RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C DCP1Q12517 231 aaPredicted RBP1.6□□□□□ -2.15
SGD1YLR336C ZRT1P32804 376 aa1.59□□□□□ -2.15
SGD1YLR336C YER184CP39961 794 aa1.59□□□□□ -2.15
SGD1YLR336C RRG9P40156 214 aa1.59□□□□□ -2.15
SGD1YLR336C SLM1P40485 686 aa1.59□□□□□ -2.15
SGD1YLR336C YFL012WP43580 148 aa1.59□□□□□ -2.15
SGD1YLR336C FLC3P53121 802 aa1.59□□□□□ -2.15
SGD1YLR336C YGR067CP53243 804 aa1.59□□□□□ -2.15
SGD1YLR336C VOA1P53262 265 aa1.59□□□□□ -2.15
SGD1YLR336C INP1Q03694 420 aa1.59□□□□□ -2.15
SGD1YLR336C RRG8Q06109 277 aa1.59□□□□□ -2.15
SGD1YLR336C SLF1Q12034 447 aaKnown RBP1.59□□□□□ -2.15
SGD1YLR336C COX10P21592 462 aa1.59□□□□□ -2.16
SGD1YLR336C SOP4P39543 234 aaPredicted RBP1.59□□□□□ -2.16
SGD1YLR336C GCD14P46959 383 aaPredicted RBP1.59□□□□□ -2.16
SGD1YLR336C SDS23P53172 527 aa1.59□□□□□ -2.16
SGD1YLR336C FMP48P53233 369 aa1.59□□□□□ -2.16
SGD1YLR336C BIO4P53630 237 aa1.59□□□□□ -2.16
SGD1YLR336C SNX41Q04053 625 aa1.59□□□□□ -2.16
SGD1YLR336C ECM11Q04110 302 aa1.59□□□□□ -2.16
SGD1YLR336C PFK27Q12471 397 aaPredicted RBP1.59□□□□□ -2.16
SGD1YLR336C STE2D6VTK4 431 aa1.58□□□□□ -2.16
SGD1YLR336C RPS19AP07280 144 aaKnown RBP1.58□□□□□ -2.16
SGD1YLR336C RPS19BP07281 144 aaPredicted RBP1.58□□□□□ -2.16
SGD1YLR336C MRPL40P36534 297 aa1.58□□□□□ -2.16
SGD1YLR336C YPC1P38298 316 aa1.58□□□□□ -2.16
SGD1YLR336C YHR035WP38769 630 aa1.58□□□□□ -2.16
SGD1YLR336C PCL7P40186 285 aa1.58□□□□□ -2.16
SGD1YLR336C YGL185CP53100 379 aa1.58□□□□□ -2.16
SGD1YLR336C INP2Q03824 705 aa1.58□□□□□ -2.16
SGD1YLR336C ECM19Q06011 112 aa1.58□□□□□ -2.16
SGD1YLR336C AUS1Q08409 1394 aa1.58□□□□□ -2.16
SGD1YLR336C ERD1P16151 362 aa1.58□□□□□ -2.16
SGD1YLR336C MRPL20P22354 195 aaPredicted RBP1.58□□□□□ -2.16
SGD1YLR336C RPB9P27999 122 aa1.58□□□□□ -2.16
SGD1YLR336C ZRT3P34240 503 aa1.58□□□□□ -2.16
SGD1YLR336C MCH2P36032 473 aa1.58□□□□□ -2.16
SGD1YLR336C RFT1P38206 574 aaPredicted RBP1.58□□□□□ -2.16
SGD1YLR336C YBR062CP38239 180 aa1.58□□□□□ -2.16
SGD1YLR336C EFM1P38732 585 aa1.58□□□□□ -2.16
SGD1YLR336C COQ5P49017 307 aa1.58□□□□□ -2.16
SGD1YLR336C YNR066CP53752 436 aa1.58□□□□□ -2.16
SGD1YLR336C UGA1P17649 471 aa1.57□□□□□ -2.16
SGD1YLR336C SAR1P20606 190 aaKnown RBP1.57□□□□□ -2.16
SGD1YLR336C YKL187CP34231 750 aa1.57□□□□□ -2.16
SGD1YLR336C HIT1P46973 164 aa1.57□□□□□ -2.16
SGD1YLR336C YGR266WP53326 701 aa1.57□□□□□ -2.16
SGD1YLR336C ERV25P54837 211 aaKnown RBP1.57□□□□□ -2.16
SGD1YLR336C SPO19Q03029 223 aa1.57□□□□□ -2.16
SGD1YLR336C APC9Q12107 265 aa1.57□□□□□ -2.16
SGD1YLR336C MRPL23Q12487 163 aaPredicted RBP1.57□□□□□ -2.16
SGD1YLR336C BI3Q9ZZW7 517 aa1.57□□□□□ -2.16
SGD1YLR336C RPL31AP0C2H8 113 aaKnown RBP1.57□□□□□ -2.16
SGD1YLR336C RPL5P26321 297 aaKnown RBP1.57□□□□□ -2.16
SGD1YLR336C GPX1P36014 167 aa1.57□□□□□ -2.16
SGD1YLR336C FRM2P37261 193 aa1.57□□□□□ -2.16
SGD1YLR336C UFE1P41834 346 aa1.57□□□□□ -2.16
SGD1YLR336C YDL211CQ12121 372 aa1.57□□□□□ -2.16
SGD1YLR336C UTP23Q12339 254 aaKnown RBP1.57□□□□□ -2.16
SGD1YLR336C DFM1Q12743 341 aaKnown RBP1.57□□□□□ -2.16
SGD1YLR336C RAD7P06779 565 aa1.56□□□□□ -2.16
SGD1YLR336C GPI12P23797 304 aa1.56□□□□□ -2.16
SGD1YLR336C RPC25P35718 212 aa1.56□□□□□ -2.16
SGD1YLR336C GDS1P41913 522 aa1.56□□□□□ -2.16
SGD1YLR336C LOH1P47055 219 aa1.56□□□□□ -2.16
SGD1YLR336C UTP15Q04305 513 aaKnown RBP1.56□□□□□ -2.16
SGD1YLR336C DTD1Q07648 150 aaKnown RBP1.56□□□□□ -2.16
SGD1YLR336C YOR292CQ08743 309 aa1.56□□□□□ -2.16
SGD1YLR336C SIA1Q12212 622 aa1.56□□□□□ -2.16
SGD1YLR336C FUS3P16892 353 aaKnown RBP1.56□□□□□ -2.16
SGD1YLR336C MEK1P24719 497 aaPredicted RBP1.56□□□□□ -2.16
SGD1YLR336C INO2P26798 304 aa1.56□□□□□ -2.16
SGD1YLR336C BDH1P39714 382 aa1.56□□□□□ -2.16
SGD1YLR336C UBC13P52490 153 aa1.56□□□□□ -2.16
SGD1YLR336C ARP5P53946 755 aa1.56□□□□□ -2.16
SGD1YLR336C ERV41Q04651 352 aa1.56□□□□□ -2.16
SGD1YLR336C TAZ1Q06510 381 aa1.56□□□□□ -2.16
SGD1YLR336C YLR413WQ06689 675 aa1.56□□□□□ -2.16
SGD1YLR336C YPL245WQ12179 454 aaKnown RBP1.56□□□□□ -2.16
SGD1YLR336C GAL7P08431 366 aa1.55□□□□□ -2.16
SGD1YLR336C DAL80P26343 269 aa1.55□□□□□ -2.16
SGD1YLR336C PPQ1P32945 549 aa1.55□□□□□ -2.16
SGD1YLR336C CTM1P38818 585 aa1.55□□□□□ -2.16
SGD1YLR336C VPS45P38932 577 aa1.55□□□□□ -2.16
SGD1YLR336C APC4Q04601 652 aa1.55□□□□□ -2.16
SGD1YLR336C YLR446WQ06204 433 aa1.55□□□□□ -2.16
SGD1YLR336C IES4Q08561 116 aa1.55□□□□□ -2.16
SGD1YLR336C TDH3P00359 332 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
SGD1YLR336C YCR025CP25352 136 aa1.55□□□□□ -2.16
SGD1YLR336C RPL16BP26785 198 aaKnown RBP1.55□□□□□ -2.16
SGD1YLR336C SWD2P36104 329 aaPredicted RBP1.55□□□□□ -2.16
SGD1YLR336C PRY2P36110 329 aa1.55□□□□□ -2.16
SGD1YLR336C YMR262WP38430 313 aa1.55□□□□□ -2.16
SGD1YLR336C COX16P47081 118 aa1.55□□□□□ -2.16
SGD1YLR336C HST4P53688 370 aa1.55□□□□□ -2.16
SGD1YLR336C SEC13Q04491 297 aaKnown RBP1.55□□□□□ -2.16
SGD1YLR336C MRX8Q05473 314 aa1.55□□□□□ -2.16
SGD1YLR336C TDH1P00360 332 aaKnown RBP1.54□□□□□ -2.16
SGD1YLR336C CSM1P25651 190 aa1.54□□□□□ -2.16
SGD1YLR336C IMP3P32899 183 aaPredicted RBP1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms