CSMD2-208ENST00000471438 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
CSMD2-208ENST00000471438 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
CSMD2-208ENST00000471438 POTEHQ6S545 545 aa12.35□□□□□ -0.43
CSMD2-208ENST00000471438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.35□□□□□ -0.43
CSMD2-208ENST00000471438 NCBP3Q53F19 620 aaKnown RBP12.16□□□□□ -0.46
CSMD2-208ENST00000471438 DSG3P32926 999 aa12.03□□□□□ -0.48
CSMD2-208ENST00000471438 CAPN15O75808 1086 aa12.02□□□□□ -0.49
CSMD2-208ENST00000471438 U3KPZ7 1027 aaPredicted RBP11.98□□□□□ -0.49
CSMD2-208ENST00000471438 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
CSMD2-208ENST00000471438 NPM3O75607 178 aaKnown RBP11.94□□□□□ -0.5
CSMD2-208ENST00000471438 TRHP20396 242 aaPredicted RBP11.7□□□□□ -0.54
CSMD2-208ENST00000471438 ABCB7O75027 752 aa11.68□□□□□ -0.54
CSMD2-208ENST00000471438 APLP2Q06481 763 aa11.66□□□□□ -0.54
CSMD2-208ENST00000471438 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
CSMD2-208ENST00000471438 SLC4A2P04920 1241 aa11.53□□□□□ -0.56
CSMD2-208ENST00000471438 RBM42Q9BTD8 480 aaKnown RBP11.53□□□□□ -0.56
CSMD2-208ENST00000471438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.5□□□□□ -0.57
CSMD2-208ENST00000471438 HNRNPUL2Q1KMD3 747 aaKnown RBP11.5□□□□□ -0.57
CSMD2-208ENST00000471438 CHRDL2Q6WN34 429 aa11.46□□□□□ -0.57
CSMD2-208ENST00000471438 SAMD1Q6SPF0 538 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-208ENST00000471438 SP7Q8TDD2 431 aaPredicted RBP11.33□□□□□ -0.6
CSMD2-208ENST00000471438 POLA2Q14181 598 aa11.25□□□□□ -0.61
CSMD2-208ENST00000471438 KCNA4P22459 653 aa11.24□□□□□ -0.61
CSMD2-208ENST00000471438 AKT1S1Q96B36 256 aa11.14□□□□□ -0.63
CSMD2-208ENST00000471438 MYCNP04198 464 aaPredicted RBP11.08□□□□□ -0.64
CSMD2-208ENST00000471438 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
CSMD2-208ENST00000471438 HAX1O00165 279 aa11.05□□□□□ -0.64
CSMD2-208ENST00000471438 REM2Q8IYK8 340 aaPredicted RBP11.02□□□□□ -0.65
CSMD2-208ENST00000471438 ZBTB12Q9Y330 459 aaPredicted RBP10.99□□□□□ -0.65
CSMD2-208ENST00000471438 FXR2P51116 673 aaKnown RBP eCLIP10.92□□□□□ -0.66
CSMD2-208ENST00000471438 PITPNM1O00562 1244 aa10.91□□□□□ -0.66
CSMD2-208ENST00000471438 OSCARQ8IYS5 282 aa10.9□□□□□ -0.66
CSMD2-208ENST00000471438 ATF5Q9Y2D1 282 aaPredicted RBP10.84□□□□□ -0.67
CSMD2-208ENST00000471438 EVX2Q03828 476 aa10.82□□□□□ -0.68
CSMD2-208ENST00000471438 FOXD4L1Q9NU39 408 aa10.68□□□□□ -0.7
CSMD2-208ENST00000471438 PRKAR2AP13861 404 aaKnown RBP10.65□□□□□ -0.7
CSMD2-208ENST00000471438 LHX8Q68G74 356 aa10.63□□□□□ -0.71
CSMD2-208ENST00000471438 SPDYE2BA6NHP3 402 aa10.59□□□□□ -0.71
CSMD2-208ENST00000471438 C19orf67A6NJJ6 358 aa10.59□□□□□ -0.71
CSMD2-208ENST00000471438 SPDYE6P0CI01 402 aa10.59□□□□□ -0.71
CSMD2-208ENST00000471438 SPDYE2Q495Y8 402 aa10.59□□□□□ -0.71
CSMD2-208ENST00000471438 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
CSMD2-208ENST00000471438 GABBR2O75899 941 aa10.57□□□□□ -0.72
CSMD2-208ENST00000471438 SPDYE1Q8NFV5 336 aaPredicted RBP10.55□□□□□ -0.72
CSMD2-208ENST00000471438 SLC4A1APQ9BWU0 796 aaKnown RBP10.54□□□□□ -0.72
CSMD2-208ENST00000471438 FBLN2P98095 1184 aa10.51□□□□□ -0.73
CSMD2-208ENST00000471438 PLSCR2Q9NRY7 297 aa10.42□□□□□ -0.74
CSMD2-208ENST00000471438 CHADLQ6NUI6 762 aa10.41□□□□□ -0.74
CSMD2-208ENST00000471438 ZNF692Q9BU19 519 aaPredicted RBP10.4□□□□□ -0.74
CSMD2-208ENST00000471438 ATXN8OSP0DMR3 200 aa10.39□□□□□ -0.75
CSMD2-208ENST00000471438 SSUH2Q9Y2M2 353 aa10.36□□□□□ -0.75
CSMD2-208ENST00000471438 PRR29P0C7W0 189 aa10.32□□□□□ -0.76
CSMD2-208ENST00000471438 POTEIP0CG38 1075 aa10.32□□□□□ -0.76
CSMD2-208ENST00000471438 ZBTB22O15209 634 aa10.3□□□□□ -0.76
CSMD2-208ENST00000471438 MKRN4PQ13434 485 aaPredicted RBP10.3□□□□□ -0.76
CSMD2-208ENST00000471438 CD44P16070 742 aaKnown RBP10.28□□□□□ -0.76
CSMD2-208ENST00000471438 CLCN6P51797 869 aa10.24□□□□□ -0.77
CSMD2-208ENST00000471438 PABPN1Q86U42 306 aaKnown RBP eCLIP10.22□□□□□ -0.77
CSMD2-208ENST00000471438 DCBLD2Q96PD2 775 aa10.21□□□□□ -0.77
CSMD2-208ENST00000471438 FARP1Q9Y4F1 1045 aaPredicted RBP10.19□□□□□ -0.78
CSMD2-208ENST00000471438 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
CSMD2-208ENST00000471438 ZRANB1Q9UGI0 708 aa10.06□□□□□ -0.8
CSMD2-208ENST00000471438 OTUD5Q96G74 571 aa10.05□□□□□ -0.8
CSMD2-208ENST00000471438 POTEMA6NI47 508 aa10.04□□□□□ -0.8
CSMD2-208ENST00000471438 GALR2O43603 387 aaPredicted RBP9.99□□□□□ -0.81
CSMD2-208ENST00000471438 POTEGQ6S5H5 508 aa9.99□□□□□ -0.81
CSMD2-208ENST00000471438 POTEB2H3BUK9 544 aa9.97□□□□□ -0.81
CSMD2-208ENST00000471438 PCDH10Q9P2E7 1040 aa9.91□□□□□ -0.82
CSMD2-208ENST00000471438 CREBZFQ9NS37 354 aa9.9□□□□□ -0.82
CSMD2-208ENST00000471438 PAK3O75914 559 aaPredicted RBP9.89□□□□□ -0.83
CSMD2-208ENST00000471438 PHF12Q96QT6 1004 aa9.85□□□□□ -0.83
CSMD2-208ENST00000471438 STAG3Q9UJ98 1225 aa9.85□□□□□ -0.83
CSMD2-208ENST00000471438 PELP1Q8IZL8 1130 aaKnown RBP9.83□□□□□ -0.84
CSMD2-208ENST00000471438 METRNQ9UJH8 293 aa9.79□□□□□ -0.84
CSMD2-208ENST00000471438 MAMSTRQ6ZN01 415 aa9.77□□□□□ -0.85
CSMD2-208ENST00000471438 NPM1P06748 294 aaKnown RBP eCLIP9.75□□□□□ -0.85
CSMD2-208ENST00000471438 C7P10643 843 aa9.75□□□□□ -0.85
CSMD2-208ENST00000471438 SLC39A7Q92504 469 aa9.75□□□□□ -0.85
CSMD2-208ENST00000471438 ASTLQ6HA08 431 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms