RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C AVO1Q08236 1176 aa3.28□□□□□ -1.88
TRS120YDR407C RPS21BQ3E754 87 aaKnown RBP3.28□□□□□ -1.88
TRS120YDR407C YKR104WP0CE69 306 aa3.27□□□□□ -1.89
TRS120YDR407C SSO1P32867 290 aa3.27□□□□□ -1.89
TRS120YDR407C TMA19P35691 167 aaKnown RBP3.27□□□□□ -1.89
TRS120YDR407C PEX32P38292 413 aa3.27□□□□□ -1.89
TRS120YDR407C GIC1P38785 314 aa3.27□□□□□ -1.89
TRS120YDR407C SMK1P41808 388 aa3.27□□□□□ -1.89
TRS120YDR407C TIM54P47045 478 aa3.27□□□□□ -1.89
TRS120YDR407C PGA1P53896 198 aa3.27□□□□□ -1.89
TRS120YDR407C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
TRS120YDR407C SSY1Q03770 852 aa3.27□□□□□ -1.89
TRS120YDR407C ANT1Q06497 328 aa3.27□□□□□ -1.89
TRS120YDR407C MCH4Q08268 501 aa3.27□□□□□ -1.89
TRS120YDR407C YLR108CQ12259 485 aa3.27□□□□□ -1.89
TRS120YDR407C MMP1Q12372 583 aa3.27□□□□□ -1.89
TRS120YDR407C PDA1P16387 420 aaKnown RBP3.27□□□□□ -1.89
TRS120YDR407C PRO1P32264 428 aa3.27□□□□□ -1.89
TRS120YDR407C PFS1P38872 237 aa3.27□□□□□ -1.89
TRS120YDR407C AIM2P39721 246 aa3.27□□□□□ -1.89
TRS120YDR407C BAP3P41815 604 aa3.27□□□□□ -1.89
TRS120YDR407C VNX1P42839 908 aa3.27□□□□□ -1.89
TRS120YDR407C PAM16P42949 149 aa3.27□□□□□ -1.89
TRS120YDR407C MNT4P53745 580 aa3.27□□□□□ -1.89
TRS120YDR407C RHO5P53879 331 aaKnown RBP3.27□□□□□ -1.89
TRS120YDR407C NRG1Q03125 231 aa3.27□□□□□ -1.89
TRS120YDR407C YMR010WQ03687 405 aa3.27□□□□□ -1.89
TRS120YDR407C UTP21Q06078 939 aaPredicted RBP3.27□□□□□ -1.89
TRS120YDR407C SKI7Q08491 747 aaPredicted RBP3.27□□□□□ -1.89
TRS120YDR407C IRC13Q08630 104 aa3.27□□□□□ -1.89
TRS120YDR407C BTS1Q12051 335 aa3.27□□□□□ -1.89
TRS120YDR407C NAG1Q8TGN9 163 aa3.27□□□□□ -1.89
TRS120YDR407C ACB1P31787 87 aa3.27□□□□□ -1.89
TRS120YDR407C SDS22P36047 338 aa3.27□□□□□ -1.89
TRS120YDR407C SMB1P40018 196 aaKnown RBP3.27□□□□□ -1.89
TRS120YDR407C FMP10P40098 244 aa3.27□□□□□ -1.89
TRS120YDR407C DOC1P53068 250 aa3.27□□□□□ -1.89
TRS120YDR407C SDT1P53078 280 aa3.27□□□□□ -1.89
TRS120YDR407C YMR178WQ03219 274 aaKnown RBP3.27□□□□□ -1.89
TRS120YDR407C SCS7Q03529 384 aa3.27□□□□□ -1.89
TRS120YDR407C DCR2Q05924 578 aa3.27□□□□□ -1.89
TRS120YDR407C DCI1Q08558 271 aa3.27□□□□□ -1.89
TRS120YDR407C RPN5Q12250 445 aaKnown RBP3.27□□□□□ -1.89
TRS120YDR407C YDL177CQ12257 170 aa3.27□□□□□ -1.89
TRS120YDR407C RGT2Q12300 763 aa3.27□□□□□ -1.89
TRS120YDR407C MTR10Q99189 972 aa3.27□□□□□ -1.89
TRS120YDR407C ATP4P05626 244 aa3.26□□□□□ -1.89
TRS120YDR407C MRP2P10663 115 aaPredicted RBP3.26□□□□□ -1.89
TRS120YDR407C PET9P18239 318 aaKnown RBP3.26□□□□□ -1.89
TRS120YDR407C PUT3P25502 979 aaPredicted RBP3.26□□□□□ -1.89
TRS120YDR407C VMA3P25515 160 aa3.26□□□□□ -1.89
TRS120YDR407C FAA1P30624 700 aaKnown RBP3.26□□□□□ -1.89
TRS120YDR407C SUI1P32911 108 aaKnown RBP3.26□□□□□ -1.89
TRS120YDR407C YKL162CP36052 402 aa3.26□□□□□ -1.89
TRS120YDR407C AVT5P38176 459 aa3.26□□□□□ -1.89
TRS120YDR407C CHS7P38843 316 aa3.26□□□□□ -1.89
TRS120YDR407C DPB11P47027 764 aaPredicted RBP3.26□□□□□ -1.89
TRS120YDR407C YPD1Q07688 167 aa3.26□□□□□ -1.89
TRS120YDR407C COQ10Q08058 207 aa3.26□□□□□ -1.89
TRS120YDR407C MDM32Q12171 622 aa3.26□□□□□ -1.89
TRS120YDR407C AIM45Q12480 344 aaKnown RBP3.26□□□□□ -1.89
TRS120YDR407C ISN1Q99312 450 aa3.26□□□□□ -1.89
TRS120YDR407C FUS3P16892 353 aaKnown RBP3.26□□□□□ -1.89
TRS120YDR407C BUD5P25300 642 aaPredicted RBP3.26□□□□□ -1.89
TRS120YDR407C YCP4P25349 247 aaKnown RBP3.26□□□□□ -1.89
TRS120YDR407C YAL037WP39728 267 aa3.26□□□□□ -1.89
TRS120YDR407C ACS2P52910 683 aaKnown RBP3.26□□□□□ -1.89
TRS120YDR407C TIM11P81449 96 aaPredicted RBP3.26□□□□□ -1.89
TRS120YDR407C HEM25Q07534 307 aa3.26□□□□□ -1.89
TRS120YDR407C TIR4Q12218 487 aaPredicted RBP3.26□□□□□ -1.89
TRS120YDR407C YPR064WQ12492 139 aa3.26□□□□□ -1.89
TRS120YDR407C YIL046W-AQ3E7Z4 54 aa3.26□□□□□ -1.89
TRS120YDR407C HBN1Q96VH4 193 aa3.26□□□□□ -1.89
TRS120YDR407C FSH3Q99369 266 aa3.26□□□□□ -1.89
TRS120YDR407C RAS1P01119 309 aa3.26□□□□□ -1.89
TRS120YDR407C RPL6BP05739 176 aaKnown RBP3.26□□□□□ -1.89
TRS120YDR407C TIM12P32830 109 aa3.26□□□□□ -1.89
TRS120YDR407C PAD1P33751 242 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
TRS120YDR407C SRY1P36007 326 aa3.26□□□□□ -1.89
TRS120YDR407C OTU1P43558 301 aa3.26□□□□□ -1.89
TRS120YDR407C COG7P53195 279 aa3.26□□□□□ -1.89
TRS120YDR407C YNL260CP53846 198 aa3.26□□□□□ -1.89
TRS120YDR407C MSC1Q03104 513 aa3.26□□□□□ -1.89
TRS120YDR407C RRN11Q04712 507 aa3.26□□□□□ -1.89
TRS120YDR407C ARG7Q04728 441 aa3.26□□□□□ -1.89
TRS120YDR407C YMR252CQ04814 134 aa3.26□□□□□ -1.89
TRS120YDR407C REP2P03872 296 aa3.25□□□□□ -1.89
TRS120YDR407C PRB1P09232 635 aa3.25□□□□□ -1.89
TRS120YDR407C NPR1P22211 790 aa3.25□□□□□ -1.89
TRS120YDR407C WBP1P33767 430 aaKnown RBP3.25□□□□□ -1.89
TRS120YDR407C ALG3P38179 458 aa3.25□□□□□ -1.89
TRS120YDR407C PEX28P38848 579 aa3.25□□□□□ -1.89
TRS120YDR407C LNP1P38878 278 aa3.25□□□□□ -1.89
TRS120YDR407C MRX5P47007 382 aa3.25□□□□□ -1.89
TRS120YDR407C MTM1P53320 366 aa3.25□□□□□ -1.89
TRS120YDR407C MRPL50P53724 139 aa3.25□□□□□ -1.89
TRS120YDR407C DBP6P53734 629 aaKnown RBP3.25□□□□□ -1.89
TRS120YDR407C MRPL22P53881 309 aa3.25□□□□□ -1.89
TRS120YDR407C YMR265CQ03508 461 aaKnown RBP3.25□□□□□ -1.89
TRS120YDR407C YLR036CQ07986 203 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms