RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFK1	YGR240C	MTL1	P53214	551 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	COS6	P53344	381 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	COG5	P53951	403 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	USB1	Q12208	290 aa	Known RBP	4.09	□□□□□ -1.75
PFK1	YGR240C	YMR085W	P0CF18	432 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
PFK1	YGR240C	PRE7	P23724	241 aa	Known RBP	4.09	□□□□□ -1.75
PFK1	YGR240C	KIN82	P25341	720 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	APN2	P38207	520 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	PRS3	P38689	320 aa	Known RBP	4.09	□□□□□ -1.75
PFK1	YGR240C	GIC1	P38785	314 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	AIM2	P39721	246 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	COX15	P40086	486 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	UFD1	P53044	361 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	SLU7	Q02775	382 aa	Known RBP	4.09	□□□□□ -1.75
PFK1	YGR240C	COQ11	Q05892	277 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	YPR196W	Q06595	470 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	MHR1	Q06630	226 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	PLB3	Q08108	686 aa		4.09	□□□□□ -1.75
PFK1	YGR240C	MF(ALPHA)1	P01149	165 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	CUP2	P15315	225 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	RPB8	P20436	146 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	FUB1	P25659	250 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	EHD3	P28817	500 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	PRE2	P30656	287 aa	Known RBP	4.08	□□□□□ -1.76
PFK1	YGR240C	TFC1	P32367	649 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	RGT1	P32862	1170 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	GPI16	P38875	610 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	DLD3	P39976	496 aa	Known RBP	4.08	□□□□□ -1.76
PFK1	YGR240C	BMT5	P40493	336 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	TAX4	P47030	604 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	GCV1	P48015	400 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	SKP1	P52286	194 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	TIM8	P57744	87 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	SAE3	P89114	91 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	ABF2	Q02486	183 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	DPP1	Q05521	289 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	HRD3	Q05787	833 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	IES4	Q08561	116 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	YOR114W	Q12219	294 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	NCA2	Q12374	616 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	IPP1	P00817	287 aa	Known RBP	4.08	□□□□□ -1.76
PFK1	YGR240C	NAM2	P11325	894 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	RNA14	P25298	677 aa	Known RBP	4.08	□□□□□ -1.76
PFK1	YGR240C	FEN2	P25621	512 aa	Known RBP	4.08	□□□□□ -1.76
PFK1	YGR240C	IES6	P32617	166 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	ASH1	P34233	588 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	EHT1	P38295	451 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	POP4	P38336	279 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	RCK2	P38623	610 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	RBG1	P39729	369 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	TRS85	P46944	698 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	ERG13	P54839	491 aa	Known RBP	4.08	□□□□□ -1.76
PFK1	YGR240C	CSN9	Q03981	162 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	OPT2	Q06593	877 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	ASR1	Q06834	288 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	SIA1	Q12212	622 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	ADE5,7	P07244	802 aa	Known RBP	4.08	□□□□□ -1.76
PFK1	YGR240C	MET2	P08465	486 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	SPC34	P36131	295 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	ARO9	P38840	513 aa	Predicted RBP	4.08	□□□□□ -1.76
PFK1	YGR240C	YHR177W	P38867	453 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	PSA1	P41940	361 aa	Known RBP	4.08	□□□□□ -1.76
PFK1	YGR240C	YGR210C	P42942	411 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	LSB6	P42951	607 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	JJJ3	P47138	172 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	PUS2	P53167	370 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	IBD2	P53892	351 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	DID2	P69771	204 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	NRG1	Q03125	231 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	TPO3	Q06451	622 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	POS5	Q06892	414 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	POM34	Q12445	299 aa		4.08	□□□□□ -1.76
PFK1	YGR240C	COX3	P00420	269 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	URK1	P27515	501 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	ATO2	P32907	282 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	MRPL16	P38064	232 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	PRE3	P38624	215 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	DHH1	P39517	506 aa	Known RBP	4.07	□□□□□ -1.76
PFK1	YGR240C	VPS52	P39904	641 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	MID1	P41821	548 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	JAC1	P53193	184 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	GTR2	P53290	341 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	AIM34	Q03673	198 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	AIM41	Q12032	185 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	APC9	Q12107	265 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	JLP1	Q12358	412 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	SNU23	Q12368	194 aa	Predicted RBP	4.07	□□□□□ -1.76
PFK1	YGR240C	GPA2	P10823	449 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	SCL1	P21243	252 aa	Known RBP	4.07	□□□□□ -1.76
PFK1	YGR240C	HCM1	P25364	564 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	VHC1	P38329	1120 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	DDI1	P40087	428 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	PDS1	P40316	373 aa	Predicted RBP	4.07	□□□□□ -1.76
PFK1	YGR240C	GPI14	P47088	403 aa	Known RBP	4.07	□□□□□ -1.76
PFK1	YGR240C	OST6	Q03723	332 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	ZEO1	Q08245	113 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	AIM45	Q12480	344 aa	Known RBP	4.07	□□□□□ -1.76
PFK1	YGR240C	SLO1	Q3E784	85 aa		4.07	□□□□□ -1.76
PFK1	YGR240C	RPP1A	P05318	106 aa	Predicted RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms