RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C PRE4P30657 266 aa5.54□□□□□ -1.52
VPS4YPR173C SRB6P32570 121 aa5.54□□□□□ -1.52
VPS4YPR173C DOA4P32571 926 aa5.54□□□□□ -1.52
VPS4YPR173C SKN1P33336 771 aa5.54□□□□□ -1.52
VPS4YPR173C PAU24P38155 120 aa5.54□□□□□ -1.52
VPS4YPR173C YBR238CP38330 731 aaKnown RBP5.54□□□□□ -1.52
VPS4YPR173C CHL4P38907 458 aa5.54□□□□□ -1.52
VPS4YPR173C JHD1P40034 492 aa5.54□□□□□ -1.52
VPS4YPR173C YJL068CP40363 299 aa5.54□□□□□ -1.52
VPS4YPR173C LYS12P40495 371 aaKnown RBP5.54□□□□□ -1.52
VPS4YPR173C GLR1P41921 483 aaKnown RBP5.54□□□□□ -1.52
VPS4YPR173C MAL11P53048 616 aa5.54□□□□□ -1.52
VPS4YPR173C MNT2P53059 558 aa5.54□□□□□ -1.52
VPS4YPR173C MEP3P53390 489 aa5.54□□□□□ -1.52
VPS4YPR173C HHO1P53551 258 aa5.54□□□□□ -1.52
VPS4YPR173C PRM1P53835 661 aa5.54□□□□□ -1.52
VPS4YPR173C INN1P53901 409 aa5.54□□□□□ -1.52
VPS4YPR173C YPL014WQ02606 381 aa5.54□□□□□ -1.52
VPS4YPR173C RSM28Q03430 361 aa5.54□□□□□ -1.52
VPS4YPR173C VBA1Q04301 562 aa5.54□□□□□ -1.52
VPS4YPR173C YMR315WQ04869 349 aaKnown RBP5.54□□□□□ -1.52
VPS4YPR173C BOP2Q06150 570 aa5.54□□□□□ -1.52
VPS4YPR173C RSC58Q07979 502 aa5.54□□□□□ -1.52
VPS4YPR173C MED7Q08278 222 aa5.54□□□□□ -1.52
VPS4YPR173C SUT2Q12286 268 aa5.54□□□□□ -1.52
VPS4YPR173C YRM1Q12340 786 aa5.54□□□□□ -1.52
VPS4YPR173C RDI1Q12434 202 aa5.54□□□□□ -1.52
VPS4YPR173C CYC7P00045 113 aa5.53□□□□□ -1.52
VPS4YPR173C RPS17AP02407 136 aaKnown RBP5.53□□□□□ -1.52
VPS4YPR173C RPS17BP14127 136 aaKnown RBP5.53□□□□□ -1.52
VPS4YPR173C MTF1P14908 341 aaKnown RBP5.53□□□□□ -1.52
VPS4YPR173C APN1P22936 367 aa5.53□□□□□ -1.52
VPS4YPR173C YCR061WP25639 631 aa5.53□□□□□ -1.52
VPS4YPR173C MAC1P35192 417 aa5.53□□□□□ -1.52
VPS4YPR173C MRPL36P36531 177 aa5.53□□□□□ -1.52
VPS4YPR173C ATP3P38077 311 aaKnown RBP5.53□□□□□ -1.52
VPS4YPR173C YPT35P38815 214 aaKnown RBP5.53□□□□□ -1.52
VPS4YPR173C YHR122WP38829 231 aa5.53□□□□□ -1.52
VPS4YPR173C AXL2P38928 823 aa5.53□□□□□ -1.52
VPS4YPR173C GGC1P38988 300 aa5.53□□□□□ -1.52
VPS4YPR173C YIL161WP40449 235 aaKnown RBP5.53□□□□□ -1.52
VPS4YPR173C HIS6P40545 261 aa5.53□□□□□ -1.52
VPS4YPR173C POP1P41812 875 aa5.53□□□□□ -1.52
VPS4YPR173C CAF16P43569 289 aa5.53□□□□□ -1.52
VPS4YPR173C BAT2P47176 376 aaKnown RBP5.53□□□□□ -1.52
VPS4YPR173C CGR1P53188 120 aa5.53□□□□□ -1.52
VPS4YPR173C SSY1Q03770 852 aa5.53□□□□□ -1.52
VPS4YPR173C RSF1Q05043 376 aa5.53□□□□□ -1.52
VPS4YPR173C BSP1Q06604 576 aa5.53□□□□□ -1.52
VPS4YPR173C YPQ1Q12010 308 aa5.53□□□□□ -1.52
VPS4YPR173C BTS1Q12051 335 aa5.53□□□□□ -1.52
VPS4YPR173C FRE6Q12473 712 aa5.53□□□□□ -1.52
VPS4YPR173C YDL007C-AQ2V2Q0 85 aa5.53□□□□□ -1.52
VPS4YPR173C STT4P37297 1900 aa5.53□□□□□ -1.52
VPS4YPR173C CDC9P04819 755 aa5.52□□□□□ -1.53
VPS4YPR173C STE7P06784 515 aa5.52□□□□□ -1.53
VPS4YPR173C GCD1P09032 578 aaPredicted RBP5.52□□□□□ -1.53
VPS4YPR173C PDA1P16387 420 aaKnown RBP5.52□□□□□ -1.53
VPS4YPR173C AAC3P18238 307 aa5.52□□□□□ -1.53
VPS4YPR173C PRP2P20095 876 aaPredicted RBP5.52□□□□□ -1.53
VPS4YPR173C LDS1P31379 325 aa5.52□□□□□ -1.53
VPS4YPR173C CDC13P32797 924 aaKnown RBP5.52□□□□□ -1.53
VPS4YPR173C ECT1P33412 323 aa5.52□□□□□ -1.53
VPS4YPR173C GCS1P35197 352 aa5.52□□□□□ -1.53
VPS4YPR173C KKQ8P36004 724 aa5.52□□□□□ -1.53
VPS4YPR173C TUL1P36096 758 aa5.52□□□□□ -1.53
VPS4YPR173C GMH1P36125 273 aa5.52□□□□□ -1.53
VPS4YPR173C PTH1P38876 190 aaKnown RBP5.52□□□□□ -1.53
VPS4YPR173C APQ12P40532 138 aa5.52□□□□□ -1.53
VPS4YPR173C PFA3P42836 336 aa5.52□□□□□ -1.53
VPS4YPR173C PAM16P42949 149 aa5.52□□□□□ -1.53
VPS4YPR173C TAD2P47058 250 aa5.52□□□□□ -1.53
VPS4YPR173C PHB2P50085 310 aa5.52□□□□□ -1.53
VPS4YPR173C DOC1P53068 250 aa5.52□□□□□ -1.53
VPS4YPR173C SDT1P53078 280 aa5.52□□□□□ -1.53
VPS4YPR173C YGL101WP53144 215 aa5.52□□□□□ -1.53
VPS4YPR173C SWC4P53201 476 aa5.52□□□□□ -1.53
VPS4YPR173C CSL4P53859 292 aaPredicted RBP5.52□□□□□ -1.53
VPS4YPR173C PGA1P53896 198 aa5.52□□□□□ -1.53
VPS4YPR173C MTQ1P53944 314 aa5.52□□□□□ -1.53
VPS4YPR173C YMR178WQ03219 274 aaKnown RBP5.52□□□□□ -1.53
VPS4YPR173C SNX41Q04053 625 aa5.52□□□□□ -1.53
VPS4YPR173C KEI1Q06346 221 aa5.52□□□□□ -1.53
VPS4YPR173C YOR289WQ12012 251 aaPredicted RBP5.52□□□□□ -1.53
VPS4YPR173C PER33Q12144 273 aa5.52□□□□□ -1.53
VPS4YPR173C INP53Q12271 1107 aa5.52□□□□□ -1.53
VPS4YPR173C YOS9Q99220 542 aa5.52□□□□□ -1.53
VPS4YPR173C FSH3Q99369 266 aa5.52□□□□□ -1.53
VPS4YPR173C YOL162WP0CF19 215 aa5.51□□□□□ -1.53
VPS4YPR173C DPM1P14020 267 aaKnown RBP5.51□□□□□ -1.53
VPS4YPR173C ERD1P16151 362 aa5.51□□□□□ -1.53
VPS4YPR173C NAM9P27929 486 aa5.51□□□□□ -1.53
VPS4YPR173C ATS1P31386 333 aa5.51□□□□□ -1.53
VPS4YPR173C PRO1P32264 428 aa5.51□□□□□ -1.53
VPS4YPR173C PAU2P32612 120 aa5.51□□□□□ -1.53
VPS4YPR173C EMP24P32803 203 aaKnown RBP5.51□□□□□ -1.53
VPS4YPR173C PPG1P32838 368 aa5.51□□□□□ -1.53
VPS4YPR173C VPS17P32913 551 aa5.51□□□□□ -1.53
VPS4YPR173C SRY1P36007 326 aa5.51□□□□□ -1.53
VPS4YPR173C YKR073CP36153 106 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms