RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Ccdc22Q9JIG7 627 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Rpf2Q9JJ80 306 aaKnown RBP9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Cul3Q9JLV5 768 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Bub1bQ9Z1S0 1052 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Lrrc4bP0C192 709 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Usp10P52479 792 aaKnown RBP9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Vamp7P70280 220 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Ptk6Q64434 451 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Rab3ipQ68EF0 428 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Skiv2lQ6NZR5 1244 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Ush1gQ80T11 461 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Agr3Q8R3W7 165 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 NptxrQ99J85 493 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Fmnl1Q9JL26 1094 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Acot3Q9QYR7 432 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Prkab1Q9R078 270 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Apobec2Q9WV35 224 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Ino80Q6ZPV2 1559 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Slc4a9E9PUP3 929 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 SfnO70456 248 aaKnown RBP9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 CstaP56567 97 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Gjb4Q02738 266 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Skap1Q3UUV5 355 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 FcgrtQ61559 365 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Avpr1aQ62463 423 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Nlrp4eQ66X19 978 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Ppp1r37Q8BKR5 712 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Rpa1Q8VEE4 623 aaKnown RBP9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 GzmnQ920S1 248 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Kcnq5Q9JK45 933 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Klra17Q9JMA4 273 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Atp11cQ9QZW0 1129 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 6030498E09RikB1AX85 169 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Stam2O88811 523 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 RenbpP82343 430 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Arhgef16Q3U5C8 713 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Sco1Q5SUC9 284 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Lca5Q80ST9 704 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Castor1Q9CWQ8 331 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Veph1A1A535 833 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Casp12O08736 419 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Mybl1P51960 751 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Cyp2e1Q05421 493 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Gsdmc4Q3TR54 480 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Rnpc3Q3UZ01 514 aaKnown RBP9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Olfr119Q7TRJ5 321 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Supt20hQ7TT00 530 aaKnown RBP9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Ttc7aQ8BGB2 858 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Abi1Q8CBW3 481 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Actl9Q8CG27 415 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Foxp3Q99JB6 429 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Fads3Q9JJE7 449 aa9.93□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Gemin5Q8BX17 1502 aaKnown RBP9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Zc3h7bF8VPP8 982 aaKnown RBP9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Nmt1O70310 496 aaKnown RBP9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Orc4O88708 433 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 LmnaP48678 665 aaKnown RBP9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Kcnn2P58390 839 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Ankrd34bQ3UUF8 508 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Cyp2c67Q569X9 491 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 PrcpQ7TMR0 491 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 4933409G03RikQ8C5U0 320 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Ddx47Q9CWX9 455 aaKnown RBP9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Myo1hQ9D6A1 958 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Cse1lQ9ERK4 971 aaKnown RBP9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Hic1Q9R1Y5 733 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Fam81bA0A140LI28 432 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Cyp4f17G3UW78 524 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Tdpoz4Q6YCH2 370 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Celf4Q7TSY6 486 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Tigd4Q8BUZ3 513 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Spire2Q8K1S6 718 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Stx19Q8R1Q0 292 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Pspc1Q8R326 523 aaKnown RBP9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Atp6v1b1Q91YH6 513 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Cdk9Q99J95 372 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Cyp4f16Q99N17 524 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Scyl3Q9DBQ7 735 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Gm3248K7N721 186 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Tmprss11aQ3UQ41 389 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Ppp1r1bQ60829 194 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Lilrb4Q64281 335 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Cyfip1Q7TMB8 1253 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Chmp2bQ8BJF9 213 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Unc45bQ8CGY6 931 aaKnown RBP9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Xpo6Q924Z6 1125 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Zbtb18Q9WUK6 522 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Tns3Q5SSZ5 1440 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Kif6E9PX57 802 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Gm3371F7CQW8 167 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Gm379J3QQ19 296 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Psmd14O35593 310 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Mup5P11591 180 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Meis3P97368 378 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Atg9aQ68FE2 551 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Atl2Q6PA06 583 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Dcaf15Q6PFH3 600 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Lig4Q8BTF7 911 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Usp27Q8CEG8 438 aa9.92□□□□□ -0.82
Prpf40a-201ENSMUST00000076313 Amhr2Q8K592 568 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms