RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Frmd8Q3UFK8 466 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Clul1Q3ZRW6 464 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Styk1Q6J9G1 429 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Skiv2lQ6NZR5 1244 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Celf6Q7TN33 460 aaKnown RBP9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Kcnc4Q8R1C0 628 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Eif4a3Q91VC3 411 aaKnown RBP9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Pcdhgc5Q91XW9 944 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Zfp64Q99KE8 643 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Kcnq4Q9JK97 696 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Dnajc7Q9QYI3 494 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Prmt2Q9R144 448 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Mettl1Q9Z120 268 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tanc1Q0VGY8 1856 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Lcmt1A0A0U1RNF2 332 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 DgkkE9Q7N4 1118 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 PtpreP49446 699 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gng11P61953 73 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tfdp1Q08639 410 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Snx27Q3UHD6 539 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 BC051142Q3V0M8 400 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Avpr1aQ62463 423 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Usp6nlQ80XC3 819 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Mapk15Q80Y86 549 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Nmrk1Q91W63 195 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 GneQ91WG8 722 aaKnown RBP9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Cep72Q9D3R3 646 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tmem206Q9D771 350 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gfpt2Q9Z2Z9 682 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gm42688A0A0R3P9D1 673 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Cnbd1B1AWM0 430 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Hoxc6P10629 235 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Pnpla5Q32LZ8 432 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Q3TTJ4 293 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Erich4Q3UNU4 136 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tmem232Q5K6N0 675 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 ItgaeQ60677 1167 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Trim25Q61510 634 aaKnown RBP9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Fscn1Q61553 493 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ccdc142Q8CAI1 738 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Slc15a5Q8CBB2 566 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Klhl11Q8CE33 709 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ces1fQ91WU0 561 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tmco4Q91WU4 631 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Castor1Q9CWQ8 331 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Msgn1Q9JK54 188 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gon4lQ9DB00 2260 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Guca2bO09051 106 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tp53P02340 387 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Chrna1P04756 457 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Trim30aP15533 496 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Pik3caP42337 1068 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Yy1Q00899 414 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Q3UK37 420 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Krt15Q61414 452 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tmem117Q8BH18 514 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Kctd6Q8BNL5 237 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ccser1Q8C0C4 895 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 MtrrQ8C1A3 696 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Kat5Q8CHK4 513 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tspan8Q8R3G9 235 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Prmt7Q922X9 692 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Asic2Q925H0 512 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Six6os1Q9CTN5 574 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Robo3Q9Z2I4 1366 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Vmn2r63E9Q0K5 859 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gm9268E9Q0M3 861 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 SprtnG3X912 497 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Vmn2r62K7N712 859 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 DtnbO70585 659 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 MycP01108 439 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gjc1P28229 396 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Grm1P97772 1199 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 ZbbxQ0P5X5 716 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Klra6Q60653 266 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Elf1Q60775 612 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ush1gQ80T11 461 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Trim65Q8BFW4 522 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Eif4bQ8BGD9 611 aaKnown RBP9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 VcpkmtQ8C436 228 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Csde1Q91W50 798 aaKnown RBP9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tmem39aQ9CYC3 486 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ralgps2Q9ERD6 590 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Elf2Q9JHC9 593 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tlr2Q9QUN7 784 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Trim10Q9WUH5 489 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 Lamb2Q61292 1799 aa9.44□□□□□ -0.9
Trim39-201ENSMUST00000042717 PotegA5H0M4 473 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Efna5O08543 228 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 rp9P97762 213 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Q5XFZ0 217 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Zfp91Q62511 572 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Mcf2lQ64096 1149 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tas2r134Q7TQB0 298 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Slc38a7Q8BWH0 463 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Dclk3Q8BWQ5 790 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Lin9Q8C735 542 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Plagl2Q925T4 496 aa9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Ino80bQ99PT3 375 aaKnown RBP9.43□□□□□ -0.9
Trim39-201ENSMUST00000042717 Zfp623Q9CY99 499 aa9.43□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms