RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 KPNA6O60684 536 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 INHAP05111 366 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 PBX1P40424 430 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 PPP2R3AQ06190 1150 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 TRIM32Q13049 653 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 MXD4Q14582 209 aaPredicted RBP15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 VWA3BQ502W6 1294 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 CEP135Q66GS9 1140 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 NECAB2Q7Z6G3 386 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 FRMD5Q7Z6J6 570 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 SLC9A9Q8IVB4 645 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 C12orf56Q8IXR9 622 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 RETREG2Q8NC44 543 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 ASAP3Q8TDY4 903 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 PSPC1Q8WXF1 523 aaKnown RBP15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 MKNK1Q9BUB5 465 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 KIFC3Q9BVG8 833 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 RNPEPQ9H4A4 650 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 ARHGAP28Q9P2N2 729 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 PHLPP2Q6ZVD8 1323 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 ADGRA3Q8IWK6 1321 aa15.16■□□□□ 0.02
PDLIM5-203ENST00000359265 C22orf31O95567 290 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 TPM1P09493 284 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 C6orf222P0C671 652 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 INSRRP14616 1297 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 CCND3P30281 292 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 GJA9P57773 515 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 STRN3Q13033 797 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 PPFIA1Q13136 1202 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 TRIM14Q14142 442 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 TFDP1Q14186 410 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 FSCN1Q16658 493 aaKnown RBP15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 MIIPQ5JXC2 388 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 ARMCX5Q6P1M9 558 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 TRIM59Q8IWR1 403 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 TRAPPC12Q8WVT3 735 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 LENG1Q96BZ8 264 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 KATNAL1Q9BW62 490 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 UPF3AQ9H1J1 476 aaKnown RBP15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 SUGCTQ9HAC7 445 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 HMX1Q9NP08 348 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 PAK6Q9NQU5 681 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 ARMCX3Q9UH62 379 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 FRMD4BQ9Y2L6 1034 aa15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.15■□□□□ 0.02
PDLIM5-203ENST00000359265 TMEM265A0A087WTH1 108 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 RRN3P2A6NIE6 340 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 ASAP2O43150 1006 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 NRDCO43847 1150 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 F2P00734 622 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 SFPQP23246 707 aaKnown RBP eCLIP15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 PSMC2P35998 433 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 CYP2J2P51589 502 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 IGBP1P78318 339 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 NKX3-2P78367 333 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 TBX2Q13207 712 aaPredicted RBP15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 CAPSQ13938 189 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 PPFIBP1Q86W92 1011 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 ZBTB8OSQ8IWT0 167 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 FAM186BQ8IYM0 893 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 TMEM174Q8WUU8 243 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 BICD1Q96G01 975 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 NDST4Q9H3R1 872 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 TMEM134Q9H6X4 195 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 XPNPEP3Q9NQH7 507 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 DMAC2Q9NW81 257 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 DDX20Q9UHI6 824 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 ZKSCAN5Q9Y2L8 839 aa15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.14■□□□□ 0.01
PDLIM5-203ENST00000359265 TRIP12Q14669 1992 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 AKAP3O75969 853 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 MYL3P08590 195 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 EFNA5P52803 228 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 DRP2Q13474 957 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 GRIK4Q16099 956 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 PTPN21Q16825 1174 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 EFCAB12Q6NXP0 572 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 ZSCAN30Q86W11 494 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 LRRC71Q8N4P6 559 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 METTL13Q8N6R0 699 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 ERGIC2Q96RQ1 377 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 C2orf40Q9H1Z8 148 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 IKZF4Q9H2S9 585 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 SUCLA2Q9P2R7 463 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 SCN10AQ9Y5Y9 1956 aa15.13■□□□□ 0.01
PDLIM5-203ENST00000359265 K7ERI5 159 aa15.12■□□□□ 0.01
PDLIM5-203ENST00000359265 HNRNPDLO14979 420 aaKnown RBP15.12■□□□□ 0.01
PDLIM5-203ENST00000359265 MAPK13O15264 365 aa15.12■□□□□ 0.01
PDLIM5-203ENST00000359265 EXOC3O60645 756 aa15.12■□□□□ 0.01
PDLIM5-203ENST00000359265 MSNP26038 577 aaKnown RBP15.12■□□□□ 0.01
PDLIM5-203ENST00000359265 KLRC1P26715 233 aa15.12■□□□□ 0.01
PDLIM5-203ENST00000359265 TMOD1P28289 359 aa15.12■□□□□ 0.01
PDLIM5-203ENST00000359265 CST5P28325 142 aaPredicted RBP15.12■□□□□ 0.01
PDLIM5-203ENST00000359265 CASP4P49662 377 aa15.12■□□□□ 0.01
PDLIM5-203ENST00000359265 PSEN2P49810 448 aa15.12■□□□□ 0.01
PDLIM5-203ENST00000359265 LIG4P49917 911 aa15.12■□□□□ 0.01
PDLIM5-203ENST00000359265 CLCN3P51790 818 aa15.12■□□□□ 0.01
PDLIM5-203ENST00000359265 LAMTOR4Q0VGL1 99 aa15.12■□□□□ 0.01
PDLIM5-203ENST00000359265 MKRN4PQ13434 485 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms