RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 RTN4RL1Q86UN2 441 aaPredicted RBP2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 LRRTM4Q86VH4 590 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 SNX32Q86XE0 403 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 NME9Q86XW9 330 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 C2CD5Q86YS7 1000 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 NLGN4XQ8N0W4 816 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 ZNF655Q8N720 491 aaPredicted RBP2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 LSMEM1Q8N8F7 131 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 NAT16Q8N8M0 369 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 SMG8Q8ND04 991 aaKnown RBP2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 PLBD2Q8NHP8 589 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 DCAF11Q8TEB1 546 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 ATRIPQ8WXE1 791 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 CENPIQ92674 756 aaPredicted RBP2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 DPF2Q92785 391 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 DLG3Q92796 817 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 NELL1Q92832 810 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 SLC35A4Q96G79 324 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 TCTN2Q96GX1 697 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 RSRC1Q96IZ7 334 aaKnown RBP2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 ZC3H10Q96K80 434 aaKnown RBP2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 PKNOX2Q96KN3 472 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 TIGD1Q96MW7 591 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 ZMAT2Q96NC0 199 aaKnown RBP2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 PTCHD1Q96NR3 888 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 TUBGCP5Q96RT8 1024 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 NELL2Q99435 816 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 HEPHQ9BQS7 1158 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 PYM1Q9BRP8 204 aaKnown RBP2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 ADI1Q9BV57 179 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 CDADC1Q9BWV3 514 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 STK31Q9BXU1 1019 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 HDAC8Q9BY41 377 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 STK33Q9BYT3 514 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 CD244Q9BZW8 370 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 SENP6Q9GZR1 1112 aaPredicted RBP2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 LMAN2LQ9H0V9 348 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 KCTD10Q9H3F6 313 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 CNTD2Q9H8S5 307 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 JMJD4Q9H9V9 463 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 CNNM1Q9NRU3 951 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 NKIRAS2Q9NYR9 191 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 CPA4Q9UI42 421 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 DSEQ9UL01 958 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 GPR34Q9UPC5 381 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 COA3Q9Y2R0 106 aaPredicted RBP2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 STARD13Q9Y3M8 1113 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 B3GALT1Q9Y5Z6 326 aa2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 CFAP20Q9Y6A4 193 aaKnown RBP2.43□□□□□ -2.02
HMGN2P39-201ENST00000398005 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 A0A1W2PPC4 97 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 A0A1W2PPH5 198 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 UBA6A0AVT1 1052 aaPredicted RBP2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 SHISA3A0PJX4 238 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 C7orf72A4D263 438 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 PABPN1LA6NDY0 278 aaKnown RBP2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 PRAMEF25A6NGN4 478 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 LRRC14BA6NHZ5 514 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 ISM1B1AKI9 464 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 F8W8V4 182 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 H7BY64 318 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 RBAK-RBAKDNI3L0D1 243 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 IPO5O00410 1097 aaKnown RBP2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 SYT5O00445 386 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 ELL2O00472 640 aaPredicted RBP2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 NPC1O15118 1278 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 SLC16A6O15403 523 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 FOXP2O15409 715 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 FGF10O15520 208 aaPredicted RBP2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 PLOD3O60568 738 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 FKTNO75072 461 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 DGKIO75912 1065 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 PRPF6O94906 941 aaKnown RBP2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 ZNF205O95201 554 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 WISP1O95388 367 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 ZNF865P0CJ78 1059 aaPredicted RBP2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 MYCLP12524 364 aaPredicted RBP2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 MYL4P12829 197 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 XPAP23025 273 aaPredicted RBP2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 FPR2P25090 351 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 AFMP43652 599 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 NPTX2P47972 431 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 FNTBP49356 437 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 SUMO3P55854 103 aaPredicted RBP2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 PCBP3P57721 371 aaKnown RBP2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 FMO1Q01740 532 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 CREMQ03060 361 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 FOXO1Q12778 655 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 MAPK7Q13164 816 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 TRPC3Q13507 836 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 MOGSQ13724 837 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 SPARCL1Q14515 664 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 SEPT2Q15019 361 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 PLCL1Q15111 1095 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 NR0B2Q15466 257 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 FAM110CQ1W6H9 321 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 RSPO4Q2I0M5 234 aaPredicted RBP2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 NKAPLQ5M9Q1 402 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 FBXO47Q5MNV8 452 aa2.42□□□□□ -2.02
HMGN2P39-201ENST00000398005 TTC38Q5R3I4 469 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms