RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 DAPK3O43293 454 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 SNX3O60493 162 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 CCNT1O60563 726 aaKnown RBP3.4□□□□□ -1.86
CUL3-204ENST00000409777 CAND2O75155 1236 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 PEX14O75381 377 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 EYA4O95677 639 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 HSPA6P17066 643 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 JUNDP17535 347 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 CYP11B2P19099 503 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 TMOD1P28289 359 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 TM4SF1P30408 202 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 NF2P35240 595 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 TECP42680 631 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 POLR2FP61218 127 aaKnown RBP3.4□□□□□ -1.86
CUL3-204ENST00000409777 MAGOHP61326 146 aaKnown RBP3.4□□□□□ -1.86
CUL3-204ENST00000409777 TFAP4Q01664 338 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 GABPAQ06546 454 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 CBLBQ13191 982 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 BLMHQ13867 455 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 CNGA2Q16280 664 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 ACCSLQ4AC99 568 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 FAM26FQ5R3K3 315 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 RNF43Q68DV7 783 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 CC2D2BQ6DHV5 1058 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 CGB2Q6NT52 195 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 CACNA2D4Q7Z3S7 1137 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 HOOK3Q86VS8 718 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 ANKRD13CQ8N6S4 541 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 ENDOVQ8N8Q3 282 aaKnown RBP3.4□□□□□ -1.86
CUL3-204ENST00000409777 OR2W6PQ8NHA6 318 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 CCDC26Q8TAB7 109 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 LMBR1Q8WVP7 490 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 IFT81Q8WYA0 676 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 MAGOHBQ96A72 148 aaKnown RBP3.4□□□□□ -1.86
CUL3-204ENST00000409777 CCDC114Q96M63 670 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 TMEM237Q96Q45 408 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 SETDB2Q96T68 719 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 NAP1L4Q99733 375 aaKnown RBP3.4□□□□□ -1.86
CUL3-204ENST00000409777 STRA6Q9BX79 667 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 RTFDC1Q9BY42 306 aaPredicted RBP3.4□□□□□ -1.86
CUL3-204ENST00000409777 PRDM11Q9NQV5 511 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 DMAC2Q9NW81 257 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 SLC27A5Q9Y2P5 690 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 TMA7Q9Y2S6 64 aaKnown RBP3.4□□□□□ -1.86
CUL3-204ENST00000409777 LRRC42Q9Y546 428 aa3.4□□□□□ -1.86
CUL3-204ENST00000409777 DNMT3AQ9Y6K1 912 aaPredicted RBP3.4□□□□□ -1.86
CUL3-204ENST00000409777 SMCO2A6NFE2 343 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 GOLGA6L10A6NI86 522 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 PHF20L1A8MW92 1017 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 KLRF2D3W0D1 207 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 KCNK3O14649 394 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 SCAMP3O14828 347 aaKnown RBP3.4□□□□□ -1.87
CUL3-204ENST00000409777 TTI1O43156 1089 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 ICMTO60725 284 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 PPP1R11O60927 126 aaPredicted RBP3.4□□□□□ -1.87
CUL3-204ENST00000409777 SHBGP04278 402 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 NQO1P15559 274 aaKnown RBP3.4□□□□□ -1.87
CUL3-204ENST00000409777 CCND1P24385 295 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 KLRK1P26718 216 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 MATR3P43243 847 aaKnown RBP eCLIP3.4□□□□□ -1.873e-7■■■■□ 25.8
CUL3-204ENST00000409777 CRKLP46109 303 aaKnown RBP3.4□□□□□ -1.87
CUL3-204ENST00000409777 PEX5P50542 639 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 ADCY2Q08462 1091 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 KLHL30Q0D2K2 578 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 MAPK7Q13164 816 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 CALCRLQ16602 461 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 PTPRNQ16849 979 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 PARP6Q2NL67 630 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 C6orf118Q5T5N4 469 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 BZW1Q7L1Q6 419 aaKnown RBP3.4□□□□□ -1.87
CUL3-204ENST00000409777 TRPM8Q7Z2W7 1104 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 DDX42Q86XP3 938 aaKnown RBP eCLIP3.4□□□□□ -1.87
CUL3-204ENST00000409777 ANKMY2Q8IV38 441 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 FMNL3Q8IVF7 1028 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 ZDHHC14Q8IZN3 488 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 REXO1Q8N1G1 1221 aaKnown RBP3.4□□□□□ -1.87
CUL3-204ENST00000409777 GBP7Q8N8V2 638 aaPredicted RBP3.4□□□□□ -1.87
CUL3-204ENST00000409777 GPATCH11Q8N954 259 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 GIMAP7Q8NHV1 300 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 MORC4Q8TE76 937 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 RFFLQ8WZ73 363 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 SLC35C1Q96A29 364 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 IFT43Q96FT9 208 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 LRCH3Q96II8 777 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 RUNDC3BQ96NL0 473 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 HINFPQ9BQA5 517 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 ANKRD2Q9GZV1 360 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 MTFR1LQ9H019 292 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 NT5C3AQ9H0P0 336 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 DDX47Q9H0S4 455 aaKnown RBP3.4□□□□□ -1.87
CUL3-204ENST00000409777 RAB17Q9H0T7 212 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 RABEP2Q9H5N1 569 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 PANK4Q9NVE7 773 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 BAZ2BQ9UIF8 2168 aaKnown RBP3.4□□□□□ -1.87
CUL3-204ENST00000409777 NEU2Q9Y3R4 380 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 NR2E1Q9Y466 385 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 NFASCO94856 1347 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 ADGRA3Q8IWK6 1321 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 CNTNAP4Q9C0A0 1308 aa3.4□□□□□ -1.87
CUL3-204ENST00000409777 UBR3Q6ZT12 1888 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms