RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 MSL3Q8N5Y2 521 aaKnown RBP12.99□□□□□ -0.33
PDGFD-201ENST00000302251 SH3GL2Q99962 352 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 GDF3Q9NR23 364 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 GINM1Q9NU53 330 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 TACC3Q9Y6A5 838 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 RSPH10B2B2RC85 870 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 KLRC4O43908 158 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 MT-ND3P03897 115 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 SHBGP04278 402 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 INHBAP08476 426 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 RSPH10BP0C881 870 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 COPS2P61201 443 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 CDK17Q00537 523 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 CDR2Q01850 454 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 ATG4AQ8WYN0 398 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 CFAP57Q96MR6 1250 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 ZNF577Q9BSK1 485 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 INTS2Q9H0H0 1204 aaKnown RBP12.99□□□□□ -0.33
PDGFD-201ENST00000302251 SMYD3Q9H7B4 428 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 NPHS2Q9NP85 383 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 STOML1Q9UBI4 398 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 PPARGC1AQ9UBK2 798 aaKnown RBP12.99□□□□□ -0.33
PDGFD-201ENST00000302251 MAD2L2Q9UI95 211 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 MYO5AQ9Y4I1 1855 aaKnown RBP12.99□□□□□ -0.33
PDGFD-201ENST00000302251 TESPA1A2RU30 521 aaPredicted RBP12.98□□□□□ -0.33
PDGFD-201ENST00000302251 PI4K2BG5E9Z4 385 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 AKR1B1P15121 316 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 CCND1P24385 295 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 KCNMA1Q12791 1236 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 ACCSLQ4AC99 568 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 AADACL2Q6P093 401 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 KCNK18Q7Z418 384 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 SYT2Q8N9I0 419 aaPredicted RBP12.98□□□□□ -0.33
PDGFD-201ENST00000302251 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.98□□□□□ -0.33
PDGFD-201ENST00000302251 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.98□□□□□ -0.337e-7■■■■■ 49
PDGFD-201ENST00000302251 HNRNPDLO14979 420 aaKnown RBP12.98□□□□□ -0.33
PDGFD-201ENST00000302251 KRT19P08727 400 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 FGFR2P21802 821 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 KCNJ2P63252 427 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 DHX34Q14147 1143 aaKnown RBP12.98□□□□□ -0.33
PDGFD-201ENST00000302251 LRRC23Q53EV4 343 aaPredicted RBP12.98□□□□□ -0.33
PDGFD-201ENST00000302251 ZNF34Q8IZ26 560 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 PAF1Q8N7H5 531 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 CALR3Q96L12 384 aaKnown RBP12.98□□□□□ -0.33
PDGFD-201ENST00000302251 FAM161BQ96MY7 647 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 SH3GL3Q99963 347 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 FAM129AQ9BZQ8 928 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 BATF3Q9NR55 127 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 EMSYQ7Z589 1322 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 RASSF10A6NK89 507 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 TRPA1O75762 1119 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 PHBP35232 272 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 PDIA5Q14554 519 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 SCYL2Q6P3W7 929 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 TMC3Q7Z5M5 1100 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 PYROXD1Q8WU10 500 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 EXOC7Q9UPT5 735 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 DCTN3O75935 186 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 CPA2P48052 419 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 ELF3P78545 371 aaPredicted RBP12.98□□□□□ -0.33
PDGFD-201ENST00000302251 SATB1Q01826 763 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 TRAF1Q13077 416 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 PLCB4Q15147 1175 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 NKX1-1Q15270 411 aaPredicted RBP12.98□□□□□ -0.33
PDGFD-201ENST00000302251 ANKMY2Q8IV38 441 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 C11orf70Q9BRQ4 267 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 PPP1R9AQ9ULJ8 1098 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 TRPC6Q9Y210 931 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 SIK3Q9Y2K2 1263 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 SLC4A7Q9Y6M7 1214 aa12.98□□□□□ -0.33
PDGFD-201ENST00000302251 C4AP0C0L4 1744 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 C4BP0C0L5 1744 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 DNM1LO00429 736 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 ZBTB5O15062 677 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 PON1P27169 355 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 MAN1A1P33908 653 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 CTCFP49711 727 aaPredicted RBP12.97□□□□□ -0.33
PDGFD-201ENST00000302251 PEX3P56589 373 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 IRX1P78414 480 aaPredicted RBP12.97□□□□□ -0.33
PDGFD-201ENST00000302251 OVGP1Q12889 678 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 PDE1CQ14123 709 aaPredicted RBP12.97□□□□□ -0.33
PDGFD-201ENST00000302251 QRICH1Q2TAL8 776 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.97□□□□□ -0.33
PDGFD-201ENST00000302251 PREPLQ4J6C6 727 aaPredicted RBP12.97□□□□□ -0.33
PDGFD-201ENST00000302251 TMCO4Q5TGY1 634 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 TBC1D9BQ66K14 1250 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 ZBED8Q8IZ13 594 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
PDGFD-201ENST00000302251 PIP4K2CQ8TBX8 421 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 UBN1Q9NPG3 1134 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 EPHB1P54762 984 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 MAP7Q14244 749 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 FRMD5Q7Z6J6 570 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 TXNRD3Q86VQ6 643 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 BBOF1Q8ND07 529 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 AGAP11Q8TF27 550 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 AGPAT1Q99943 283 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 METTL5Q9NRN9 209 aaKnown RBP12.97□□□□□ -0.33
PDGFD-201ENST00000302251 PCDHB4Q9Y5E5 795 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 KRT1P04264 644 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms