RNA–Protein interactions for RNA: YJL104W

PAM16, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM16, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM16	YJL104W	VPS21	P36017	210 aa	Known RBP	0.85	□□□□□ -2.27
PAM16	YJL104W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	not detected
PAM16	YJL104W	RRN3	P36070	627 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	MRPL39	P36533	70 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	RPL32	P38061	130 aa	Known RBP	0.85	□□□□□ -2.27
PAM16	YJL104W	MAL33	P38157	468 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	LDB7	P38210	180 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	FIG1	P38224	298 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	YMR262W	P38430	313 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	INM1	P38710	295 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	YHR127W	P38833	243 aa	Known RBP	0.85	□□□□□ -2.27
PAM16	YJL104W	PSD1	P39006	500 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	YEL075C	P39972	122 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	YER189W	P40104	122 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	NDE1	P40215	560 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	YIL054W	P40524	105 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	RPL10	P41805	221 aa	Known RBP	0.85	□□□□□ -2.27
PAM16	YJL104W	BUD13	P46947	266 aa	Predicted RBP	0.85	□□□□□ -2.27
PAM16	YJL104W	KEL2	P50090	882 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	ATP22	P50273	684 aa	Predicted RBP	0.85	□□□□□ -2.27
PAM16	YJL104W	YGR067C	P53243	804 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	FRE4	P53746	719 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	YLR460C	P54007	376 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	PET117	Q02771	107 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	SKI8	Q02793	397 aa	Predicted RBP	0.85	□□□□□ -2.27
PAM16	YJL104W	OAZ1	Q02803	292 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	SDC1	Q03323	175 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	PRP3	Q03338	469 aa	Predicted RBP	0.85	□□□□□ -2.27
PAM16	YJL104W	VPS60	Q03390	229 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	EBS1	Q03466	884 aa	Known RBP	0.85	□□□□□ -2.27
PAM16	YJL104W	YDR249C	Q03787	373 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	SXM1	Q04175	944 aa	Known RBP	0.85	□□□□□ -2.27
PAM16	YJL104W	GMC1	Q04399	608 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	YPR147C	Q06522	304 aa	Known RBP	0.85	□□□□□ -2.27
PAM16	YJL104W	SWC7	Q06707	132 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	MFG1	Q07684	458 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	TCO89	Q08921	799 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	MMT2	Q08970	484 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	YDL180W	Q12301	547 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	GPM3	Q12326	303 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	RAX2	Q12465	1220 aa		0.85	□□□□□ -2.27
PAM16	YJL104W	RPS23A	P0CX29	145 aa	Known RBP	0.84	□□□□□ -2.27
PAM16	YJL104W	RPS23B	P0CX30	145 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	CBS1	P14066	229 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	ERD1	P16151	362 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	RPI1	P23250	407 aa	Known RBP	0.84	□□□□□ -2.27
PAM16	YJL104W	YSR3	P23501	404 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	AAT2	P23542	418 aa	Known RBP	0.84	□□□□□ -2.27
PAM16	YJL104W	RPL5	P26321	297 aa	Known RBP	0.84	□□□□□ -2.27
PAM16	YJL104W	SUI1	P32911	108 aa	Known RBP	0.84	□□□□□ -2.27
PAM16	YJL104W	MFT1	P33441	392 aa	Known RBP	0.84	□□□□□ -2.27
PAM16	YJL104W	TIP20	P33891	701 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	CLG1	P35190	452 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	ASC1	P38011	319 aa	Known RBP	0.84	□□□□□ -2.27
PAM16	YJL104W	AST2	P39945	430 aa	Known RBP	0.84	□□□□□ -2.27
PAM16	YJL104W	ATM1	P40416	690 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	YIR020C	P40575	100 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	EGT2	P42835	1041 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	MOB2	P43563	287 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	RPE1	P46969	238 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	STE24	P47154	453 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	BIO3	P50277	480 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	KAP114	P53067	1004 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	YPL107W	Q02873	248 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	GIP3	Q03016	1276 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	PPM1	Q04081	328 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	YMR111C	Q04461	462 aa	Predicted RBP	0.84	□□□□□ -2.27
PAM16	YJL104W	YMR310C	Q04867	317 aa	Predicted RBP	0.84	□□□□□ -2.27
PAM16	YJL104W	DCR2	Q05924	578 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	BUR2	Q05949	395 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	RIF2	Q06208	395 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	YPR174C	Q06616	221 aa	Predicted RBP	0.84	□□□□□ -2.27
PAM16	YJL104W	YLL007C	Q07799	665 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	YOL029C	Q08187	201 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	LDB17	Q12342	491 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	RTR2	Q12378	196 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	ERP4	Q12450	207 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	NOP58	Q12499	511 aa	Known RBP	0.84	□□□□□ -2.27
PAM16	YJL104W	MHF1	Q3E835	90 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	YOL087C	Q99247	1116 aa		0.84	□□□□□ -2.27
PAM16	YJL104W	TIM9	O74700	87 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	COX2	P00410	251 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	TRP1	P00912	224 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	CDC21	P06785	304 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	RNR2	P09938	399 aa	Known RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	NAM2	P11325	894 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	CLN1	P20437	546 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	OLE1	P21147	510 aa	Known RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	UTR1	P21373	530 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	GPI12	P23797	304 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	ROX1	P25042	368 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	GFD2	P25370	566 aa	Known RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	CHA1	P25379	360 aa	Known RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	POL4	P25615	582 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	ITR2	P30606	609 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	PUP2	P32379	260 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	GDH2	P33327	1092 aa	Known RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	PRX1	P34227	261 aa	Known RBP	0.83	□□□□□ -2.28
PAM16	YJL104W	TOM20	P35180	183 aa		0.83	□□□□□ -2.28
PAM16	YJL104W	SPT10	P35208	640 aa		0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms