RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 ROPN1Q9HAT0 212 aaPredicted RBP10.14□□□□□ -0.79
TRERF1-201ENST00000340840 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRERF1-201ENST00000340840 PPP1R9AQ9ULJ8 1098 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 TRPC6Q9Y210 931 aa10.14□□□□□ -0.79
TRERF1-201ENST00000340840 USP15Q9Y4E8 981 aaPredicted RBP10.14□□□□□ -0.79
TRERF1-201ENST00000340840 LTBP4Q8N2S1 1624 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 IL9RQ01113 521 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 CCDC38Q502W7 563 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 ANKRD35Q8N283 1001 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 NEUROG2Q9H2A3 272 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 PCIF1Q9H4Z3 704 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 SUGT1Q9Y2Z0 365 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 DDX39AO00148 427 aaKnown RBP10.13□□□□□ -0.79
TRERF1-201ENST00000340840 DNAJC8O75937 253 aaPredicted RBP10.13□□□□□ -0.79
TRERF1-201ENST00000340840 ECM2O94769 699 aaPredicted RBP10.13□□□□□ -0.79
TRERF1-201ENST00000340840 DRD4P21917 467 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 SNAP25P60880 206 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 PSMC6P62333 389 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 STRN3Q13033 797 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 SNX1Q13596 522 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 ABCB5Q2M3G0 1257 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 DYDC2Q96IM9 177 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 ACCSQ96QU6 501 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 POLR3CQ9BUI4 534 aaPredicted RBP10.13□□□□□ -0.79
TRERF1-201ENST00000340840 ARHGEF10LQ9HCE6 1279 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 TUFT1Q9NNX1 390 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 PKD2L1Q9P0L9 805 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 CNOT7Q9UIV1 285 aaKnown RBP10.13□□□□□ -0.79
TRERF1-201ENST00000340840 CEP83Q9Y592 693 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 FLT3P36888 993 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 LLGL1Q15334 1064 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 CCDC6Q16204 474 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 QPCTQ16769 361 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 ZNF746Q6NUN9 644 aaPredicted RBP10.13□□□□□ -0.79
TRERF1-201ENST00000340840 RUSC1Q9BVN2 902 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 KCNMB3Q9NPA1 279 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 OLFML3Q9NRN5 406 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 PI4KBQ9UBF8 816 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 ANAPC5Q9UJX4 755 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 ZBTB21Q9ULJ3 1066 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 TTC7AQ9ULT0 858 aaPredicted RBP10.13□□□□□ -0.79
TRERF1-201ENST00000340840 SUFUQ9UMX1 484 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 PLCH1Q4KWH8 1693 aa10.13□□□□□ -0.79
TRERF1-201ENST00000340840 UBE4BO95155 1302 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 PAEPP09466 180 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 NUDT17P0C025 328 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 ZNF131P52739 623 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 RHBDL3P58872 404 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 BFSP1Q12934 665 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 ALCAMQ13740 583 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 LRRC14Q15048 493 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 RNF207Q6ZRF8 634 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 MIER3Q7Z3K6 550 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 ZNF564Q8TBZ8 553 aaPredicted RBP10.12□□□□□ -0.79
TRERF1-201ENST00000340840 OSBPL7Q9BZF2 842 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 ECT2Q9H8V3 914 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 DDX60Q8IY21 1712 aaKnown RBP10.12□□□□□ -0.79
TRERF1-201ENST00000340840 TCP11X1B4DZS4 312 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 RTN2O75298 545 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 RASSF9O75901 435 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 LUC7L3O95232 432 aaKnown RBP10.12□□□□□ -0.79
TRERF1-201ENST00000340840 RARGP13631 454 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 BRAFP15056 766 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 KRT15P19012 456 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 MAPK4P31152 587 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 RASSF2P50749 326 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 ZC2HC1CQ53FD0 456 aaPredicted RBP10.12□□□□□ -0.79
TRERF1-201ENST00000340840 LIN9Q5TKA1 542 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 RINT1Q6NUQ1 792 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 TMEM179Q6ZVK1 233 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 GDAP1Q8TB36 358 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 RBM46Q8TBY0 533 aaKnown RBP10.12□□□□□ -0.79
TRERF1-201ENST00000340840 C18orf8Q96DM3 657 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 BICD1Q96G01 975 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 NT5C1BQ96P26 610 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 ZSWIM1Q9BR11 485 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 ZNF577Q9BSK1 485 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 TXLNGQ9NUQ3 528 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 CNOT8Q9UFF9 292 aaKnown RBP10.12□□□□□ -0.79
TRERF1-201ENST00000340840 DBR1Q9UK59 544 aaKnown RBP10.12□□□□□ -0.79
TRERF1-201ENST00000340840 STRCP1A6NGW2 1772 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 NCANO14594 1321 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 EMSYQ7Z589 1322 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 COMTP21964 271 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 CTNNA2P26232 953 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 GCLMP48507 274 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 PRELPP51888 382 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 DRG2P55039 364 aaKnown RBP10.12□□□□□ -0.79
TRERF1-201ENST00000340840 CAV1Q03135 178 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 LACTB2Q53H82 288 aaPredicted RBP10.12□□□□□ -0.79
TRERF1-201ENST00000340840 DUPD1Q68J44 220 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 SLFN11Q7Z7L1 901 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 LMNTD2Q8IXW0 634 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 CCDC127Q96BQ5 260 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 TRIM6Q9C030 488 aaPredicted RBP10.12□□□□□ -0.79
TRERF1-201ENST00000340840 SEMA4AQ9H3S1 761 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 ARL2BPQ9Y2Y0 163 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 PAPPAQ13219 1627 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 DOCK2Q92608 1830 aa10.12□□□□□ -0.79
TRERF1-201ENST00000340840 ATP8B3O60423 1300 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms