RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BFR2	YDR299W	YPR195C	Q06594	109 aa		0.72	□□□□□ -2.29
BFR2	YDR299W	RLP24	Q07915	199 aa	Known RBP	0.72	□□□□□ -2.29
BFR2	YDR299W	TAF10	Q12030	206 aa		0.72	□□□□□ -2.29
BFR2	YDR299W	YDR018C	Q12185	396 aa		0.72	□□□□□ -2.29
BFR2	YDR299W	TIR4	Q12218	487 aa	Predicted RBP	0.72	□□□□□ -2.29
BFR2	YDR299W	TFC7	Q12415	435 aa		0.72	□□□□□ -2.29
BFR2	YDR299W	DFM1	Q12743	341 aa	Known RBP	0.72	□□□□□ -2.29
BFR2	YDR299W	REP1	P03871	373 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	CBP2	P03874	630 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	RAD1	P06777	1100 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	YOL163W	P0CF20	169 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	GCD2	P12754	651 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	CPT1	P17898	393 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	DAP2	P18962	818 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	SAG1	P20840	650 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	UTR1	P21373	530 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	RSA4	P25382	515 aa	Known RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	RPL5	P26321	297 aa	Known RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	DBP7	P36120	742 aa	Known RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	YHL044W	P38727	235 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	ECM14	P38836	430 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	LIN1	P38852	340 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	TDA11	P38854	504 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	SSO2	P39926	295 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	EDC2	P40023	145 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	SCC4	P40090	624 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	RRG9	P40156	214 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	YFL040W	P43562	540 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	YJL144W	P47009	104 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	KEL2	P50090	882 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	YGL118C	P53132	145 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	RPN14	P53196	417 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	SWC4	P53201	476 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	PXR1	P53335	271 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	ARP5	P53946	755 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	YLR297W	Q05899	129 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	ARC18	Q05933	178 aa	Known RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	YOL029C	Q08187	201 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	RRP42	Q12277	265 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	UTP23	Q12339	254 aa	Known RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	RPN6	Q12377	434 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	ERP3	Q12403	225 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	PRP46	Q12417	451 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	PFK27	Q12471	397 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	YIL002W-A	Q3E7Z5	69 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	LAG2	Q92325	660 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	STE3	P06783	470 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	GAL3	P13045	520 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	DAL5	P15365	543 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	ERD1	P16151	362 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	OSM1	P21375	501 aa	Known RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	KRR1	P25586	316 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	RPL16B	P26785	198 aa	Known RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.71	□□□□□ -2.3	not detected
BFR2	YDR299W	BMH1	P29311	267 aa	Known RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	TKL2	P33315	681 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	PTK1	P36002	662 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	MCH2	P36032	473 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	IML3	P38265	245 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	YMR262W	P38430	313 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	YGP1	P38616	354 aa	Known RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	SPT8	P38915	602 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	POP2	P39008	433 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	SOP4	P39543	234 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	YCH1	P42937	148 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	LOC1	P43586	204 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	ASG7	P46993	209 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	SHE4	P51534	789 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	COG7	P53195	279 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	CAX4	P53223	239 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	FMP48	P53233	369 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	VOA1	P53262	265 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	YGR168C	P53293	376 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	OKP1	P53298	406 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	YNL040W	P53960	456 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	YPL077C	Q02831	240 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	YPL113C	Q02961	396 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	SCS7	Q03529	384 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	INP1	Q03694	420 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	SNX41	Q04053	625 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	PEX30	Q06169	523 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	RTC5	Q12108	567 aa	Known RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	NFI1	Q12216	726 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	YPR1	Q12458	312 aa		0.71	□□□□□ -2.3
BFR2	YDR299W	DCP1	Q12517	231 aa	Predicted RBP	0.71	□□□□□ -2.3
BFR2	YDR299W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.7	□□□□□ -2.3	not detected
BFR2	YDR299W	YAK1	P14680	807 aa		0.7	□□□□□ -2.3
BFR2	YDR299W	TPM1	P17536	199 aa	Known RBP	0.7	□□□□□ -2.3
BFR2	YDR299W	MRPL20	P22354	195 aa	Predicted RBP	0.7	□□□□□ -2.3
BFR2	YDR299W	RRT12	P25381	491 aa		0.7	□□□□□ -2.3
BFR2	YDR299W	UTR5	P32630	166 aa		0.7	□□□□□ -2.3
BFR2	YDR299W	AGA2	P32781	87 aa		0.7	□□□□□ -2.3
BFR2	YDR299W	ZRT1	P32804	376 aa		0.7	□□□□□ -2.3
BFR2	YDR299W	ZRT3	P34240	503 aa		0.7	□□□□□ -2.3
BFR2	YDR299W	CAB3	P36076	571 aa		0.7	□□□□□ -2.3
BFR2	YDR299W	YKR032W	P36127	104 aa		0.7	□□□□□ -2.3
BFR2	YDR299W	MRPL3	P36516	390 aa		0.7	□□□□□ -2.3
BFR2	YDR299W	YDR089W	P38966	869 aa		0.7	□□□□□ -2.3
BFR2	YDR299W	HEM14	P40012	539 aa		0.7	□□□□□ -2.3
BFR2	YDR299W	KRE29	P40026	464 aa		0.7	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms