RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C SPC34P36131 295 aa2.94□□□□□ -1.94
HRD1YOL013C RCK2P38623 610 aa2.94□□□□□ -1.94
HRD1YOL013C GEP4P38812 185 aa2.94□□□□□ -1.94
HRD1YOL013C RBG1P39729 369 aa2.94□□□□□ -1.94
HRD1YOL013C YER184CP39961 794 aa2.94□□□□□ -1.94
HRD1YOL013C YAT2P40017 923 aa2.94□□□□□ -1.94
HRD1YOL013C DSN1P40568 576 aa2.94□□□□□ -1.94
HRD1YOL013C RTS2P40962 232 aa2.94□□□□□ -1.94
HRD1YOL013C CTK3P46963 296 aaPredicted RBP2.94□□□□□ -1.94
HRD1YOL013C GLG2P47011 380 aa2.94□□□□□ -1.94
HRD1YOL013C HOC1P47124 396 aa2.94□□□□□ -1.94
HRD1YOL013C VBA1Q04301 562 aa2.94□□□□□ -1.94
HRD1YOL013C YDR222WQ04925 415 aa2.94□□□□□ -1.94
HRD1YOL013C MRPL51Q06090 140 aaPredicted RBP2.94□□□□□ -1.94
HRD1YOL013C ASR1Q06834 288 aa2.94□□□□□ -1.94
HRD1YOL013C SGT1Q08446 395 aa2.94□□□□□ -1.94
HRD1YOL013C DAP1Q12091 152 aa2.94□□□□□ -1.94
HRD1YOL013C YLR108CQ12259 485 aa2.94□□□□□ -1.94
HRD1YOL013C STH1P32597 1359 aa2.94□□□□□ -1.94
HRD1YOL013C TSC11P40061 1430 aa2.94□□□□□ -1.94
HRD1YOL013C IRC20Q06554 1556 aa2.93□□□□□ -1.94
HRD1YOL013C YDR157WA0A023PZE8 133 aa2.93□□□□□ -1.94
HRD1YOL013C POX1P13711 748 aa2.93□□□□□ -1.94
HRD1YOL013C STE18P18852 110 aa2.93□□□□□ -1.94
HRD1YOL013C YMR31P19955 123 aa2.93□□□□□ -1.94
HRD1YOL013C MRPL8P22353 238 aa2.93□□□□□ -1.94
HRD1YOL013C YCR043CP25361 127 aa2.93□□□□□ -1.94
HRD1YOL013C YCR022CP25620 114 aa2.93□□□□□ -1.94
HRD1YOL013C TIP1P27654 210 aaPredicted RBP2.93□□□□□ -1.94
HRD1YOL013C ACB1P31787 87 aa2.93□□□□□ -1.94
HRD1YOL013C ACP1P32463 125 aa2.93□□□□□ -1.94
HRD1YOL013C YEF1P32622 495 aa2.93□□□□□ -1.94
HRD1YOL013C TIR2P33890 251 aa2.93□□□□□ -1.94
HRD1YOL013C RSM22P36056 628 aa2.93□□□□□ -1.94
HRD1YOL013C ARC40P38328 384 aaKnown RBP2.93□□□□□ -1.94
HRD1YOL013C YPT35P38815 214 aaKnown RBP2.93□□□□□ -1.94
HRD1YOL013C CSM2P40465 213 aa2.93□□□□□ -1.94
HRD1YOL013C ERG10P41338 398 aaKnown RBP2.93□□□□□ -1.94
HRD1YOL013C TES1P41903 349 aaKnown RBP2.93□□□□□ -1.94
HRD1YOL013C WWM1P43582 211 aaKnown RBP2.93□□□□□ -1.94
HRD1YOL013C VEL1P53058 206 aa2.93□□□□□ -1.94
HRD1YOL013C NOP19P53317 196 aaPredicted RBP2.93□□□□□ -1.94
HRD1YOL013C YNL234WP53857 426 aa2.93□□□□□ -1.94
HRD1YOL013C DIA1P54005 336 aa2.93□□□□□ -1.94
HRD1YOL013C IRC4Q03036 179 aa2.93□□□□□ -1.94
HRD1YOL013C CCE1Q03702 353 aa2.93□□□□□ -1.94
HRD1YOL013C SEC13Q04491 297 aaKnown RBP2.93□□□□□ -1.94
HRD1YOL013C SEY1Q99287 776 aa2.93□□□□□ -1.94
HRD1YOL013C GDB1Q06625 1536 aa2.93□□□□□ -1.94
HRD1YOL013C DOP1Q03921 1698 aa2.93□□□□□ -1.94
HRD1YOL013C HIS1P00498 297 aaKnown RBP2.92□□□□□ -1.94
HRD1YOL013C PAB1P04147 577 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
HRD1YOL013C RPL31AP0C2H8 113 aaKnown RBP2.92□□□□□ -1.94
HRD1YOL013C CKA2P19454 339 aa2.92□□□□□ -1.94
HRD1YOL013C DCC1P25559 380 aa2.92□□□□□ -1.94
HRD1YOL013C POF1P25576 258 aa2.92□□□□□ -1.94
HRD1YOL013C GDH2P33327 1092 aaKnown RBP2.92□□□□□ -1.94
HRD1YOL013C UTP18P40362 594 aaPredicted RBP2.92□□□□□ -1.94
HRD1YOL013C GDS1P41913 522 aa2.92□□□□□ -1.94
HRD1YOL013C RRT5P43607 289 aa2.92□□□□□ -1.94
HRD1YOL013C GWT1P47026 490 aa2.92□□□□□ -1.94
HRD1YOL013C RPC17P47076 161 aa2.92□□□□□ -1.94
HRD1YOL013C YJR030CP47101 745 aa2.92□□□□□ -1.94
HRD1YOL013C JHD2P47156 728 aaPredicted RBP2.92□□□□□ -1.94
HRD1YOL013C AVT4P50944 713 aa2.92□□□□□ -1.94
HRD1YOL013C LSG1P53145 640 aaKnown RBP2.92□□□□□ -1.94
HRD1YOL013C CAF40P53829 373 aa2.92□□□□□ -1.94
HRD1YOL013C IRC15Q02733 499 aa2.92□□□□□ -1.94
HRD1YOL013C TLG2Q08144 397 aa2.92□□□□□ -1.94
HRD1YOL013C TIM18Q08749 192 aa2.92□□□□□ -1.94
HRD1YOL013C SRO7Q12038 1033 aa2.92□□□□□ -1.94
HRD1YOL013C RPP0P05317 312 aaKnown RBP2.92□□□□□ -1.94
HRD1YOL013C SAM2P19358 384 aaKnown RBP2.92□□□□□ -1.94
HRD1YOL013C SLY1P22213 666 aa2.92□□□□□ -1.94
HRD1YOL013C GLC7P32598 312 aaKnown RBP2.92□□□□□ -1.94
HRD1YOL013C YBR137WP38276 179 aa2.92□□□□□ -1.94
HRD1YOL013C YPC1P38298 316 aa2.92□□□□□ -1.94
HRD1YOL013C PRS2P38620 318 aaKnown RBP2.92□□□□□ -1.94
HRD1YOL013C MET30P39014 640 aa2.92□□□□□ -1.94
HRD1YOL013C CDH1P53197 566 aa2.92□□□□□ -1.94
HRD1YOL013C CPD1P53314 239 aa2.92□□□□□ -1.94
HRD1YOL013C RTC4P53850 401 aa2.92□□□□□ -1.94
HRD1YOL013C TDA7P53882 636 aaPredicted RBP2.92□□□□□ -1.94
HRD1YOL013C RPM2Q02773 1202 aa2.92□□□□□ -1.94
HRD1YOL013C ODC1Q03028 310 aa2.92□□□□□ -1.94
HRD1YOL013C YLR281CQ05863 155 aa2.92□□□□□ -1.94
HRD1YOL013C LOT6Q07923 191 aa2.92□□□□□ -1.94
HRD1YOL013C YDL009CQ12210 107 aa2.92□□□□□ -1.94
HRD1YOL013C TPT1Q12272 230 aaKnown RBP2.92□□□□□ -1.94
HRD1YOL013C GEA1P47102 1408 aaPredicted RBP2.91□□□□□ -1.94
HRD1YOL013C ARO1P08566 1588 aaKnown RBP2.91□□□□□ -1.94
HRD1YOL013C NUP159P40477 1460 aa2.91□□□□□ -1.94
HRD1YOL013C RPL27AP0C2H6 136 aaKnown RBP2.91□□□□□ -1.94
HRD1YOL013C RPL27BP0C2H7 136 aaKnown RBP2.91□□□□□ -1.94
HRD1YOL013C RPL42AP0CX27 106 aaKnown RBP2.91□□□□□ -1.94
HRD1YOL013C RPL42BP0CX28 106 aaKnown RBP2.91□□□□□ -1.94
HRD1YOL013C YFL068WP0CX99 160 aa2.91□□□□□ -1.94
HRD1YOL013C YLL066W-AP0CY00 160 aa2.91□□□□□ -1.94
HRD1YOL013C YLL067W-AP0CY01 160 aa2.91□□□□□ -1.94
HRD1YOL013C SPS100P13130 326 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms