RNA–Protein interactions for RNA: YIL003W

CFD1, Transcript of Highly conserved iron-sulfur cluster binding protein, yeast

Gene CFD1, Length 882 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CFD1	YIL003W	MTM1	P53320	366 aa		3.12	□□□□□ -1.91
CFD1	YIL003W	TIM11	P81449	96 aa	Predicted RBP	3.12	□□□□□ -1.91
CFD1	YIL003W	NUP116	Q02630	1113 aa		3.12	□□□□□ -1.91
CFD1	YIL003W	IES4	Q08561	116 aa		3.12	□□□□□ -1.91
CFD1	YIL003W	HNT3	Q08702	217 aa		3.12	□□□□□ -1.91
CFD1	YIL003W	PLP2	Q12017	286 aa		3.12	□□□□□ -1.91
CFD1	YIL003W	YPR1	Q12458	312 aa		3.12	□□□□□ -1.91
CFD1	YIL003W	MEX67	Q99257	599 aa	Known RBP	3.12	□□□□□ -1.91
CFD1	YIL003W	COX4	P04037	155 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	SSA3	P09435	649 aa	Known RBP	3.11	□□□□□ -1.91
CFD1	YIL003W	CPR4	P25334	318 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	VMA5	P31412	392 aa	Known RBP	3.11	□□□□□ -1.91
CFD1	YIL003W	RPT5	P33297	434 aa	Known RBP	3.11	□□□□□ -1.91
CFD1	YIL003W	CSE2	P33308	149 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	ECT1	P33412	323 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	CAB3	P36076	571 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	DSE1	P40077	573 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	YER186C	P40101	306 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	PRM5	P40476	318 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	YIL067C	P40514	678 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	INA22	P40576	216 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	IDP2	P41939	412 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	LCB3	P47013	409 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	TRF5	P48561	642 aa	Known RBP	3.11	□□□□□ -1.91
CFD1	YIL003W	TAF6	P53040	516 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	YGR266W	P53326	701 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	PXR1	P53335	271 aa	Predicted RBP	3.11	□□□□□ -1.91
CFD1	YIL003W	LSC1	P53598	329 aa	Known RBP	3.11	□□□□□ -1.91
CFD1	YIL003W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
CFD1	YIL003W	TDA1	Q03533	586 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	RVB1	Q03940	463 aa	Known RBP	3.11	□□□□□ -1.91
CFD1	YIL003W	GRS2	Q06817	618 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	EAF3	Q12432	401 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	FMP16	Q12497	93 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	YCL021W-A	Q96VH3	125 aa		3.11	□□□□□ -1.91
CFD1	YIL003W	DDP1	Q99321	188 aa	Known RBP	3.11	□□□□□ -1.91
CFD1	YIL003W	PIS1	P06197	220 aa	Known RBP	3.1	□□□□□ -1.91
CFD1	YIL003W	GPI12	P23797	304 aa		3.1	□□□□□ -1.91
CFD1	YIL003W	KAR9	P32526	644 aa		3.1	□□□□□ -1.91
CFD1	YIL003W	RAD5	P32849	1169 aa	Predicted RBP	3.1	□□□□□ -1.91
CFD1	YIL003W	TPO5	P36029	618 aa		3.1	□□□□□ -1.91
CFD1	YIL003W	MRPL10	P36520	322 aa		3.1	□□□□□ -1.91
CFD1	YIL003W	YPT35	P38815	214 aa	Known RBP	3.1	□□□□□ -1.91
CFD1	YIL003W	YJR030C	P47101	745 aa		3.1	□□□□□ -1.91
CFD1	YIL003W	MPP6	P53725	186 aa	Predicted RBP	3.1	□□□□□ -1.91
CFD1	YIL003W	YNL260C	P53846	198 aa		3.1	□□□□□ -1.91
CFD1	YIL003W	ALG11	P53954	548 aa	Known RBP	3.1	□□□□□ -1.91
CFD1	YIL003W	CRZ1	P53968	678 aa		3.1	□□□□□ -1.91
CFD1	YIL003W	YMR102C	Q03177	834 aa		3.1	□□□□□ -1.91
CFD1	YIL003W	PRM6	Q04705	352 aa		3.1	□□□□□ -1.91
CFD1	YIL003W	SMD2	Q06217	110 aa	Known RBP	3.1	□□□□□ -1.91
CFD1	YIL003W	ESA1	Q08649	445 aa		3.1	□□□□□ -1.91
CFD1	YIL003W	SGT2	Q12118	346 aa	Known RBP	3.1	□□□□□ -1.91
CFD1	YIL003W	UNG1	P12887	359 aa		3.09	□□□□□ -1.91
CFD1	YIL003W	VPS3	P23643	1011 aa		3.09	□□□□□ -1.91
CFD1	YIL003W	DCC1	P25559	380 aa		3.09	□□□□□ -1.91
CFD1	YIL003W	PEX34	P25584	144 aa		3.09	□□□□□ -1.91
CFD1	YIL003W	RPL5	P26321	297 aa	Known RBP	3.09	□□□□□ -1.91
CFD1	YIL003W	ERG9	P29704	444 aa		3.09	□□□□□ -1.91
CFD1	YIL003W	ECM8	P38246	354 aa		3.09	□□□□□ -1.91
CFD1	YIL003W	MMS21	P38632	267 aa		3.09	□□□□□ -1.91
CFD1	YIL003W	SMC2	P38989	1170 aa	Known RBP	3.09	□□□□□ -1.91
CFD1	YIL003W	SCC4	P40090	624 aa		3.09	□□□□□ -1.91
CFD1	YIL003W	EMC2	P47133	292 aa	Known RBP	3.09	□□□□□ -1.91
CFD1	YIL003W	LSG1	P53145	640 aa	Known RBP	3.09	□□□□□ -1.91
CFD1	YIL003W	YLL007C	Q07799	665 aa		3.09	□□□□□ -1.91
CFD1	YIL003W	LOT6	Q07923	191 aa		3.09	□□□□□ -1.91
CFD1	YIL003W	SAM4	Q08985	325 aa	Known RBP	3.09	□□□□□ -1.91
CFD1	YIL003W	YGK3	Q12222	375 aa	Predicted RBP	3.09	□□□□□ -1.91
CFD1	YIL003W	PCL9	Q12477	304 aa		3.09	□□□□□ -1.91
CFD1	YIL003W	YER078W-A	Q3E7A2	54 aa		3.09	□□□□□ -1.91
CFD1	YIL003W	TDH1	P00360	332 aa	Known RBP	3.08	□□□□□ -1.92
CFD1	YIL003W	CSM1	P25651	190 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	ACB1	P31787	87 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	SPR1	P32603	445 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	CSE1	P33307	960 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	SPO23	P33757	523 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	COY1	P34237	679 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	DTR1	P38125	572 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	AVT5	P38176	459 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	RFT1	P38206	574 aa	Predicted RBP	3.08	□□□□□ -1.92
CFD1	YIL003W	YMR262W	P38430	313 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	SIP3	P38717	1229 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	SMF2	P38778	549 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	AGX1	P43567	385 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	AIM24	P47127	394 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	YJR085C	P47131	105 aa	Known RBP	3.08	□□□□□ -1.92
CFD1	YIL003W	MKC7	P53379	596 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	BIO4	P53630	237 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	PGA2	P53903	129 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	IMP4	P53941	290 aa	Known RBP	3.08	□□□□□ -1.92
CFD1	YIL003W	YMR317W	Q04893	1140 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	BCP1	Q06338	283 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	TSR1	Q07381	788 aa	Known RBP	3.08	□□□□□ -1.92
CFD1	YIL003W	PPT2	Q12036	173 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	FCY22	Q12119	530 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	UBA3	Q99344	299 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	MSB2	P32334	1306 aa		3.08	□□□□□ -1.92
CFD1	YIL003W	PRP8	P33334	2413 aa	Known RBP	3.08	□□□□□ -1.92
CFD1	YIL003W	RPL22A	P05749	121 aa	Known RBP	3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms