RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 CDC42EP4Q9H3Q1 356 aaKnown RBP13.77□□□□□ -0.21
HERC6-202ENST00000273960 CYP39A1Q9NYL5 469 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 KIAA1024Q9UPX6 916 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 RPS6KL1Q9Y6S9 549 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.76□□□□□ -0.21
HERC6-202ENST00000273960 KLRF2D3W0D1 207 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 POC1B-GALNT4F8VUJ3 575 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 BAG2O95816 211 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 AFPP02771 609 aaKnown RBP13.76□□□□□ -0.21
HERC6-202ENST00000273960 TSPY3P0CV98 308 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 TSPY8P0CW00 308 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 FOXN2P32314 431 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 CCNFP41002 786 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 CASP4P49662 377 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 CALCOCO2Q13137 446 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 SLC5A9Q2M3M2 681 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 CGB2Q6NT52 195 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 VSTM1Q6UX27 236 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 NSMFQ6X4W1 530 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 C4orf33Q8N1A6 199 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 SCG3Q8WXD2 468 aaKnown RBP13.76□□□□□ -0.21
HERC6-202ENST00000273960 THAP2Q9H0W7 228 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 MYH4Q9Y623 1939 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 MYL1P05976 194 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 CHKAP35790 457 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 MAPK7Q13164 816 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 UBE2SQ16763 222 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 SNX30Q5VWJ9 437 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 TRMT1LQ7Z2T5 733 aaKnown RBP13.76□□□□□ -0.21
HERC6-202ENST00000273960 TAB3Q8N5C8 712 aaPredicted RBP13.76□□□□□ -0.21
HERC6-202ENST00000273960 TBC1D16Q8TBP0 767 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 SNRNP27Q8WVK2 155 aaKnown RBP13.76□□□□□ -0.21
HERC6-202ENST00000273960 ATG4AQ8WYN0 398 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.76□□□□□ -0.21
HERC6-202ENST00000273960 ABTB1Q969K4 478 aaPredicted RBP13.76□□□□□ -0.21
HERC6-202ENST00000273960 IQCDQ96DY2 449 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 BMP2KQ9NSY1 1161 aaPredicted RBP13.76□□□□□ -0.21
HERC6-202ENST00000273960 GCNT4Q9P109 453 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 FRMPD2Q68DX3 1309 aaPredicted RBP13.76□□□□□ -0.21
HERC6-202ENST00000273960 CAPN9O14815 690 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 THAP12O43422 761 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 DLATP10515 647 aaKnown RBP13.76□□□□□ -0.21
HERC6-202ENST00000273960 GSTT1P30711 240 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 HSPA1LP34931 641 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 GCLCP48506 637 aaPredicted RBP13.76□□□□□ -0.21
HERC6-202ENST00000273960 CASP5P51878 434 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 DOK7Q18PE1 504 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 DSTYKQ6XUX3 929 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 TEX9Q8N6V9 391 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 GBP7Q8N8V2 638 aaPredicted RBP13.76□□□□□ -0.21
HERC6-202ENST00000273960 FAM81AQ8TBF8 368 aa13.76□□□□□ -0.21
HERC6-202ENST00000273960 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.76□□□□□ -0.21
HERC6-202ENST00000273960 PARP4Q9UKK3 1724 aaKnown RBP13.75□□□□□ -0.21
HERC6-202ENST00000273960 SIPA1L3O60292 1781 aaPredicted RBP13.75□□□□□ -0.21
HERC6-202ENST00000273960 GJC1P36383 396 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 PTENP60484 403 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 TMEM266Q2M3C6 531 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 MDH1BQ5I0G3 518 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 GPBP1Q86WP2 473 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 ANKRD2Q9GZV1 360 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 GANQ9H2C0 597 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 C12orf65Q9H3J6 166 aaKnown RBP13.75□□□□□ -0.21
HERC6-202ENST00000273960 TXLNGQ9NUQ3 528 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 CFAP69A5D8W1 941 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 GNAZP19086 355 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 GTF2IP78347 998 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 ASRGL1Q7L266 308 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 COL23A1Q86Y22 540 aaPredicted RBP13.75□□□□□ -0.21
HERC6-202ENST00000273960 ELMO3Q96BJ8 720 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 PIGSQ96S52 555 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 PREBQ9HCU5 417 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 EMILIN3Q9NT22 766 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 GRHL1Q9NZI5 618 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 CHD4Q14839 1912 aa13.75□□□□□ -0.21
HERC6-202ENST00000273960 STAT3P40763 770 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 VPS72Q15906 364 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 TAF1BQ53T94 588 aaPredicted RBP13.74□□□□□ -0.21
HERC6-202ENST00000273960 CFAP157Q5JU67 520 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 GJD4Q96KN9 370 aaPredicted RBP13.74□□□□□ -0.21
HERC6-202ENST00000273960 MKNK1Q9BUB5 465 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 STMN4Q9H169 189 aaPredicted RBP13.74□□□□□ -0.21
HERC6-202ENST00000273960 NPHS2Q9NP85 383 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 UBN1Q9NPG3 1134 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 SERPINA10Q9UK55 444 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 CHKBQ9Y259 395 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 STRCQ7RTU9 1775 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 PNPLA7Q6ZV29 1317 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 CCDC160A6NGH7 325 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 SERPINB2P05120 415 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 SCNN1DP51172 638 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 KPNB1Q14974 876 aaKnown RBP13.74□□□□□ -0.21
HERC6-202ENST00000273960 RAD54LQ92698 747 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 NAP1L3Q99457 506 aaPredicted RBP13.74□□□□□ -0.21
HERC6-202ENST00000273960 SUCLA2Q9P2R7 463 aaPredicted RBP13.74□□□□□ -0.21
HERC6-202ENST00000273960 NUDT17P0C025 328 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 PON1P27169 355 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 MFSD14BQ5SR56 506 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 TRIM59Q8IWR1 403 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 SYCE1Q8N0S2 351 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 AIPL1Q9NZN9 384 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms