RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	YDL211C	Q12121	372 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	NSL1	Q12143	216 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	NCE102	Q12207	173 aa	RIP-Chip data	4.18	□□□□□ -1.74	not detected
ATM1	YMR301C	THP2	O13539	261 aa	Known RBP	4.18	□□□□□ -1.74
ATM1	YMR301C	HEM4	P06174	275 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	FAR1	P21268	830 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	SCO1	P23833	295 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	NPL6	P32832	435 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	UTP20	P35194	2493 aa	Known RBP	4.18	□□□□□ -1.74
ATM1	YMR301C	CUE2	P36075	443 aa	Known RBP	4.18	□□□□□ -1.74
ATM1	YMR301C	YHR180W	P38868	163 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	AGX1	P43567	385 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	SEC16	P48415	2195 aa	Known RBP	4.18	□□□□□ -1.74
ATM1	YMR301C	MSY1	P48527	492 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	TWF1	P53250	332 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	COG2	P53271	262 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	SYF2	P53277	215 aa	Predicted RBP	4.18	□□□□□ -1.74
ATM1	YMR301C	YPL039W	Q03080	316 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	HSP31	Q04432	237 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	DYN3	Q04949	312 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	MDM36	Q06820	579 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	MFG1	Q07684	458 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	RDL2	Q08742	149 aa	Known RBP	4.18	□□□□□ -1.74
ATM1	YMR301C	YPR202W	Q08993	238 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	YOR214C	Q12282	236 aa		4.18	□□□□□ -1.74
ATM1	YMR301C	CDC36	P06100	191 aa	Predicted RBP	4.17	□□□□□ -1.74
ATM1	YMR301C	GAL3	P13045	520 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	CSM1	P25651	190 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	EHD3	P28817	500 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	MED8	P38304	223 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	MTC6	P38849	526 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	YFL051C	P43552	160 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	TAF4	P50105	388 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	YAP1802	P53309	568 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	YNR071C	P53757	342 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	IGO1	P53897	168 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	KRE28	Q04431	385 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	BRX1	Q08235	291 aa	Known RBP	4.17	□□□□□ -1.74
ATM1	YMR301C	MCP1	Q12106	302 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	RPP2A	P05319	106 aa	Known RBP	4.17	□□□□□ -1.74
ATM1	YMR301C	PET494	P07390	489 aa	Predicted RBP	4.17	□□□□□ -1.74
ATM1	YMR301C	MET2	P08465	486 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	TFS1	P14306	219 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	PDA1	P16387	420 aa	Known RBP	4.17	□□□□□ -1.74
ATM1	YMR301C	ERD2	P18414	219 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	DBP3	P20447	523 aa	Known RBP	4.17	□□□□□ -1.74
ATM1	YMR301C	ZUO1	P32527	433 aa	Known RBP	4.17	□□□□□ -1.74
ATM1	YMR301C	RRP4	P38792	359 aa	Known RBP	4.17	□□□□□ -1.74
ATM1	YMR301C	CTF8	P38877	133 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	GAT2	P40209	560 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	PEF1	P53238	335 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	API2	Q04413	109 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	SPO77	Q06134	477 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	STP4	Q07351	490 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	HNT3	Q08702	217 aa		4.17	□□□□□ -1.74
ATM1	YMR301C	RTC5	Q12108	567 aa	Known RBP	4.17	□□□□□ -1.74
ATM1	YMR301C	FRS1	P15624	595 aa	Known RBP	4.16	□□□□□ -1.74
ATM1	YMR301C	UTR1	P21373	530 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	CDC10	P25342	322 aa	Known RBP	4.16	□□□□□ -1.74
ATM1	YMR301C	RPN2	P32565	945 aa	Known RBP	4.16	□□□□□ -1.74
ATM1	YMR301C	TIF3	P34167	436 aa	Known RBP	4.16	□□□□□ -1.74
ATM1	YMR301C	YHL037C	P38733	133 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	PET100	P38958	111 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	YMR144W	P40214	342 aa	Known RBP	4.16	□□□□□ -1.74
ATM1	YMR301C	RFC4	P40339	323 aa	Known RBP	4.16	□□□□□ -1.74
ATM1	YMR301C	SDP1	P40479	209 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	MET28	P40573	187 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	HXT9	P40885	567 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	YGR201C	P42936	225 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	SHE4	P51534	789 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	HXT11	P54862	567 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	TIM10	P87108	93 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	VBA4	Q04602	768 aa	Known RBP	4.16	□□□□□ -1.74
ATM1	YMR301C	SNO4	Q04902	237 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	COQ11	Q05892	277 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	HSP33	Q08914	237 aa	Known RBP	4.16	□□□□□ -1.74
ATM1	YMR301C	HSP32	Q08992	237 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	BTS1	Q12051	335 aa		4.16	□□□□□ -1.74
ATM1	YMR301C	GCN4	P03069	281 aa		4.15	□□□□□ -1.74
ATM1	YMR301C	SAC1	P32368	623 aa	Known RBP	4.15	□□□□□ -1.74
ATM1	YMR301C	PUP2	P32379	260 aa		4.15	□□□□□ -1.74
ATM1	YMR301C	CYS4	P32582	507 aa	Known RBP	4.15	□□□□□ -1.74
ATM1	YMR301C	MAL32	P38158	584 aa		4.15	□□□□□ -1.74
ATM1	YMR301C	YBR138C	P38277	524 aa		4.15	□□□□□ -1.74
ATM1	YMR301C	ARN2	P38724	620 aa		4.15	□□□□□ -1.74
ATM1	YMR301C	TRM5	P38793	499 aa		4.15	□□□□□ -1.74
ATM1	YMR301C	YHR097C	P38809	366 aa	Known RBP	4.15	□□□□□ -1.74
ATM1	YMR301C	YGR126W	P53274	230 aa		4.15	□□□□□ -1.74
ATM1	YMR301C	RAF1	Q06891	181 aa		4.15	□□□□□ -1.74
ATM1	YMR301C	YDL109C	Q12103	647 aa		4.15	□□□□□ -1.74
ATM1	YMR301C	DFG16	Q99234	619 aa		4.15	□□□□□ -1.74
ATM1	YMR301C	YAL064W-B	O13512	126 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	CAR2	P07991	424 aa	Known RBP	4.15	□□□□□ -1.75
ATM1	YMR301C	GCD1	P09032	578 aa	Predicted RBP	4.15	□□□□□ -1.75
ATM1	YMR301C	CKA1	P15790	372 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	UGA1	P17649	471 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	COS9	P36034	407 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	RSM22	P36056	628 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	MRPL39	P36533	70 aa		4.15	□□□□□ -1.75
ATM1	YMR301C	AVT7	P40501	490 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 53 ms