RNA–Protein interactions for RNA: YPR040W

TIP41, Transcript of Protein that interacts with Tap42p, which regulates PP2A, yeast

Gene TIP41, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIP41	YPR040W	PEX34	P25584	144 aa		4.61	□□□□□ -1.67
TIP41	YPR040W	RAD23	P32628	398 aa	Known RBP	4.61	□□□□□ -1.67
TIP41	YPR040W	PEX32	P38292	413 aa		4.61	□□□□□ -1.67
TIP41	YPR040W	YHR218W	P38899	603 aa		4.61	□□□□□ -1.67
TIP41	YPR040W	FET3	P38993	636 aa		4.61	□□□□□ -1.67
TIP41	YPR040W	UTP25	P40498	721 aa	Known RBP	4.61	□□□□□ -1.67
TIP41	YPR040W	CTK3	P46963	296 aa	Predicted RBP	4.61	□□□□□ -1.67
TIP41	YPR040W	YMR111C	Q04461	462 aa	Predicted RBP	4.61	□□□□□ -1.67
TIP41	YPR040W	RRG8	Q06109	277 aa		4.61	□□□□□ -1.67
TIP41	YPR040W	ERV2	Q12284	196 aa		4.61	□□□□□ -1.67
TIP41	YPR040W	STE2	D6VTK4	431 aa		4.6	□□□□□ -1.67
TIP41	YPR040W	MSI1	P13712	422 aa		4.6	□□□□□ -1.67
TIP41	YPR040W	SPO23	P33757	523 aa		4.6	□□□□□ -1.67
TIP41	YPR040W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
TIP41	YPR040W	RVB1	Q03940	463 aa	Known RBP	4.6	□□□□□ -1.67
TIP41	YPR040W	ECM18	Q04623	453 aa		4.6	□□□□□ -1.67
TIP41	YPR040W	CSM3	Q04659	317 aa		4.6	□□□□□ -1.67
TIP41	YPR040W	HRI1	Q05905	244 aa	Known RBP	4.6	□□□□□ -1.67
TIP41	YPR040W	RIF2	Q06208	395 aa		4.6	□□□□□ -1.67
TIP41	YPR040W	PLP2	Q12017	286 aa		4.6	□□□□□ -1.67
TIP41	YPR040W	YPR1	Q12458	312 aa		4.6	□□□□□ -1.67
TIP41	YPR040W	SPT15	P13393	240 aa	Known RBP	4.59	□□□□□ -1.67
TIP41	YPR040W	RSA4	P25382	515 aa	Known RBP	4.59	□□□□□ -1.67
TIP41	YPR040W	RPL16A	P26784	199 aa	Known RBP	4.59	□□□□□ -1.67
TIP41	YPR040W	AVT5	P38176	459 aa		4.59	□□□□□ -1.67
TIP41	YPR040W	LOC1	P43586	204 aa	Predicted RBP	4.59	□□□□□ -1.67
TIP41	YPR040W	TAF6	P53040	516 aa		4.59	□□□□□ -1.67
TIP41	YPR040W	MST27	P53176	234 aa		4.59	□□□□□ -1.67
TIP41	YPR040W	PXR1	P53335	271 aa	Predicted RBP	4.59	□□□□□ -1.67
TIP41	YPR040W	SPO19	Q03029	223 aa		4.59	□□□□□ -1.67
TIP41	YPR040W	DNL4	Q08387	944 aa	Predicted RBP	4.59	□□□□□ -1.67
TIP41	YPR040W	HAP2	P06774	265 aa		4.58	□□□□□ -1.68
TIP41	YPR040W	NAM9	P27929	486 aa		4.58	□□□□□ -1.68
TIP41	YPR040W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
TIP41	YPR040W	HMT1	P38074	348 aa		4.58	□□□□□ -1.68
TIP41	YPR040W	MED6	P38782	295 aa		4.58	□□□□□ -1.68
TIP41	YPR040W	PAN6	P40459	309 aa		4.58	□□□□□ -1.68
TIP41	YPR040W	YCH1	P42937	148 aa		4.58	□□□□□ -1.68
TIP41	YPR040W	YFR057W	P43625	151 aa		4.58	□□□□□ -1.68
TIP41	YPR040W	CIN2	P46670	268 aa		4.58	□□□□□ -1.68
TIP41	YPR040W	GCD14	P46959	383 aa	Predicted RBP	4.58	□□□□□ -1.68
TIP41	YPR040W	REX2	P54964	269 aa	Known RBP	4.58	□□□□□ -1.68
TIP41	YPR040W	YDL114W	Q07530	308 aa		4.58	□□□□□ -1.68
TIP41	YPR040W	SAM4	Q08985	325 aa	Known RBP	4.58	□□□□□ -1.68
TIP41	YPR040W	YDL199C	Q12407	687 aa		4.58	□□□□□ -1.68
TIP41	YPR040W	UBA3	Q99344	299 aa		4.58	□□□□□ -1.68
TIP41	YPR040W	PET123	P17558	318 aa		4.57	□□□□□ -1.68
TIP41	YPR040W	YNL208W	P40159	199 aa	Known RBP	4.57	□□□□□ -1.68
TIP41	YPR040W	SNM1	P40993	198 aa		4.57	□□□□□ -1.68
TIP41	YPR040W	MEP2	P41948	499 aa		4.57	□□□□□ -1.68
TIP41	YPR040W	EGT2	P42835	1041 aa		4.57	□□□□□ -1.68
TIP41	YPR040W	YGL185C	P53100	379 aa		4.57	□□□□□ -1.68
TIP41	YPR040W	TRA1	P38811	3744 aa		4.57	□□□□□ -1.68
TIP41	YPR040W	UTP20	P35194	2493 aa	Known RBP	4.56	□□□□□ -1.68
TIP41	YPR040W	RAD50	P12753	1312 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	CPR3	P25719	182 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	FUN26	P31381	517 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	YKL162C	P36052	402 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	YKL070W	P36087	169 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	YMR262W	P38430	313 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	MMS21	P38632	267 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	DSE1	P40077	573 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	DFG10	P40526	253 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	LOH1	P47055	219 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	BIR1	P47134	954 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	CLD1	P53264	445 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	BOR1	P53838	576 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	APC4	Q04601	652 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	SLF1	Q12034	447 aa	Known RBP	4.56	□□□□□ -1.68
TIP41	YPR040W	YDL109C	Q12103	647 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	IZH2	Q12442	317 aa		4.56	□□□□□ -1.68
TIP41	YPR040W	HEM4	P06174	275 aa		4.55	□□□□□ -1.68
TIP41	YPR040W	RPS18A	P0CX55	146 aa	Known RBP	4.55	□□□□□ -1.68
TIP41	YPR040W	RPS18B	P0CX56	146 aa	Predicted RBP	4.55	□□□□□ -1.68
TIP41	YPR040W	RBK1	P25332	333 aa		4.55	□□□□□ -1.68
TIP41	YPR040W	ARO2	P28777	376 aa	Known RBP	4.55	□□□□□ -1.68
TIP41	YPR040W	HXT1	P32465	570 aa		4.55	□□□□□ -1.68
TIP41	YPR040W	RPC25	P35718	212 aa		4.55	□□□□□ -1.68
TIP41	YPR040W	YKR015C	P36111	568 aa		4.55	□□□□□ -1.68
TIP41	YPR040W	FHL1	P39521	936 aa		4.55	□□□□□ -1.68
TIP41	YPR040W	REE1	P40893	198 aa		4.55	□□□□□ -1.68
TIP41	YPR040W	GTO1	P48239	356 aa		4.55	□□□□□ -1.68
TIP41	YPR040W	RPN14	P53196	417 aa		4.55	□□□□□ -1.68
TIP41	YPR040W	CRH1	P53301	507 aa		4.55	□□□□□ -1.68
TIP41	YPR040W	IMP4	P53941	290 aa	Known RBP	4.55	□□□□□ -1.68
TIP41	YPR040W	ERV41	Q04651	352 aa		4.55	□□□□□ -1.68
TIP41	YPR040W	IRC25	Q07951	179 aa		4.55	□□□□□ -1.68
TIP41	YPR040W	RAD7	P06779	565 aa		4.54	□□□□□ -1.68
TIP41	YPR040W	RPL23A	P0CX41	137 aa	Known RBP	4.54	□□□□□ -1.68
TIP41	YPR040W	RPL23B	P0CX42	137 aa	Known RBP	4.54	□□□□□ -1.68
TIP41	YPR040W	MSS116	P15424	664 aa	Known RBP	4.54	□□□□□ -1.68
TIP41	YPR040W	RPB5	P20434	215 aa		4.54	□□□□□ -1.68
TIP41	YPR040W	CHA1	P25379	360 aa	Known RBP	4.54	□□□□□ -1.68
TIP41	YPR040W	DCC1	P25559	380 aa		4.54	□□□□□ -1.68
TIP41	YPR040W	ERG9	P29704	444 aa		4.54	□□□□□ -1.68
TIP41	YPR040W	ITR2	P30606	609 aa		4.54	□□□□□ -1.68
TIP41	YPR040W	ACB1	P31787	87 aa		4.54	□□□□□ -1.68
TIP41	YPR040W	PEX18	P38855	283 aa		4.54	□□□□□ -1.68
TIP41	YPR040W	YNL320W	P42840	284 aa		4.54	□□□□□ -1.68
TIP41	YPR040W	MND1	P53102	219 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms