RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C ZWF1P11412 505 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C RPL24BP24000 155 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C FMT1P32785 401 aa2.19□□□□□ -2.06
VPS13YLL040C PDC2P32896 925 aa2.19□□□□□ -2.06
VPS13YLL040C VBA2P38358 474 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C YHR127WP38833 243 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C GIM3P53900 129 aa2.19□□□□□ -2.06
VPS13YLL040C DID2P69771 204 aa2.19□□□□□ -2.06
VPS13YLL040C LEU9Q12166 604 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C LPX1Q12405 387 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C LEU4P06208 619 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C VPS51P36116 164 aa2.19□□□□□ -2.06
VPS13YLL040C MNT2P53059 558 aa2.19□□□□□ -2.06
VPS13YLL040C PIR1Q03178 341 aa2.19□□□□□ -2.06
VPS13YLL040C YMR265CQ03508 461 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C THI74Q04083 370 aa2.19□□□□□ -2.06
VPS13YLL040C ANT1Q06497 328 aa2.19□□□□□ -2.06
VPS13YLL040C TVP23P38962 199 aa2.19□□□□□ -2.06
VPS13YLL040C BAP3P41815 604 aa2.19□□□□□ -2.06
VPS13YLL040C SKP1P52286 194 aa2.19□□□□□ -2.06
VPS13YLL040C YGR266WP53326 701 aa2.19□□□□□ -2.06
VPS13YLL040C COQ11Q05892 277 aa2.19□□□□□ -2.06
VPS13YLL040C YOL029CQ08187 201 aa2.19□□□□□ -2.06
VPS13YLL040C YPQ1Q12010 308 aa2.19□□□□□ -2.06
VPS13YLL040C INP53Q12271 1107 aa2.19□□□□□ -2.06
VPS13YLL040C CET1O13297 549 aaPredicted RBP2.19□□□□□ -2.06
VPS13YLL040C VMA5P31412 392 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C GPX1P36014 167 aa2.19□□□□□ -2.06
VPS13YLL040C YKR073CP36153 106 aa2.19□□□□□ -2.06
VPS13YLL040C YHR097CP38809 366 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C MRX5P47007 382 aa2.19□□□□□ -2.06
VPS13YLL040C FOL2P51601 243 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C BSC5P53755 489 aa2.19□□□□□ -2.06
VPS13YLL040C ACT1P60010 375 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C TIM44Q01852 431 aa2.19□□□□□ -2.06
VPS13YLL040C MTD1Q02046 320 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C ATG41Q12048 136 aa2.19□□□□□ -2.06
VPS13YLL040C YDL109CQ12103 647 aa2.19□□□□□ -2.06
VPS13YLL040C AI1P03875 834 aa2.19□□□□□ -2.06
VPS13YLL040C PAU19P0CE85 124 aa2.19□□□□□ -2.06
VPS13YLL040C PAU21P0CE86 164 aa2.19□□□□□ -2.06
VPS13YLL040C PAU22P0CE87 164 aa2.19□□□□□ -2.06
VPS13YLL040C YOL162WP0CF19 215 aa2.19□□□□□ -2.06
VPS13YLL040C PAU3P25610 124 aa2.19□□□□□ -2.06
VPS13YLL040C MRT4P33201 236 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C PRP18P33411 251 aaPredicted RBP2.19□□□□□ -2.06
VPS13YLL040C MNL1P38888 796 aa2.19□□□□□ -2.06
VPS13YLL040C PSD1P39006 500 aa2.19□□□□□ -2.06
VPS13YLL040C RHO5P53879 331 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C MTQ2Q03920 221 aaPredicted RBP2.19□□□□□ -2.06
VPS13YLL040C AMD1P15274 810 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C ATS1P31386 333 aa2.19□□□□□ -2.06
VPS13YLL040C MET22P32179 357 aa2.19□□□□□ -2.06
VPS13YLL040C MDH3P32419 343 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
VPS13YLL040C VAM7P32912 316 aa2.19□□□□□ -2.06
VPS13YLL040C SSO2P39926 295 aa2.19□□□□□ -2.06
VPS13YLL040C YEL073CP39974 107 aa2.19□□□□□ -2.06
VPS13YLL040C DOT6P40059 670 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C PHS1P40857 217 aa2.19□□□□□ -2.06
VPS13YLL040C SNP1Q00916 300 aaPredicted RBP2.19□□□□□ -2.06
VPS13YLL040C RRP45Q05636 305 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C PAR32Q12515 295 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C STP22P25604 385 aa2.18□□□□□ -2.06
VPS13YLL040C YCR061WP25639 631 aa2.18□□□□□ -2.06
VPS13YLL040C RFA3P26755 122 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C YBR292CP38357 123 aa2.18□□□□□ -2.06
VPS13YLL040C ARO9P38840 513 aaPredicted RBP2.18□□□□□ -2.06
VPS13YLL040C BPL1P48445 690 aaPredicted RBP2.18□□□□□ -2.06
VPS13YLL040C YGR079WP53249 370 aa2.18□□□□□ -2.06
VPS13YLL040C ASI3P53983 676 aa2.18□□□□□ -2.06
VPS13YLL040C HNT1Q04344 158 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C HBN1Q96VH4 193 aa2.18□□□□□ -2.06
VPS13YLL040C YKR104WP0CE69 306 aa2.18□□□□□ -2.06
VPS13YLL040C RPD3P32561 433 aa2.18□□□□□ -2.06
VPS13YLL040C MRPL36P36531 177 aa2.18□□□□□ -2.06
VPS13YLL040C COG3P40094 801 aa2.18□□□□□ -2.06
VPS13YLL040C YIL108WP40483 696 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C APQ12P40532 138 aa2.18□□□□□ -2.06
VPS13YLL040C SPT20P50875 604 aa2.18□□□□□ -2.06
VPS13YLL040C TMN2Q04562 672 aa2.18□□□□□ -2.06
VPS13YLL040C CTR3Q06686 241 aa2.18□□□□□ -2.06
VPS13YLL040C HAL9Q12180 1030 aa2.18□□□□□ -2.06
VPS13YLL040C AAC1P04710 309 aa2.18□□□□□ -2.06
VPS13YLL040C SST2P11972 698 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C YPK2P18961 677 aa2.18□□□□□ -2.06
VPS13YLL040C BUB3P26449 341 aa2.18□□□□□ -2.06
VPS13YLL040C SNC1P31109 117 aa2.18□□□□□ -2.06
VPS13YLL040C OSH7P38755 437 aa2.18□□□□□ -2.06
VPS13YLL040C YFL066CP43538 392 aa2.18□□□□□ -2.06
VPS13YLL040C RPS12P48589 143 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C SCW4P53334 386 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C DTD1Q07648 150 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C RPL25P04456 142 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C QCR2P07257 368 aa2.18□□□□□ -2.06
VPS13YLL040C ADE1P27616 306 aa2.18□□□□□ -2.06
VPS13YLL040C ACB1P31787 87 aa2.18□□□□□ -2.06
VPS13YLL040C ISC10P32645 267 aa2.18□□□□□ -2.06
VPS13YLL040C PEX2P32800 271 aa2.18□□□□□ -2.06
VPS13YLL040C PUG1P40100 303 aa2.18□□□□□ -2.06
VPS13YLL040C ERG13P54839 491 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms