RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP15	YMR304W	BRR2	P32639	2163 aa	Known RBP	2.24	□□□□□ -2.05
UBP15	YMR304W	MDM35	O60200	86 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	FLP1	P03870	423 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	GAL80	P04387	435 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	ERG20	P08524	352 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	CBS1	P14066	229 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	SNF6	P18888	332 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	RRP7	P25368	297 aa	Predicted RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	ILV6	P25605	309 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	PHO91	P27514	894 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	SUA7	P29055	345 aa	Predicted RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	ATP7	P30902	174 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	ATS1	P31386	333 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	PMU1	P36069	295 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	FRM2	P37261	193 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	ICS2	P38284	255 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	TRM5	P38793	499 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	HIS6	P40545	261 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	CUL3	P53202	744 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	NOP19	P53317	196 aa	Predicted RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	OGG1	P53397	376 aa	Predicted RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	MRP51	Q02950	344 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	GAS2	Q06135	555 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	NUT2	Q06213	157 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	CUR1	Q06469	252 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	YPR174C	Q06616	221 aa	Predicted RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	RCL1	Q08096	367 aa	Predicted RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	HRD1	Q08109	551 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	PSY3	Q12318	242 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	SKM1	Q12469	655 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	YPT6	Q99260	215 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	CYC3	P06182	269 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	ASP3-2	P0CX77	362 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	ASP3-3	P0CX78	362 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	ASP3-4	P0CX79	362 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	ASP3-1	P0CZ17	362 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	MRP1	P10662	321 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	IMP2'	P32351	346 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	SKT5	P34226	696 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	BUR6	P40096	142 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	YCH1	P42937	148 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	CWC23	P52868	283 aa	Predicted RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	YGL185C	P53100	379 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	CPR8	P53728	308 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	GAS3	Q03655	524 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	RSF1	Q05043	376 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	YLR053C	Q12026	108 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	YOR283W	Q12040	230 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	GPM3	Q12326	303 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	PTC5	Q12511	572 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	AI5_BETA	Q9ZZX0	354 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	YPT1	P01123	206 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	RPL27A	P0C2H6	136 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	RPL27B	P0C2H7	136 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	CKA1	P15790	372 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	NUP1	P20676	1076 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	IDP1	P21954	428 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	RNA14	P25298	677 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	MIG1	P27705	504 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	YIM1	P28625	365 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	CYS4	P32582	507 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	LSM4	P40070	187 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	MOG1	P47123	218 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	ADO1	P47143	340 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	COS10	P52924	374 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	RIM8	P53179	542 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	DRN1	P53255	507 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	ERV25	P54837	211 aa	Known RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	RPA49	Q01080	415 aa	Predicted RBP	2.23	□□□□□ -2.05
UBP15	YMR304W	ATG39	Q06159	398 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	ASR1	Q06834	288 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	SRL2	Q12020	392 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	TMS1	Q12116	473 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	RKI1	Q12189	258 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	KCS1	Q12494	1050 aa		2.23	□□□□□ -2.05
UBP15	YMR304W	CDC21	P06785	304 aa		2.22	□□□□□ -2.05
UBP15	YMR304W	SAM1	P10659	382 aa	Known RBP	2.22	□□□□□ -2.05
UBP15	YMR304W	HSF1	P10961	833 aa		2.22	□□□□□ -2.05
UBP15	YMR304W	PRE1	P22141	198 aa	Known RBP	2.22	□□□□□ -2.05
UBP15	YMR304W	PBN1	P25580	416 aa		2.22	□□□□□ -2.05
UBP15	YMR304W	PMI40	P29952	429 aa	Known RBP	2.22	□□□□□ -2.05
UBP15	YMR304W	SFC1	P33303	322 aa		2.22	□□□□□ -2.05
UBP15	YMR304W	SHE3	P38272	425 aa	Known RBP	2.22	□□□□□ -2.05
UBP15	YMR304W	MLH1	P38920	769 aa		2.22	□□□□□ -2.05
UBP15	YMR304W	CIN1	P40987	1014 aa		2.22	□□□□□ -2.05
UBP15	YMR304W	USE1	P53146	245 aa		2.22	□□□□□ -2.05
UBP15	YMR304W	DID2	P69771	204 aa		2.22	□□□□□ -2.05
UBP15	YMR304W	YDR415C	Q04033	374 aa	Predicted RBP	2.22	□□□□□ -2.05
UBP15	YMR304W	PEX10	Q05568	337 aa		2.22	□□□□□ -2.05
UBP15	YMR304W	SWC7	Q06707	132 aa		2.22	□□□□□ -2.05
UBP15	YMR304W	RPL15A	P05748	204 aa	Known RBP	2.22	□□□□□ -2.05
UBP15	YMR304W	RRP43	P25359	394 aa	Predicted RBP	2.22	□□□□□ -2.05
UBP15	YMR304W	TAH1	P25638	111 aa	Predicted RBP	2.22	□□□□□ -2.05
UBP15	YMR304W	RRN3	P36070	627 aa		2.22	□□□□□ -2.05
UBP15	YMR304W	URA8	P38627	578 aa	Predicted RBP	2.22	□□□□□ -2.05
UBP15	YMR304W	GPI16	P38875	610 aa		2.22	□□□□□ -2.05
UBP15	YMR304W	RGI1	P40043	161 aa	Predicted RBP	2.22	□□□□□ -2.05
UBP15	YMR304W	YER076C	P40049	302 aa		2.22	□□□□□ -2.05
UBP15	YMR304W	LOC1	P43586	204 aa	Predicted RBP	2.22	□□□□□ -2.05
UBP15	YMR304W	UBP6	P43593	499 aa	Known RBP	2.22	□□□□□ -2.05

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