RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C VOA1P53262 265 aa3.49□□□□□ -1.85
SCL1YGL011C UBX2Q04228 584 aa3.49□□□□□ -1.85
SCL1YGL011C RRG8Q06109 277 aa3.49□□□□□ -1.85
SCL1YGL011C PRM4Q12498 284 aa3.49□□□□□ -1.85
SCL1YGL011C RAD23P32628 398 aaKnown RBP3.48□□□□□ -1.85
SCL1YGL011C LOC1P43586 204 aaPredicted RBP3.48□□□□□ -1.85
SCL1YGL011C PBP4Q07362 185 aaKnown RBP3.48□□□□□ -1.85
SCL1YGL011C ERD1P16151 362 aa3.47□□□□□ -1.85
SCL1YGL011C MRPL40P36534 297 aa3.47□□□□□ -1.85
SCL1YGL011C RRF1P38771 230 aa3.47□□□□□ -1.85
SCL1YGL011C YGR067CP53243 804 aa3.47□□□□□ -1.85
SCL1YGL011C INP1Q03694 420 aa3.47□□□□□ -1.85
SCL1YGL011C YMR244WQ04018 355 aa3.47□□□□□ -1.85
SCL1YGL011C SNX41Q04053 625 aa3.47□□□□□ -1.85
SCL1YGL011C DTD1Q07648 150 aaKnown RBP3.47□□□□□ -1.85
SCL1YGL011C DCP1Q12517 231 aaPredicted RBP3.47□□□□□ -1.85
SCL1YGL011C AUS1Q08409 1394 aa3.47□□□□□ -1.85
SCL1YGL011C MRPL20P22354 195 aaPredicted RBP3.46□□□□□ -1.86
SCL1YGL011C YHR035WP38769 630 aa3.46□□□□□ -1.86
SCL1YGL011C RRG9P40156 214 aa3.46□□□□□ -1.86
SCL1YGL011C LOH1P47055 219 aa3.46□□□□□ -1.86
SCL1YGL011C COQ5P49017 307 aa3.46□□□□□ -1.86
SCL1YGL011C SDS23P53172 527 aa3.46□□□□□ -1.86
SCL1YGL011C BIO4P53630 237 aa3.46□□□□□ -1.86
SCL1YGL011C RNY1Q02933 434 aaKnown RBP3.46□□□□□ -1.86
SCL1YGL011C RAD7P06779 565 aa3.45□□□□□ -1.86
SCL1YGL011C DBP3P20447 523 aaKnown RBP3.45□□□□□ -1.86
SCL1YGL011C SAR1P20606 190 aaKnown RBP3.45□□□□□ -1.86
SCL1YGL011C RPL5P26321 297 aaKnown RBP3.45□□□□□ -1.86
SCL1YGL011C RFT1P38206 574 aaPredicted RBP3.45□□□□□ -1.86
SCL1YGL011C CTM1P38818 585 aa3.45□□□□□ -1.86
SCL1YGL011C SOP4P39543 234 aaPredicted RBP3.45□□□□□ -1.86
SCL1YGL011C PCL7P40186 285 aa3.45□□□□□ -1.86
SCL1YGL011C GCD14P46959 383 aaPredicted RBP3.45□□□□□ -1.86
SCL1YGL011C PNC1P53184 216 aaKnown RBP3.45□□□□□ -1.86
SCL1YGL011C FMP48P53233 369 aa3.45□□□□□ -1.86
SCL1YGL011C YGR266WP53326 701 aa3.45□□□□□ -1.86
SCL1YGL011C INP2Q03824 705 aa3.45□□□□□ -1.86
SCL1YGL011C UTP15Q04305 513 aaKnown RBP3.45□□□□□ -1.86
SCL1YGL011C ECM18Q04623 453 aa3.45□□□□□ -1.86
SCL1YGL011C APC9Q12107 265 aa3.45□□□□□ -1.86
SCL1YGL011C YKL187CP34231 750 aa3.44□□□□□ -1.86
SCL1YGL011C ARP5P53946 755 aa3.44□□□□□ -1.86
SCL1YGL011C UTP23Q12339 254 aaKnown RBP3.44□□□□□ -1.86
SCL1YGL011C PFK27Q12471 397 aaPredicted RBP3.44□□□□□ -1.86
SCL1YGL011C COX10P21592 462 aa3.43□□□□□ -1.86
SCL1YGL011C GPI12P23797 304 aa3.43□□□□□ -1.86
SCL1YGL011C ZRT3P34240 503 aa3.43□□□□□ -1.86
SCL1YGL011C YPC1P38298 316 aa3.43□□□□□ -1.86
SCL1YGL011C UFE1P41834 346 aa3.43□□□□□ -1.86
SCL1YGL011C YNR066CP53752 436 aa3.43□□□□□ -1.86
SCL1YGL011C SPO19Q03029 223 aa3.43□□□□□ -1.86
SCL1YGL011C DFM1Q12743 341 aaKnown RBP3.43□□□□□ -1.86
SCL1YGL011C BI3Q9ZZW7 517 aa3.43□□□□□ -1.86
SCL1YGL011C UGA1P17649 471 aa3.42□□□□□ -1.86
SCL1YGL011C INO2P26798 304 aa3.42□□□□□ -1.86
SCL1YGL011C RPC25P35718 212 aa3.42□□□□□ -1.86
SCL1YGL011C MCH2P36032 473 aa3.42□□□□□ -1.86
SCL1YGL011C SLM1P40485 686 aa3.42□□□□□ -1.86
SCL1YGL011C COX16P47081 118 aa3.42□□□□□ -1.86
SCL1YGL011C ERV25P54837 211 aaKnown RBP3.42□□□□□ -1.86
SCL1YGL011C IES4Q08561 116 aa3.42□□□□□ -1.86
SCL1YGL011C YPL245WQ12179 454 aaKnown RBP3.42□□□□□ -1.86
SCL1YGL011C SIA1Q12212 622 aa3.42□□□□□ -1.86
SCL1YGL011C FUS3P16892 353 aaKnown RBP3.41□□□□□ -1.86
SCL1YGL011C DAL80P26343 269 aa3.41□□□□□ -1.86
SCL1YGL011C RPB9P27999 122 aa3.41□□□□□ -1.86
SCL1YGL011C SWD2P36104 329 aaPredicted RBP3.41□□□□□ -1.86
SCL1YGL011C FRM2P37261 193 aa3.41□□□□□ -1.86
SCL1YGL011C YBR062CP38239 180 aa3.41□□□□□ -1.86
SCL1YGL011C BDH1P39714 382 aa3.41□□□□□ -1.86
SCL1YGL011C YGL185CP53100 379 aa3.41□□□□□ -1.86
SCL1YGL011C MRX8Q05473 314 aa3.41□□□□□ -1.86
SCL1YGL011C ECM19Q06011 112 aa3.41□□□□□ -1.86
SCL1YGL011C MRPL23Q12487 163 aaPredicted RBP3.41□□□□□ -1.86
SCL1YGL011C TDH3P00359 332 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
SCL1YGL011C RPL31AP0C2H8 113 aaKnown RBP3.4□□□□□ -1.87
SCL1YGL011C RPL16BP26785 198 aaKnown RBP3.4□□□□□ -1.87
SCL1YGL011C ZIP1P31111 875 aa3.4□□□□□ -1.87
SCL1YGL011C GPX1P36014 167 aa3.4□□□□□ -1.87
SCL1YGL011C FRT2P39734 528 aa3.4□□□□□ -1.87
SCL1YGL011C GDS1P41913 522 aa3.4□□□□□ -1.87
SCL1YGL011C SWC4P53201 476 aa3.4□□□□□ -1.87
SCL1YGL011C APC4Q04601 652 aa3.4□□□□□ -1.87
SCL1YGL011C YDL211CQ12121 372 aa3.4□□□□□ -1.87
SCL1YGL011C LAG2Q92325 660 aa3.4□□□□□ -1.87
SCL1YGL011C IZH4Q99393 312 aa3.4□□□□□ -1.87
SCL1YGL011C GAL7P08431 366 aa3.39□□□□□ -1.87
SCL1YGL011C YMR262WP38430 313 aa3.39□□□□□ -1.87
SCL1YGL011C UBC13P52490 153 aa3.39□□□□□ -1.87
SCL1YGL011C GMC1Q04399 608 aa3.39□□□□□ -1.87
SCL1YGL011C ERV41Q04651 352 aa3.39□□□□□ -1.87
SCL1YGL011C YLR446WQ06204 433 aa3.39□□□□□ -1.87
SCL1YGL011C YLR413WQ06689 675 aa3.39□□□□□ -1.87
SCL1YGL011C CSM1P25651 190 aa3.38□□□□□ -1.87
SCL1YGL011C SKG6P32900 734 aaPredicted RBP3.38□□□□□ -1.87
SCL1YGL011C YNL050CP53952 270 aa3.38□□□□□ -1.87
SCL1YGL011C SEC13Q04491 297 aaKnown RBP3.38□□□□□ -1.87
SCL1YGL011C YOR292CQ08743 309 aa3.38□□□□□ -1.87
SCL1YGL011C TRM10Q12400 293 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms