RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	PCL1	P24867	279 aa		4.29	□□□□□ -1.72
SKG1	YKR100C	CYS4	P32582	507 aa	Known RBP	4.29	□□□□□ -1.72
SKG1	YKR100C	SKT5	P34226	696 aa		4.29	□□□□□ -1.72
SKG1	YKR100C	SEO1	P39709	593 aa		4.29	□□□□□ -1.72
SKG1	YKR100C	EMC2	P47133	292 aa	Known RBP	4.29	□□□□□ -1.72
SKG1	YKR100C	TIM13	P53299	105 aa		4.29	□□□□□ -1.72
SKG1	YKR100C	CGI121	Q03705	181 aa	Known RBP	4.29	□□□□□ -1.72
SKG1	YKR100C	GIR2	Q03768	265 aa	Predicted RBP	4.29	□□□□□ -1.72
SKG1	YKR100C	TSA2	Q04120	196 aa		4.29	□□□□□ -1.72
SKG1	YKR100C	PAR32	Q12515	295 aa	Known RBP	4.29	□□□□□ -1.72
SKG1	YKR100C	REP1	P03871	373 aa		4.28	□□□□□ -1.72
SKG1	YKR100C	ICE2	P40499	491 aa		4.28	□□□□□ -1.72
SKG1	YKR100C	AVT7	P40501	490 aa		4.28	□□□□□ -1.72
SKG1	YKR100C	AGE2	P40529	298 aa		4.28	□□□□□ -1.72
SKG1	YKR100C	SAS2	P40963	338 aa		4.28	□□□□□ -1.72
SKG1	YKR100C	ARF3	P40994	183 aa	RIP-Chip data	4.28	□□□□□ -1.72	not detected
SKG1	YKR100C	TCB2	P48231	1178 aa		4.28	□□□□□ -1.72
SKG1	YKR100C	HST1	P53685	503 aa		4.28	□□□□□ -1.72
SKG1	YKR100C	HAL1	Q01766	294 aa		4.28	□□□□□ -1.72
SKG1	YKR100C	GIP3	Q03016	1276 aa		4.28	□□□□□ -1.72
SKG1	YKR100C	LDB18	Q07887	179 aa		4.28	□□□□□ -1.72
SKG1	YKR100C	CYC3	P06182	269 aa		4.27	□□□□□ -1.73
SKG1	YKR100C	GPH1	P06738	902 aa	Known RBP	4.27	□□□□□ -1.73
SKG1	YKR100C	PUT4	P15380	627 aa		4.27	□□□□□ -1.73
SKG1	YKR100C	HXT3	P32466	567 aa	Known RBP	4.27	□□□□□ -1.73
SKG1	YKR100C	RPT5	P33297	434 aa	Known RBP	4.27	□□□□□ -1.73
SKG1	YKR100C	PRP18	P33411	251 aa	Predicted RBP	4.27	□□□□□ -1.73
SKG1	YKR100C	YIR020C	P40575	100 aa		4.27	□□□□□ -1.73
SKG1	YKR100C	ABM1	P47146	123 aa		4.27	□□□□□ -1.73
SKG1	YKR100C	BIO3	P50277	480 aa		4.27	□□□□□ -1.73
SKG1	YKR100C	API2	Q04413	109 aa		4.27	□□□□□ -1.73
SKG1	YKR100C	SFG1	Q12507	346 aa		4.27	□□□□□ -1.73
SKG1	YKR100C	MGM101	P32787	269 aa	Known RBP	4.26	□□□□□ -1.73
SKG1	YKR100C	PRY2	P36110	329 aa		4.26	□□□□□ -1.73
SKG1	YKR100C	MRPL10	P36520	322 aa		4.26	□□□□□ -1.73
SKG1	YKR100C	YFL051C	P43552	160 aa		4.26	□□□□□ -1.73
SKG1	YKR100C	BRO1	P48582	844 aa		4.26	□□□□□ -1.73
SKG1	YKR100C	PRM15	Q03262	622 aa		4.26	□□□□□ -1.73
SKG1	YKR100C	YOL029C	Q08187	201 aa		4.26	□□□□□ -1.73
SKG1	YKR100C	ORT1	Q12375	292 aa		4.26	□□□□□ -1.73
SKG1	YKR100C	MTR10	Q99189	972 aa		4.26	□□□□□ -1.73
SKG1	YKR100C	HEM4	P06174	275 aa		4.25	□□□□□ -1.73
SKG1	YKR100C	GAL3	P13045	520 aa		4.25	□□□□□ -1.73
SKG1	YKR100C	RPL3	P14126	387 aa	Known RBP	4.25	□□□□□ -1.73
SKG1	YKR100C	YHR045W	P38775	560 aa		4.25	□□□□□ -1.73
SKG1	YKR100C	OAZ1	Q02803	292 aa		4.25	□□□□□ -1.73
SKG1	YKR100C	MIX14	Q04341	121 aa		4.25	□□□□□ -1.73
SKG1	YKR100C	GPM3	Q12326	303 aa		4.25	□□□□□ -1.73
SKG1	YKR100C	MET17	P06106	444 aa		4.24	□□□□□ -1.73
SKG1	YKR100C	POP5	P28005	173 aa		4.24	□□□□□ -1.73
SKG1	YKR100C	KKQ8	P36004	724 aa		4.24	□□□□□ -1.73
SKG1	YKR100C	FRT2	P39734	528 aa		4.24	□□□□□ -1.73
SKG1	YKR100C	TOS3	P43637	560 aa		4.24	□□□□□ -1.73
SKG1	YKR100C	RPE1	P46969	238 aa		4.24	□□□□□ -1.73
SKG1	YKR100C	YNR068C	P53754	272 aa		4.24	□□□□□ -1.73
SKG1	YKR100C	PRP3	Q03338	469 aa	Predicted RBP	4.24	□□□□□ -1.73
SKG1	YKR100C	RIM9	Q04734	239 aa		4.24	□□□□□ -1.73
SKG1	YKR100C	SGT1	Q08446	395 aa		4.24	□□□□□ -1.73
SKG1	YKR100C	LSB5	P25369	354 aa		4.23	□□□□□ -1.73
SKG1	YKR100C	AYR1	P40471	297 aa		4.23	□□□□□ -1.73
SKG1	YKR100C	SEC27	P41811	889 aa	Known RBP	4.23	□□□□□ -1.73
SKG1	YKR100C	HMS2	P47175	358 aa		4.23	□□□□□ -1.73
SKG1	YKR100C	YDL121C	Q07541	149 aa		4.23	□□□□□ -1.73
SKG1	YKR100C	GTT2	Q12390	233 aa		4.23	□□□□□ -1.73
SKG1	YKR100C	YDL012C	Q12489	107 aa		4.23	□□□□□ -1.73
SKG1	YKR100C	PCH2	P38126	564 aa		4.22	□□□□□ -1.73
SKG1	YKR100C	UTP9	P38882	575 aa	Known RBP	4.22	□□□□□ -1.73
SKG1	YKR100C	SNZ3	P43545	298 aa		4.22	□□□□□ -1.73
SKG1	YKR100C	COS5	P47187	383 aa		4.22	□□□□□ -1.73
SKG1	YKR100C	SBH2	P52871	88 aa		4.22	□□□□□ -1.73
SKG1	YKR100C	SNZ2	P53824	298 aa		4.22	□□□□□ -1.73
SKG1	YKR100C	ENT5	Q03769	411 aa	Known RBP	4.22	□□□□□ -1.73
SKG1	YKR100C	IRC25	Q07951	179 aa		4.22	□□□□□ -1.73
SKG1	YKR100C	MMT2	Q08970	484 aa		4.22	□□□□□ -1.73
SKG1	YKR100C	ILV5	P06168	395 aa	Known RBP	4.21	□□□□□ -1.74
SKG1	YKR100C	RFC3	P38629	340 aa		4.21	□□□□□ -1.74
SKG1	YKR100C	OTU2	P38747	307 aa	Known RBP	4.21	□□□□□ -1.74
SKG1	YKR100C	PRP39	P39682	629 aa	Known RBP	4.21	□□□□□ -1.74
SKG1	YKR100C	YJR011C	P47086	261 aa	Predicted RBP	4.21	□□□□□ -1.74
SKG1	YKR100C	BET5	Q03630	159 aa		4.21	□□□□□ -1.74
SKG1	YKR100C	VTA1	Q06263	330 aa		4.21	□□□□□ -1.74
SKG1	YKR100C	RMD5	Q12508	421 aa		4.21	□□□□□ -1.74
SKG1	YKR100C	EFG1	Q3E705	233 aa	Known RBP	4.21	□□□□□ -1.74
SKG1	YKR100C	SEY1	Q99287	776 aa		4.21	□□□□□ -1.74
SKG1	YKR100C	RNA1	P11745	407 aa	Known RBP	4.2	□□□□□ -1.74
SKG1	YKR100C	RPO26	P20435	155 aa		4.2	□□□□□ -1.74
SKG1	YKR100C	CLN1	P20437	546 aa		4.2	□□□□□ -1.74
SKG1	YKR100C	ROX1	P25042	368 aa		4.2	□□□□□ -1.74
SKG1	YKR100C	STP22	P25604	385 aa		4.2	□□□□□ -1.74
SKG1	YKR100C	MRP21	P38175	177 aa		4.2	□□□□□ -1.74
SKG1	YKR100C	ATM1	P40416	690 aa		4.2	□□□□□ -1.74
SKG1	YKR100C	REX4	Q08237	289 aa		4.2	□□□□□ -1.74
SKG1	YKR100C	UIP4	Q08926	304 aa		4.2	□□□□□ -1.74
SKG1	YKR100C	RTR2	Q12378	196 aa		4.2	□□□□□ -1.74
SKG1	YKR100C	PRP46	Q12417	451 aa	Predicted RBP	4.2	□□□□□ -1.74
SKG1	YKR100C	CKA1	P15790	372 aa		4.19	□□□□□ -1.74
SKG1	YKR100C	TAH1	P25638	111 aa	Predicted RBP	4.19	□□□□□ -1.74
SKG1	YKR100C	MIG1	P27705	504 aa		4.19	□□□□□ -1.74
SKG1	YKR100C	UTP25	P40498	721 aa	Known RBP	4.19	□□□□□ -1.74
SKG1	YKR100C	PHO86	P46956	311 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms