RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeast

Gene CBC2, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBC2	YPL178W	YGL235W	P53071	178 aa		4.82	□□□□□ -1.64
CBC2	YPL178W	DAM1	P53267	343 aa		4.82	□□□□□ -1.64
CBC2	YPL178W	COS1	P53822	381 aa		4.82	□□□□□ -1.64
CBC2	YPL178W	DML1	Q03652	475 aa		4.82	□□□□□ -1.64
CBC2	YPL178W	SNO4	Q04902	237 aa		4.82	□□□□□ -1.64
CBC2	YPL178W	NNT1	Q05874	261 aa		4.82	□□□□□ -1.64
CBC2	YPL178W	SNT309	Q06091	175 aa	Predicted RBP	4.82	□□□□□ -1.64
CBC2	YPL178W	GAS2	Q06135	555 aa		4.82	□□□□□ -1.64
CBC2	YPL178W	HSP33	Q08914	237 aa	Known RBP	4.82	□□□□□ -1.64
CBC2	YPL178W	UIP4	Q08926	304 aa		4.82	□□□□□ -1.64
CBC2	YPL178W	HSP32	Q08992	237 aa		4.82	□□□□□ -1.64
CBC2	YPL178W	YRA1	Q12159	226 aa	Known RBP	4.82	□□□□□ -1.64
CBC2	YPL178W	RLM1	Q12224	676 aa		4.82	□□□□□ -1.64
CBC2	YPL178W	PRS5	Q12265	496 aa	Known RBP	4.82	□□□□□ -1.64
CBC2	YPL178W	YLR126C	Q12288	251 aa		4.82	□□□□□ -1.64
CBC2	YPL178W	YDL007C-A	Q2V2Q0	85 aa		4.82	□□□□□ -1.64
CBC2	YPL178W	MHF1	Q3E835	90 aa		4.82	□□□□□ -1.64
CBC2	YPL178W	FLO9	P39712	1322 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	YAL064W-B	O13512	126 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	SIR3	P06701	978 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	RPL43A	P0CX25	92 aa	Known RBP	4.81	□□□□□ -1.64
CBC2	YPL178W	RPL43B	P0CX26	92 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	HAP4	P14064	554 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	TFS1	P14306	219 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	YPK2	P18961	677 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	NFS1	P25374	497 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	YCR100C	P25606	316 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	PRP19	P32523	503 aa	Known RBP	4.81	□□□□□ -1.64
CBC2	YPL178W	MSN4	P33749	630 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	YKL071W	P36086	256 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	SBE22	P38814	852 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	YIL169C	P40442	995 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	XBP1	P40489	647 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	SYG1	P40528	902 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	POP1	P41812	875 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	BUD9	P53226	547 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	RBG2	P53295	368 aa	Known RBP	4.81	□□□□□ -1.64
CBC2	YPL178W	OGG1	P53397	376 aa	Predicted RBP	4.81	□□□□□ -1.64
CBC2	YPL178W	YNR062C	P53748	327 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	SNZ1	Q03148	297 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	HRI1	Q05905	244 aa	Known RBP	4.81	□□□□□ -1.64
CBC2	YPL178W	YLR352W	Q06479	807 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	YOR352W	Q08816	343 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	RKM1	Q08961	583 aa	Predicted RBP	4.81	□□□□□ -1.64
CBC2	YPL178W	BTS1	Q12051	335 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	ERP4	Q12450	207 aa		4.81	□□□□□ -1.64
CBC2	YPL178W	CDC36	P06100	191 aa	Predicted RBP	4.8	□□□□□ -1.64
CBC2	YPL178W	CAR2	P07991	424 aa	Known RBP	4.8	□□□□□ -1.64
CBC2	YPL178W	PET122	P10355	254 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	DPM1	P14020	267 aa	Known RBP	4.8	□□□□□ -1.64
CBC2	YPL178W	SCO1	P23833	295 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	PTC6	P25646	442 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	PEP12	P32854	288 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	NIC96	P34077	839 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	YKL077W	P36081	392 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	YBR138C	P38277	524 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	MGE1	P38523	228 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	CHS7	P38843	316 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	ALP1	P38971	573 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	GDI1	P39958	451 aa	Known RBP	4.8	□□□□□ -1.64
CBC2	YPL178W	YRB2	P40517	327 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	EXG2	P52911	562 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	ALG12	P53730	551 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	COG5	P53951	403 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	HOT1	Q03213	719 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	SPC19	Q03954	165 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	YPQ2	Q06328	317 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	MLC2	Q06580	163 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
CBC2	YPL178W	SPC3	Q12133	184 aa		4.8	□□□□□ -1.64
CBC2	YPL178W	LSO2	Q3E772	92 aa	Known RBP	4.8	□□□□□ -1.64
CBC2	YPL178W	TPK3	P05986	398 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	RPC40	P07703	335 aa	Known RBP	4.79	□□□□□ -1.64
CBC2	YPL178W	MET2	P08465	486 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	CTA1	P15202	515 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	MDH2	P22133	377 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	PTP2	P29461	750 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	PRE2	P30656	287 aa	Known RBP	4.79	□□□□□ -1.64
CBC2	YPL178W	ACP1	P32463	125 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	RPC34	P32910	317 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	ARN2	P38724	620 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	YER184C	P39961	794 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	ISC1	P40015	477 aa	Known RBP	4.79	□□□□□ -1.64
CBC2	YPL178W	RRG9	P40156	214 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	PRE6	P40303	254 aa	Known RBP	4.79	□□□□□ -1.64
CBC2	YPL178W	SWP82	P43554	623 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	IRC7	P43623	340 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	MSY1	P48527	492 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	HSV2	P50079	448 aa	Predicted RBP	4.79	□□□□□ -1.64
CBC2	YPL178W	YGR126W	P53274	230 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	SNF12	P53628	566 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	MPP6	P53725	186 aa	Predicted RBP	4.79	□□□□□ -1.64
CBC2	YPL178W	YNL092W	P53934	400 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	SCS7	Q03529	384 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	RVB1	Q03940	463 aa	Known RBP	4.79	□□□□□ -1.64
CBC2	YPL178W	PLP1	Q04004	230 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	MRPL1	Q04599	285 aa		4.79	□□□□□ -1.64
CBC2	YPL178W	VBA4	Q04602	768 aa	Known RBP	4.79	□□□□□ -1.64
CBC2	YPL178W	NIP7	Q08962	181 aa	Known RBP	4.79	□□□□□ -1.64
CBC2	YPL178W	WTM2	Q12206	467 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms