RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 CCDC151A5D8V7 595 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 KRT14P02533 472 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 TNFAIP2Q03169 654 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 MAPK6Q16659 721 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 AARS2Q5JTZ9 985 aaKnown RBP15.17■□□□□ 0.02
CUX2-201ENST00000261726 ICA1LQ8NDH6 482 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 MRPL40Q9NQ50 206 aaKnown RBP15.17■□□□□ 0.02
CUX2-201ENST00000261726 PCDHA6Q9UN73 950 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 PCDHA8Q9Y5H6 950 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 CACNB3P54284 484 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 GPS1Q13098 491 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 TOPORSQ9NS56 1045 aaPredicted RBP15.17■□□□□ 0.02
CUX2-201ENST00000261726 TRIM49BA6NDI0 452 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 JAK3P52333 1124 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 HDAC4P56524 1084 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 GPC5P78333 572 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 KRT72Q14CN4 511 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 FAM83BQ5T0W9 1011 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 ANKRD40Q6AI12 368 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 SLC24A3Q9HC58 644 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 DIS3Q9Y2L1 958 aaKnown RBP15.17■□□□□ 0.02
CUX2-201ENST00000261726 CCDC159P0C7I6 412 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 PMS2P54278 862 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 TFDP2Q14188 446 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 LRRC14Q15048 493 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 STX19Q8N4C7 294 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 ACAP3Q96P50 834 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 ECT2Q9H8V3 914 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 PNMA3Q9UL41 463 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 AURKCQ9UQB9 309 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 SFR1Q86XK3 245 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 TMCO5AQ8N6Q1 288 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 EXOC4Q96A65 974 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 ZNF229Q9UJW7 825 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 MFAP3LO75121 409 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 ATP1A3P13637 1013 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 PHKA2P46019 1235 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 MAP3K7CLP57077 242 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 TTC13Q8NBP0 860 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 TGS1Q96RS0 853 aaKnown RBP15.16■□□□□ 0.02
CUX2-201ENST00000261726 DYRK4Q9NR20 520 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 MADDQ8WXG6 1647 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 SPDYE5A6NIY4 337 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 ZNF263O14978 683 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 SPDYE7PQ495Y7 208 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 MDH1BQ5I0G3 518 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 RMDN1Q96DB5 314 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 ROR1Q01973 937 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 PDIA2Q13087 525 aaKnown RBP15.16■□□□□ 0.02
CUX2-201ENST00000261726 NAALADL2Q58DX5 795 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 ZBED8Q8IZ13 594 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 POTEMA6NI47 508 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 GH2P01242 217 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 CALB1P05937 261 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 SDC4P31431 198 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 LTKP29376 864 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 ZNF564Q8TBZ8 553 aaPredicted RBP15.16■□□□□ 0.02
CUX2-201ENST00000261726 OTUB1Q96FW1 271 aaPredicted RBP15.16■□□□□ 0.02
CUX2-201ENST00000261726 COPRSQ9NQ92 184 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 PCDHGB4Q9UN71 923 aa15.16■□□□□ 0.02
CUX2-201ENST00000261726 ERFP50548 548 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 ZNF746Q6NUN9 644 aaPredicted RBP15.15■□□□□ 0.02
CUX2-201ENST00000261726 OSBP2Q969R2 916 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 ADNPQ9H2P0 1102 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 CHGBP05060 677 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 CASP1P29466 404 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 GGCXP38435 758 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 MRPL28Q13084 256 aaKnown RBP15.15■□□□□ 0.02
CUX2-201ENST00000261726 CUL3Q13618 768 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 DALRD3Q5D0E6 543 aaKnown RBP15.15■□□□□ 0.02
CUX2-201ENST00000261726 CIAPIN1Q6FI81 312 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 ANKS3Q6ZW76 656 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 LZTS1Q9Y250 596 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 TMEM2Q9UHN6 1383 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 PIK3R2O00459 728 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 NCK2O43639 380 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 ATP9BO43861 1147 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 LCP1P13796 627 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 ARFIP2P53365 341 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 SYCP2LQ5T4T6 812 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 RINLQ6ZS11 566 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 PLEKHM3Q6ZWE6 761 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 RMDN3Q96TC7 470 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 TRIM54Q9BYV2 358 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 NR3C1P04150 777 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 GNA15P30679 374 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 PRELPP51888 382 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 DDX53Q86TM3 631 aaKnown RBP15.15■□□□□ 0.02
CUX2-201ENST00000261726 GCOM2Q9BZD3 368 aaPredicted RBP15.15■□□□□ 0.02
CUX2-201ENST00000261726 KDM4CQ9H3R0 1056 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 DHX35Q9H5Z1 703 aaKnown RBP15.15■□□□□ 0.02
CUX2-201ENST00000261726 LRRC53A6NM62 1247 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 CCDC188H7C350 402 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 BBOX1O75936 387 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 CPB1P15086 417 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 EMBQ6PCB8 327 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 PHF21AQ96BD5 680 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 SRPK1Q96SB4 655 aaKnown RBP15.15■□□□□ 0.02
CUX2-201ENST00000261726 CEP72Q9P209 647 aa15.15■□□□□ 0.02
CUX2-201ENST00000261726 PRAMEF22A3QJZ6 481 aa15.14■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms