RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W PAU2P32612 120 aa2.06□□□□□ -2.08
SEC16YPL085W PTR2P32901 601 aa2.06□□□□□ -2.08
SEC16YPL085W MRPL39P36533 70 aa2.06□□□□□ -2.08
SEC16YPL085W PRE6P40303 254 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W ASN2P49090 572 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W YGL185CP53100 379 aa2.06□□□□□ -2.08
SEC16YPL085W YPS7Q06325 596 aa2.06□□□□□ -2.08
SEC16YPL085W SWC7Q06707 132 aa2.06□□□□□ -2.08
SEC16YPL085W RSB1Q08417 382 aa2.06□□□□□ -2.08
SEC16YPL085W ATP16Q12165 160 aa2.06□□□□□ -2.08
SEC16YPL085W RPL7BQ12213 244 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W FLO9P39712 1322 aa2.06□□□□□ -2.08
SEC16YPL085W COX1P00401 534 aa2.06□□□□□ -2.08
SEC16YPL085W HTB1P02293 131 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W SPE1P08432 466 aa2.06□□□□□ -2.08
SEC16YPL085W MET3P08536 511 aa2.06□□□□□ -2.08
SEC16YPL085W ATP10P18496 279 aa2.06□□□□□ -2.08
SEC16YPL085W HNM1P19807 563 aa2.06□□□□□ -2.08
SEC16YPL085W BUD23P25627 275 aaPredicted RBP2.06□□□□□ -2.08
SEC16YPL085W SPT14P32363 452 aa2.06□□□□□ -2.08
SEC16YPL085W AFR1P33304 620 aa2.06□□□□□ -2.08
SEC16YPL085W RGI1P40043 161 aaPredicted RBP2.06□□□□□ -2.08
SEC16YPL085W POG1P40473 351 aa2.06□□□□□ -2.08
SEC16YPL085W CDC40P40968 455 aaPredicted RBP2.06□□□□□ -2.08
SEC16YPL085W CAF16P43569 289 aa2.06□□□□□ -2.08
SEC16YPL085W IRC6P43615 237 aa2.06□□□□□ -2.08
SEC16YPL085W ALB1P47019 175 aaPredicted RBP2.06□□□□□ -2.08
SEC16YPL085W RPN14P53196 417 aa2.06□□□□□ -2.08
SEC16YPL085W YNR048WP53740 393 aa2.06□□□□□ -2.08
SEC16YPL085W YMR155WQ03795 547 aa2.06□□□□□ -2.08
SEC16YPL085W GPB1Q08886 897 aa2.06□□□□□ -2.08
SEC16YPL085W FEX1Q08913 375 aa2.06□□□□□ -2.08
SEC16YPL085W LYS21Q12122 440 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W YPL245WQ12179 454 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W UBX3Q12229 455 aa2.06□□□□□ -2.08
SEC16YPL085W ERG20P08524 352 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W GRR1P24814 1151 aa2.06□□□□□ -2.08
SEC16YPL085W MRPL32P25348 183 aa2.06□□□□□ -2.08
SEC16YPL085W PTC6P25646 442 aa2.06□□□□□ -2.08
SEC16YPL085W CPR5P35176 225 aa2.06□□□□□ -2.08
SEC16YPL085W ARC40P38328 384 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W RPS20P38701 121 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W TDA11P38854 504 aa2.06□□□□□ -2.08
SEC16YPL085W YJL193WP39542 402 aa2.06□□□□□ -2.08
SEC16YPL085W RMD6P39975 231 aa2.06□□□□□ -2.08
SEC16YPL085W PIG2P40187 538 aa2.06□□□□□ -2.08
SEC16YPL085W COX18P53239 316 aa2.06□□□□□ -2.08
SEC16YPL085W YNR064CP53750 290 aa2.06□□□□□ -2.08
SEC16YPL085W YML079WQ03629 201 aa2.06□□□□□ -2.08
SEC16YPL085W TRI1Q05024 226 aa2.06□□□□□ -2.08
SEC16YPL085W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
SEC16YPL085W MED2Q12124 431 aa2.06□□□□□ -2.08
SEC16YPL085W HXK2P04807 486 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W DPB2P24482 689 aaPredicted RBP2.05□□□□□ -2.08
SEC16YPL085W DGR2P32330 852 aa2.05□□□□□ -2.08
SEC16YPL085W MCM10P32354 571 aa2.05□□□□□ -2.08
SEC16YPL085W CAT2P32796 670 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W SRX1P36077 127 aa2.05□□□□□ -2.08
SEC16YPL085W PRS3P38689 320 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W LYS1P38998 373 aaRIP-Chip data2.05□□□□□ -2.08 RIP-Chip
SEC16YPL085W CEM1P39525 442 aa2.05□□□□□ -2.08
SEC16YPL085W SOK1P40317 901 aa2.05□□□□□ -2.08
SEC16YPL085W XBP1P40489 647 aa2.05□□□□□ -2.08
SEC16YPL085W SAS2P40963 338 aa2.05□□□□□ -2.08
SEC16YPL085W MTO1P53070 669 aa2.05□□□□□ -2.08
SEC16YPL085W MPP6P53725 186 aaPredicted RBP2.05□□□□□ -2.08
SEC16YPL085W FYV6P53913 173 aa2.05□□□□□ -2.08
SEC16YPL085W TPS1Q00764 495 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W ACS1Q01574 713 aa2.05□□□□□ -2.08
SEC16YPL085W SED5Q01590 340 aa2.05□□□□□ -2.08
SEC16YPL085W CWC27Q02770 301 aa2.05□□□□□ -2.08
SEC16YPL085W TRS23Q03784 219 aa2.05□□□□□ -2.08
SEC16YPL085W VBA4Q04602 768 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W RAD34Q06665 692 aa2.05□□□□□ -2.08
SEC16YPL085W YDL211CQ12121 372 aa2.05□□□□□ -2.08
SEC16YPL085W YPR011CQ12251 326 aa2.05□□□□□ -2.08
SEC16YPL085W DSF1P0CX08 502 aa2.05□□□□□ -2.08
SEC16YPL085W YNR073CP0CX09 502 aa2.05□□□□□ -2.08
SEC16YPL085W AAC3P18238 307 aa2.05□□□□□ -2.08
SEC16YPL085W YCR007CP25354 239 aa2.05□□□□□ -2.08
SEC16YPL085W ARP2P32381 391 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W AME1P38313 324 aa2.05□□□□□ -2.08
SEC16YPL085W RRG9P40156 214 aa2.05□□□□□ -2.08
SEC16YPL085W PRY3P47033 881 aa2.05□□□□□ -2.08
SEC16YPL085W ADO1P47143 340 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W BUD17P53727 317 aa2.05□□□□□ -2.08
SEC16YPL085W YDR387CQ04162 555 aa2.05□□□□□ -2.08
SEC16YPL085W YDL176WQ12027 708 aa2.05□□□□□ -2.08
SEC16YPL085W COA6Q3E846 104 aa2.05□□□□□ -2.08
SEC16YPL085W USO1P25386 1790 aa2.05□□□□□ -2.08
SEC16YPL085W NFT1P0CE68 1218 aa2.05□□□□□ -2.08
SEC16YPL085W RPB10P22139 70 aa2.05□□□□□ -2.08
SEC16YPL085W SPS18P32572 300 aa2.05□□□□□ -2.08
SEC16YPL085W CSE2P33308 149 aa2.05□□□□□ -2.08
SEC16YPL085W YBL029WP38201 376 aa2.05□□□□□ -2.08
SEC16YPL085W RRN10P38204 145 aa2.05□□□□□ -2.08
SEC16YPL085W YBR242WP38331 238 aa2.05□□□□□ -2.08
SEC16YPL085W MSS4P38994 779 aa2.05□□□□□ -2.08
SEC16YPL085W AIM10P39965 576 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W IBA57P47158 497 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 114.6 ms