RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C PER33Q12144 273 aa1.5□□□□□ -2.17
HIR3YJR140C NCB2Q92317 146 aa1.5□□□□□ -2.17
HIR3YJR140C LAG2Q92325 660 aa1.5□□□□□ -2.17
HIR3YJR140C YOS9Q99220 542 aa1.5□□□□□ -2.17
HIR3YJR140C MHP1P43638 1398 aa1.5□□□□□ -2.17
HIR3YJR140C UTR1P21373 530 aa1.5□□□□□ -2.17
HIR3YJR140C ALK2P32789 676 aaPredicted RBP1.5□□□□□ -2.17
HIR3YJR140C YBR137WP38276 179 aa1.5□□□□□ -2.17
HIR3YJR140C FZO1P38297 855 aa1.5□□□□□ -2.17
HIR3YJR140C NPT1P39683 429 aaKnown RBP1.5□□□□□ -2.17
HIR3YJR140C YRB1P41920 201 aaKnown RBP1.5□□□□□ -2.17
HIR3YJR140C ABZ2Q03266 374 aa1.5□□□□□ -2.17
HIR3YJR140C NDD1Q08887 554 aa1.5□□□□□ -2.17
HIR3YJR140C REP1P03871 373 aa1.5□□□□□ -2.17
HIR3YJR140C CDC50P25656 391 aa1.5□□□□□ -2.17
HIR3YJR140C ANR2P36090 516 aaPredicted RBP1.5□□□□□ -2.17
HIR3YJR140C TOS2P50078 622 aa1.5□□□□□ -2.17
HIR3YJR140C FAR10Q06001 478 aa1.5□□□□□ -2.17
HIR3YJR140C YLR446WQ06204 433 aa1.5□□□□□ -2.17
HIR3YJR140C ASR1Q06834 288 aa1.5□□□□□ -2.17
HIR3YJR140C CSM4Q08955 156 aa1.5□□□□□ -2.17
HIR3YJR140C TDH3P00359 332 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
HIR3YJR140C FRS2P15625 503 aaKnown RBP1.5□□□□□ -2.17
HIR3YJR140C SUA5P32579 426 aa1.5□□□□□ -2.17
HIR3YJR140C CSE2P33308 149 aa1.5□□□□□ -2.17
HIR3YJR140C TPO5P36029 618 aa1.5□□□□□ -2.17
HIR3YJR140C IML3P38265 245 aa1.5□□□□□ -2.17
HIR3YJR140C AIM10P39965 576 aaKnown RBP1.5□□□□□ -2.17
HIR3YJR140C PRE6P40303 254 aaKnown RBP1.5□□□□□ -2.17
HIR3YJR140C YIL067CP40514 678 aa1.5□□□□□ -2.17
HIR3YJR140C CIN2P46670 268 aa1.5□□□□□ -2.17
HIR3YJR140C UBC13P52490 153 aa1.5□□□□□ -2.17
HIR3YJR140C NRM1P53718 249 aa1.5□□□□□ -2.17
HIR3YJR140C BOR1P53838 576 aa1.5□□□□□ -2.17
HIR3YJR140C PRP38Q00723 242 aaPredicted RBP1.5□□□□□ -2.17
HIR3YJR140C YET2Q04210 160 aa1.5□□□□□ -2.17
HIR3YJR140C ATP16Q12165 160 aa1.5□□□□□ -2.17
HIR3YJR140C YOR012WQ12351 137 aa1.5□□□□□ -2.17
HIR3YJR140C YER078W-AQ3E7A2 54 aa1.5□□□□□ -2.17
HIR3YJR140C SEY1Q99287 776 aa1.5□□□□□ -2.17
HIR3YJR140C PEX3P28795 441 aa1.49□□□□□ -2.17
HIR3YJR140C CYM1P32898 989 aa1.49□□□□□ -2.17
HIR3YJR140C MRPL6P32904 214 aa1.49□□□□□ -2.17
HIR3YJR140C BMH2P34730 273 aaKnown RBP1.49□□□□□ -2.17
HIR3YJR140C AIM29P36154 155 aa1.49□□□□□ -2.17
HIR3YJR140C SOP4P39543 234 aaPredicted RBP1.49□□□□□ -2.17
HIR3YJR140C YIL054WP40524 105 aa1.49□□□□□ -2.17
HIR3YJR140C ATG18P43601 500 aa1.49□□□□□ -2.17
HIR3YJR140C YAR1P46683 200 aa1.49□□□□□ -2.17
HIR3YJR140C ASG7P46993 209 aa1.49□□□□□ -2.17
HIR3YJR140C YPT32P51996 222 aaKnown RBP1.49□□□□□ -2.17
HIR3YJR140C CPD1P53314 239 aa1.49□□□□□ -2.17
HIR3YJR140C YML018CQ03730 393 aa1.49□□□□□ -2.17
HIR3YJR140C RNH1Q04740 348 aa1.49□□□□□ -2.17
HIR3YJR140C ATG17Q06410 417 aa1.49□□□□□ -2.17
HIR3YJR140C DET1Q99288 334 aaKnown RBP1.49□□□□□ -2.17
HIR3YJR140C CYC3P06182 269 aa1.49□□□□□ -2.17
HIR3YJR140C EPT1P22140 391 aa1.49□□□□□ -2.17
HIR3YJR140C RRT12P25381 491 aa1.49□□□□□ -2.17
HIR3YJR140C ZUO1P32527 433 aaKnown RBP1.49□□□□□ -2.17
HIR3YJR140C SSO1P32867 290 aa1.49□□□□□ -2.17
HIR3YJR140C MCH2P36032 473 aa1.49□□□□□ -2.17
HIR3YJR140C SLX9P53251 210 aaPredicted RBP1.49□□□□□ -2.17
HIR3YJR140C PET117Q02771 107 aa1.49□□□□□ -2.17
HIR3YJR140C YDR209CQ03480 137 aa1.49□□□□□ -2.17
HIR3YJR140C ARV1Q06541 321 aa1.49□□□□□ -2.17
HIR3YJR140C PBP4Q07362 185 aaKnown RBP1.49□□□□□ -2.17
HIR3YJR140C SNF8Q12483 233 aa1.49□□□□□ -2.17
HIR3YJR140C BGL2P15703 313 aaKnown RBP1.49□□□□□ -2.17
HIR3YJR140C YCR016WP25617 290 aaKnown RBP1.49□□□□□ -2.17
HIR3YJR140C YKL162CP36052 402 aa1.49□□□□□ -2.17
HIR3YJR140C OXA1P39952 402 aa1.49□□□□□ -2.17
HIR3YJR140C UTP18P40362 594 aaPredicted RBP1.49□□□□□ -2.17
HIR3YJR140C ARC18Q05933 178 aaKnown RBP1.49□□□□□ -2.17
HIR3YJR140C SNU23Q12368 194 aaPredicted RBP1.49□□□□□ -2.17
HIR3YJR140C RAD3P06839 778 aa1.49□□□□□ -2.17
HIR3YJR140C RPL31AP0C2H8 113 aaKnown RBP1.49□□□□□ -2.17
HIR3YJR140C SHE1P38200 338 aa1.49□□□□□ -2.17
HIR3YJR140C ECM34P38728 170 aa1.49□□□□□ -2.17
HIR3YJR140C PTI1P39927 425 aaPredicted RBP1.49□□□□□ -2.17
HIR3YJR140C CRH1P53301 507 aa1.49□□□□□ -2.17
HIR3YJR140C RSM27P53305 110 aa1.49□□□□□ -2.17
HIR3YJR140C MSN4P33749 630 aa1.48□□□□□ -2.17
HIR3YJR140C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
HIR3YJR140C IGD1P43598 195 aa1.48□□□□□ -2.17
HIR3YJR140C BNA6P43619 295 aa1.48□□□□□ -2.17
HIR3YJR140C COS1P53822 381 aa1.48□□□□□ -2.17
HIR3YJR140C ASI3P53983 676 aa1.48□□□□□ -2.17
HIR3YJR140C YPL080CQ02826 108 aa1.48□□□□□ -2.17
HIR3YJR140C VHS1Q03785 461 aa1.48□□□□□ -2.17
HIR3YJR140C YMR226CQ05016 267 aaKnown RBP1.48□□□□□ -2.17
HIR3YJR140C SEC10Q06245 871 aa1.48□□□□□ -2.17
HIR3YJR140C RRT8Q08219 342 aa1.48□□□□□ -2.17
HIR3YJR140C FRE8Q12209 686 aa1.48□□□□□ -2.17
HIR3YJR140C PSK1P31374 1356 aa1.48□□□□□ -2.17
HIR3YJR140C CKA2P19454 339 aa1.48□□□□□ -2.17
HIR3YJR140C MRPL25P23369 157 aa1.48□□□□□ -2.17
HIR3YJR140C GGC1P38988 300 aa1.48□□□□□ -2.17
HIR3YJR140C KRE29P40026 464 aa1.48□□□□□ -2.17
HIR3YJR140C RPL10P41805 221 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms