RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C EGT2P42835 1041 aa6.31□□□□□ -1.4
PUP2YGR253C NIT3P49954 291 aa6.31□□□□□ -1.4
PUP2YGR253C UBC13P52490 153 aa6.31□□□□□ -1.4
PUP2YGR253C SUB1P54000 292 aaKnown RBP6.31□□□□□ -1.4
PUP2YGR253C CIK1Q01649 594 aa6.31□□□□□ -1.4
PUP2YGR253C AGE1Q04412 482 aa6.31□□□□□ -1.4
PUP2YGR253C SEC13Q04491 297 aaKnown RBP6.31□□□□□ -1.4
PUP2YGR253C HRT1Q08273 121 aa6.31□□□□□ -1.4
PUP2YGR253C FIT3Q08907 204 aa6.31□□□□□ -1.4
PUP2YGR253C ULA1Q12059 462 aa6.31□□□□□ -1.4
PUP2YGR253C RTR2Q12378 196 aa6.31□□□□□ -1.4
PUP2YGR253C RPL15AP05748 204 aaKnown RBP6.3□□□□□ -1.4
PUP2YGR253C CNA1P23287 553 aa6.3□□□□□ -1.4
PUP2YGR253C PRP28P23394 588 aa6.3□□□□□ -1.4
PUP2YGR253C PRE2P30656 287 aaKnown RBP6.3□□□□□ -1.4
PUP2YGR253C CLB6P32943 380 aa6.3□□□□□ -1.4
PUP2YGR253C PEX6P33760 1030 aa6.3□□□□□ -1.4
PUP2YGR253C YKL077WP36081 392 aa6.3□□□□□ -1.4
PUP2YGR253C NAB3P38996 802 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
PUP2YGR253C RCY1P39531 840 aa6.3□□□□□ -1.4
PUP2YGR253C MPM1P40364 252 aa6.3□□□□□ -1.4
PUP2YGR253C VHR1P40522 640 aa6.3□□□□□ -1.4
PUP2YGR253C NAS2P40555 220 aa6.3□□□□□ -1.4
PUP2YGR253C BAT2P47176 376 aaKnown RBP6.3□□□□□ -1.4
PUP2YGR253C DUG3P53871 357 aa6.3□□□□□ -1.4
PUP2YGR253C RPL15BP54780 204 aaPredicted RBP6.3□□□□□ -1.4
PUP2YGR253C GPI11Q06636 219 aa6.3□□□□□ -1.4
PUP2YGR253C PSR1Q07800 427 aa6.3□□□□□ -1.4
PUP2YGR253C HAP4P14064 554 aa6.29□□□□□ -1.4
PUP2YGR253C SED4P25365 1065 aa6.29□□□□□ -1.4
PUP2YGR253C IDH1P28834 360 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
PUP2YGR253C MDH3P32419 343 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
PUP2YGR253C PUB1P32588 453 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
PUP2YGR253C MNS1P32906 549 aa6.29□□□□□ -1.4
PUP2YGR253C MRPL16P38064 232 aa6.29□□□□□ -1.4
PUP2YGR253C RIB1P38066 345 aa6.29□□□□□ -1.4
PUP2YGR253C SRO77P38163 1010 aa6.29□□□□□ -1.4
PUP2YGR253C HEK2P38199 381 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
PUP2YGR253C GPI1P53306 609 aa6.29□□□□□ -1.4
PUP2YGR253C DML1Q03652 475 aa6.29□□□□□ -1.4
PUP2YGR253C SNO4Q04902 237 aa6.29□□□□□ -1.4
PUP2YGR253C SNT309Q06091 175 aaPredicted RBP6.29□□□□□ -1.4
PUP2YGR253C ATG26Q06321 1198 aa6.29□□□□□ -1.4
PUP2YGR253C HSP33Q08914 237 aaKnown RBP6.29□□□□□ -1.4
PUP2YGR253C HSP32Q08992 237 aa6.29□□□□□ -1.4
PUP2YGR253C RDL1Q12305 139 aaKnown RBP6.29□□□□□ -1.4
PUP2YGR253C APC2Q12440 853 aa6.29□□□□□ -1.4
PUP2YGR253C IZH2Q12442 317 aa6.29□□□□□ -1.4
PUP2YGR253C TIM9O74700 87 aa6.28□□□□□ -1.4
PUP2YGR253C MSS18P08593 268 aa6.28□□□□□ -1.4
PUP2YGR253C YOL162WP0CF19 215 aa6.28□□□□□ -1.4
PUP2YGR253C URE2P23202 354 aaKnown RBP6.28□□□□□ -1.4
PUP2YGR253C PAD1P33751 242 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
PUP2YGR253C NIC96P34077 839 aa6.28□□□□□ -1.4
PUP2YGR253C ALP1P38971 573 aa6.28□□□□□ -1.4
PUP2YGR253C GET1P53192 235 aa6.28□□□□□ -1.4
PUP2YGR253C YNL165WP53891 406 aa6.28□□□□□ -1.4
PUP2YGR253C LAP3Q01532 483 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
PUP2YGR253C YPL077CQ02831 240 aa6.28□□□□□ -1.4
PUP2YGR253C RRN5Q02983 363 aa6.28□□□□□ -1.4
PUP2YGR253C YMR102CQ03177 834 aa6.28□□□□□ -1.4
PUP2YGR253C NDL1Q06568 189 aa6.28□□□□□ -1.4
PUP2YGR253C YER145C-AA0A023PYF4 145 aa6.27□□□□□ -1.41
PUP2YGR253C PRP4P20053 465 aaKnown RBP6.27□□□□□ -1.41
PUP2YGR253C CMK2P22517 447 aa6.27□□□□□ -1.41
PUP2YGR253C PPA2P28239 310 aa6.27□□□□□ -1.41
PUP2YGR253C ASF2P32448 525 aaPredicted RBP6.27□□□□□ -1.41
PUP2YGR253C HCS1P34243 683 aa6.27□□□□□ -1.41
PUP2YGR253C SPT10P35208 640 aa6.27□□□□□ -1.41
PUP2YGR253C ABM1P47146 123 aa6.27□□□□□ -1.41
PUP2YGR253C PEF1P53238 335 aa6.27□□□□□ -1.41
PUP2YGR253C TNA1P53322 534 aa6.27□□□□□ -1.41
PUP2YGR253C PET191Q02772 108 aa6.27□□□□□ -1.41
PUP2YGR253C TFB3Q03290 321 aa6.27□□□□□ -1.41
PUP2YGR253C HMO1Q03973 246 aaKnown RBP6.27□□□□□ -1.41
PUP2YGR253C PEX12Q04370 399 aa6.27□□□□□ -1.41
PUP2YGR253C IPK1Q06667 281 aa6.27□□□□□ -1.41
PUP2YGR253C GAT3Q07928 141 aa6.27□□□□□ -1.41
PUP2YGR253C MIM1Q08176 113 aa6.27□□□□□ -1.41
PUP2YGR253C SIR3P06701 978 aa6.26□□□□□ -1.41
PUP2YGR253C RPS23AP0CX29 145 aaKnown RBP6.26□□□□□ -1.41
PUP2YGR253C RPS23BP0CX30 145 aa6.26□□□□□ -1.41
PUP2YGR253C MSI1P13712 422 aa6.26□□□□□ -1.41
PUP2YGR253C DBF2P22204 572 aa6.26□□□□□ -1.41
PUP2YGR253C RPS5P26783 225 aaKnown RBP6.26□□□□□ -1.41
PUP2YGR253C NTG1P31378 399 aa6.26□□□□□ -1.41
PUP2YGR253C VPH2P32341 215 aa6.26□□□□□ -1.41
PUP2YGR253C YER188WP40103 239 aa6.26□□□□□ -1.41
PUP2YGR253C MIG2P53035 382 aa6.26□□□□□ -1.41
PUP2YGR253C COS1P53822 381 aa6.26□□□□□ -1.41
PUP2YGR253C YDR387CQ04162 555 aa6.26□□□□□ -1.41
PUP2YGR253C HFD1Q04458 532 aa6.26□□□□□ -1.41
PUP2YGR253C BCP1Q06338 283 aa6.26□□□□□ -1.41
PUP2YGR253C SWA2Q06677 668 aa6.26□□□□□ -1.41
PUP2YGR253C SNA4Q07549 140 aa6.26□□□□□ -1.41
PUP2YGR253C MSA1Q08471 629 aa6.26□□□□□ -1.41
PUP2YGR253C SNX3Q08826 162 aaKnown RBP6.26□□□□□ -1.41
PUP2YGR253C FSH3Q99369 266 aa6.26□□□□□ -1.41
PUP2YGR253C SHM2P37291 469 aaKnown RBP6.25□□□□□ -1.41
PUP2YGR253C QDR1P40475 563 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms