RNA–Protein interactions for RNA: YNL312W

RFA2, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeast

Gene RFA2, Length 822 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFA2	YNL312W	YDL199C	Q12407	687 aa		4.75	□□□□□ -1.65
RFA2	YNL312W	PRP46	Q12417	451 aa	Predicted RBP	4.75	□□□□□ -1.65
RFA2	YNL312W	MSI1	P13712	422 aa		4.74	□□□□□ -1.65
RFA2	YNL312W	POP5	P28005	173 aa		4.74	□□□□□ -1.65
RFA2	YNL312W	COT1	P32798	439 aa		4.74	□□□□□ -1.65
RFA2	YNL312W	SDH3	P33421	198 aa		4.74	□□□□□ -1.65
RFA2	YNL312W	ECM8	P38246	354 aa		4.74	□□□□□ -1.65
RFA2	YNL312W	MST27	P53176	234 aa		4.74	□□□□□ -1.65
RFA2	YNL312W	CWC22	P53333	577 aa	Known RBP	4.74	□□□□□ -1.65
RFA2	YNL312W	MTQ1	P53944	314 aa		4.74	□□□□□ -1.65
RFA2	YNL312W	TRM82	Q03774	444 aa		4.74	□□□□□ -1.65
RFA2	YNL312W	RRN11	Q04712	507 aa		4.74	□□□□□ -1.65
RFA2	YNL312W	SAC3	P46674	1301 aa		4.73	□□□□□ -1.65
RFA2	YNL312W	RBK1	P25332	333 aa		4.73	□□□□□ -1.65
RFA2	YNL312W	DAL2	P25335	343 aa		4.73	□□□□□ -1.65
RFA2	YNL312W	CSM1	P25651	190 aa		4.73	□□□□□ -1.65
RFA2	YNL312W	ANR2	P36090	516 aa	Predicted RBP	4.73	□□□□□ -1.65
RFA2	YNL312W	RCK2	P38623	610 aa		4.73	□□□□□ -1.65
RFA2	YNL312W	COX16	P47081	118 aa		4.73	□□□□□ -1.65
RFA2	YNL312W	SCS3	P53012	380 aa		4.73	□□□□□ -1.65
RFA2	YNL312W	YPL080C	Q02826	108 aa		4.73	□□□□□ -1.65
RFA2	YNL312W	ATC1	Q04005	294 aa		4.73	□□□□□ -1.65
RFA2	YNL312W	RTN1	Q04947	295 aa	Known RBP	4.73	□□□□□ -1.65
RFA2	YNL312W	PBA1	Q05778	276 aa		4.73	□□□□□ -1.65
RFA2	YNL312W	YHC1	Q05900	231 aa	Known RBP	4.73	□□□□□ -1.65
RFA2	YNL312W	YDL109C	Q12103	647 aa		4.73	□□□□□ -1.65
RFA2	YNL312W	FRE8	Q12209	686 aa		4.73	□□□□□ -1.65
RFA2	YNL312W	YMR230W-A	Q3E7B5	62 aa		4.73	□□□□□ -1.65
RFA2	YNL312W	DUR1,2	P32528	1835 aa	Known RBP	4.72	□□□□□ -1.65
RFA2	YNL312W	HEM4	P06174	275 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	RPL23A	P0CX41	137 aa	Known RBP	4.72	□□□□□ -1.65
RFA2	YNL312W	RPL23B	P0CX42	137 aa	Known RBP	4.72	□□□□□ -1.65
RFA2	YNL312W	RPL16A	P26784	199 aa	Known RBP	4.72	□□□□□ -1.65
RFA2	YNL312W	TMT1	P32643	299 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	CSE2	P33308	149 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	YMR262W	P38430	313 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	CTM1	P38818	585 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	SPT8	P38915	602 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	HEM14	P40012	539 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	MAM33	P40513	266 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	REE1	P40893	198 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	YFH7	P43591	353 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	BIO3	P50277	480 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	ELP3	Q02908	557 aa	Known RBP	4.72	□□□□□ -1.65
RFA2	YNL312W	YMR027W	Q04371	470 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	PBP4	Q07362	185 aa	Known RBP	4.72	□□□□□ -1.65
RFA2	YNL312W	YOR387C	Q08910	206 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	FDH1	Q08911	376 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	SLF1	Q12034	447 aa	Known RBP	4.72	□□□□□ -1.65
RFA2	YNL312W	APC9	Q12107	265 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	TIP41	Q12199	356 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	MCT1	Q12283	360 aa		4.72	□□□□□ -1.65
RFA2	YNL312W	RAD7	P06779	565 aa		4.71	□□□□□ -1.66
RFA2	YNL312W	COY1	P34237	679 aa		4.71	□□□□□ -1.66
RFA2	YNL312W	BNS1	P50084	137 aa		4.71	□□□□□ -1.66
RFA2	YNL312W	REX2	P54964	269 aa	Known RBP	4.71	□□□□□ -1.66
RFA2	YNL312W	SPP2	Q02521	185 aa		4.71	□□□□□ -1.66
RFA2	YNL312W	RIF2	Q06208	395 aa		4.71	□□□□□ -1.66
RFA2	YNL312W	DDC1	Q08949	612 aa		4.71	□□□□□ -1.66
RFA2	YNL312W	TY3A-G	Q12173	290 aa		4.71	□□□□□ -1.66
RFA2	YNL312W	TY3A-I	Q99219	290 aa		4.71	□□□□□ -1.66
RFA2	YNL312W	RPS18A	P0CX55	146 aa	Known RBP	4.7	□□□□□ -1.66
RFA2	YNL312W	RPS18B	P0CX56	146 aa	Predicted RBP	4.7	□□□□□ -1.66
RFA2	YNL312W	RSR1	P13856	272 aa		4.7	□□□□□ -1.66
RFA2	YNL312W	RPB5	P20434	215 aa		4.7	□□□□□ -1.66
RFA2	YNL312W	FMP46	P36141	133 aa	Known RBP	4.7	□□□□□ -1.66
RFA2	YNL312W	HIS2	P38635	335 aa		4.7	□□□□□ -1.66
RFA2	YNL312W	NDT80	P38830	627 aa		4.7	□□□□□ -1.66
RFA2	YNL312W	HAC1	P41546	238 aa		4.7	□□□□□ -1.66
RFA2	YNL312W	EGT2	P42835	1041 aa		4.7	□□□□□ -1.66
RFA2	YNL312W	PMT4	P46971	762 aa		4.7	□□□□□ -1.66
RFA2	YNL312W	SEH1	P53011	349 aa	Known RBP	4.7	□□□□□ -1.66
RFA2	YNL312W	SHY1	P53266	389 aa		4.7	□□□□□ -1.66
RFA2	YNL312W	SUR7	P54003	302 aa		4.7	□□□□□ -1.66
RFA2	YNL312W	INM2	Q05533	292 aa		4.7	□□□□□ -1.66
RFA2	YNL312W	YLR012C	Q07927	99 aa		4.7	□□□□□ -1.66
RFA2	YNL312W	YPQ1	Q12010	308 aa		4.7	□□□□□ -1.66
RFA2	YNL312W	HTZ1	Q12692	134 aa	Known RBP	4.7	□□□□□ -1.66
RFA2	YNL312W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
RFA2	YNL312W	ATP6	P00854	259 aa		4.69	□□□□□ -1.66
RFA2	YNL312W	REP1	P03871	373 aa		4.69	□□□□□ -1.66
RFA2	YNL312W	RPL24A	P04449	155 aa	Known RBP	4.69	□□□□□ -1.66
RFA2	YNL312W	PMT2	P31382	759 aa		4.69	□□□□□ -1.66
RFA2	YNL312W	GCG1	P32656	232 aa	Known RBP	4.69	□□□□□ -1.66
RFA2	YNL312W	YHR035W	P38769	630 aa		4.69	□□□□□ -1.66
RFA2	YNL312W	FHL1	P39521	936 aa		4.69	□□□□□ -1.66
RFA2	YNL312W	AGP3	P43548	558 aa		4.69	□□□□□ -1.66
RFA2	YNL312W	LSB1	P53281	241 aa		4.69	□□□□□ -1.66
RFA2	YNL312W	NAM2	P11325	894 aa		4.68	□□□□□ -1.66
RFA2	YNL312W	SPT15	P13393	240 aa	Known RBP	4.68	□□□□□ -1.66
RFA2	YNL312W	POL30	P15873	258 aa	Known RBP	4.68	□□□□□ -1.66
RFA2	YNL312W	ITR2	P30606	609 aa		4.68	□□□□□ -1.66
RFA2	YNL312W	IMP3	P32899	183 aa	Predicted RBP	4.68	□□□□□ -1.66
RFA2	YNL312W	COS9	P36034	407 aa		4.68	□□□□□ -1.66
RFA2	YNL312W	HSM3	P38348	480 aa		4.68	□□□□□ -1.66
RFA2	YNL312W	PTH1	P38876	190 aa	Known RBP	4.68	□□□□□ -1.66
RFA2	YNL312W	ATG18	P43601	500 aa		4.68	□□□□□ -1.66
RFA2	YNL312W	YAR1	P46683	200 aa		4.68	□□□□□ -1.66
RFA2	YNL312W	CLD1	P53264	445 aa		4.68	□□□□□ -1.66
RFA2	YNL312W	BOR1	P53838	576 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms