RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W FAR8Q05040 523 aa3.97□□□□□ -1.77
RPP0YLR340W SSQ1Q05931 657 aaPredicted RBP3.97□□□□□ -1.77
RPP0YLR340W CSI2Q08054 341 aa3.97□□□□□ -1.77
RPP0YLR340W NTG2Q08214 380 aa3.97□□□□□ -1.77
RPP0YLR340W FIT3Q08907 204 aa3.97□□□□□ -1.77
RPP0YLR340W FRE8Q12209 686 aa3.97□□□□□ -1.77
RPP0YLR340W YHR214C-EQ8TGK0 99 aa3.97□□□□□ -1.77
RPP0YLR340W FSH3Q99369 266 aa3.97□□□□□ -1.77
RPP0YLR340W SOD2P00447 233 aa3.96□□□□□ -1.78
RPP0YLR340W YMR085WP0CF18 432 aa3.96□□□□□ -1.78
RPP0YLR340W RPS23AP0CX29 145 aaKnown RBP3.96□□□□□ -1.78
RPP0YLR340W RPS23BP0CX30 145 aa3.96□□□□□ -1.78
RPP0YLR340W HEM13P11353 328 aaKnown RBP3.96□□□□□ -1.78
RPP0YLR340W GIT1P25346 518 aa3.96□□□□□ -1.78
RPP0YLR340W RPL5P26321 297 aaKnown RBP3.96□□□□□ -1.78
RPP0YLR340W THI4P32318 326 aa3.96□□□□□ -1.78
RPP0YLR340W MDH3P32419 343 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
RPP0YLR340W CLB6P32943 380 aa3.96□□□□□ -1.78
RPP0YLR340W SLC1P33333 303 aa3.96□□□□□ -1.78
RPP0YLR340W HCS1P34243 683 aa3.96□□□□□ -1.78
RPP0YLR340W SHM2P37291 469 aaKnown RBP3.96□□□□□ -1.78
RPP0YLR340W RCK1P38622 512 aa3.96□□□□□ -1.78
RPP0YLR340W SIC1P38634 284 aa3.96□□□□□ -1.78
RPP0YLR340W MNN9P39107 395 aaKnown RBP3.96□□□□□ -1.78
RPP0YLR340W GLR1P41921 483 aaKnown RBP3.96□□□□□ -1.78
RPP0YLR340W NIT3P49954 291 aa3.96□□□□□ -1.78
RPP0YLR340W SHE4P51534 789 aa3.96□□□□□ -1.78
RPP0YLR340W UBC13P52490 153 aa3.96□□□□□ -1.78
RPP0YLR340W MRM2P53123 320 aa3.96□□□□□ -1.78
RPP0YLR340W TWF1P53250 332 aa3.96□□□□□ -1.78
RPP0YLR340W RBG2P53295 368 aaKnown RBP3.96□□□□□ -1.78
RPP0YLR340W YMR279CQ03263 540 aa3.96□□□□□ -1.78
RPP0YLR340W RVB1Q03940 463 aaKnown RBP3.96□□□□□ -1.78
RPP0YLR340W ADH6Q04894 360 aaKnown RBP3.96□□□□□ -1.78
RPP0YLR340W ATG38Q05789 226 aaKnown RBP3.96□□□□□ -1.78
RPP0YLR340W GGA1Q06336 557 aa3.96□□□□□ -1.78
RPP0YLR340W NDL1Q06568 189 aa3.96□□□□□ -1.78
RPP0YLR340W COQ10Q08058 207 aa3.96□□□□□ -1.78
RPP0YLR340W MUM3Q08750 479 aa3.96□□□□□ -1.78
RPP0YLR340W ERP4Q12450 207 aa3.96□□□□□ -1.78
RPP0YLR340W MF(ALPHA)1P01149 165 aa3.95□□□□□ -1.78
RPP0YLR340W RPS16AP0CX51 143 aaKnown RBP3.95□□□□□ -1.78
RPP0YLR340W RPS16BP0CX52 143 aaKnown RBP3.95□□□□□ -1.78
RPP0YLR340W DBP3P20447 523 aaKnown RBP3.95□□□□□ -1.78
RPP0YLR340W ERG4P25340 473 aa3.95□□□□□ -1.78
RPP0YLR340W TRS65P32893 560 aa3.95□□□□□ -1.78
RPP0YLR340W SPT10P35208 640 aa3.95□□□□□ -1.78
RPP0YLR340W ICS2P38284 255 aa3.95□□□□□ -1.78
RPP0YLR340W YHR097CP38809 366 aaKnown RBP3.95□□□□□ -1.78
RPP0YLR340W MPP6P53725 186 aaPredicted RBP3.95□□□□□ -1.78
RPP0YLR340W PRP3Q03338 469 aaPredicted RBP3.95□□□□□ -1.78
RPP0YLR340W RSM24Q03976 319 aa3.95□□□□□ -1.78
RPP0YLR340W YPL191CQ08930 360 aa3.95□□□□□ -1.78
RPP0YLR340W YPR071WQ12346 211 aa3.95□□□□□ -1.78
RPP0YLR340W ARG3P05150 338 aa3.94□□□□□ -1.78
RPP0YLR340W RPS13P05756 151 aaKnown RBP3.94□□□□□ -1.78
RPP0YLR340W TOP3P13099 656 aa3.94□□□□□ -1.78
RPP0YLR340W YPK2P18961 677 aa3.94□□□□□ -1.78
RPP0YLR340W CCA1P21269 546 aa3.94□□□□□ -1.78
RPP0YLR340W GFD2P25370 566 aaKnown RBP3.94□□□□□ -1.78
RPP0YLR340W CAM1P29547 415 aaKnown RBP3.94□□□□□ -1.78
RPP0YLR340W RPC82P32349 654 aa3.94□□□□□ -1.78
RPP0YLR340W TIM12P32830 109 aa3.94□□□□□ -1.78
RPP0YLR340W MDL1P33310 695 aa3.94□□□□□ -1.78
RPP0YLR340W GPX1P36014 167 aa3.94□□□□□ -1.78
RPP0YLR340W YBR138CP38277 524 aa3.94□□□□□ -1.78
RPP0YLR340W PIC2P40035 300 aa3.94□□□□□ -1.78
RPP0YLR340W MET28P40573 187 aa3.94□□□□□ -1.78
RPP0YLR340W DPB11P47027 764 aaPredicted RBP3.94□□□□□ -1.78
RPP0YLR340W YHC3P47040 408 aa3.94□□□□□ -1.78
RPP0YLR340W YJR142WP47173 342 aa3.94□□□□□ -1.78
RPP0YLR340W ARC35P53731 342 aaKnown RBP3.94□□□□□ -1.78
RPP0YLR340W COS1P53822 381 aa3.94□□□□□ -1.78
RPP0YLR340W YNL046WP53956 172 aa3.94□□□□□ -1.78
RPP0YLR340W PET191Q02772 108 aa3.94□□□□□ -1.78
RPP0YLR340W YDR102CQ03864 110 aa3.94□□□□□ -1.78
RPP0YLR340W GMC1Q04399 608 aa3.94□□□□□ -1.78
RPP0YLR340W KRE28Q04431 385 aa3.94□□□□□ -1.78
RPP0YLR340W TAZ1Q06510 381 aa3.94□□□□□ -1.78
RPP0YLR340W NFI1Q12216 726 aa3.94□□□□□ -1.78
RPP0YLR340W NCA2Q12374 616 aa3.94□□□□□ -1.78
RPP0YLR340W HMS1Q12398 434 aa3.94□□□□□ -1.78
RPP0YLR340W IZH2Q12442 317 aa3.94□□□□□ -1.78
RPP0YLR340W RTN2Q12443 393 aa3.94□□□□□ -1.78
RPP0YLR340W SUI3P09064 285 aaKnown RBP3.93□□□□□ -1.78
RPP0YLR340W CNA1P23287 553 aa3.93□□□□□ -1.78
RPP0YLR340W SED4P25365 1065 aa3.93□□□□□ -1.78
RPP0YLR340W YCR051WP25631 222 aa3.93□□□□□ -1.78
RPP0YLR340W MSN4P33749 630 aa3.93□□□□□ -1.78
RPP0YLR340W PEX18P38855 283 aa3.93□□□□□ -1.78
RPP0YLR340W ISC1P40015 477 aaKnown RBP3.93□□□□□ -1.78
RPP0YLR340W MPH1P40562 993 aa3.93□□□□□ -1.78
RPP0YLR340W SNM1P40993 198 aa3.93□□□□□ -1.78
RPP0YLR340W YGR201CP42936 225 aa3.93□□□□□ -1.78
RPP0YLR340W YIP5P53108 310 aa3.93□□□□□ -1.78
RPP0YLR340W SYF2P53277 215 aaPredicted RBP3.93□□□□□ -1.78
RPP0YLR340W TNA1P53322 534 aa3.93□□□□□ -1.78
RPP0YLR340W YPL077CQ02831 240 aa3.93□□□□□ -1.78
RPP0YLR340W MMT1Q03218 510 aa3.93□□□□□ -1.78
RPP0YLR340W TPO3Q06451 622 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms