RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W DTD1Q07648 150 aaKnown RBP2.21□□□□□ -2.06
SHS1YDL225W IES4Q08561 116 aa2.21□□□□□ -2.06
SHS1YDL225W YPR1Q12458 312 aa2.21□□□□□ -2.06
SHS1YDL225W FLO11P08640 1367 aa2.2□□□□□ -2.06
SHS1YDL225W CAR2P07991 424 aaKnown RBP2.2□□□□□ -2.06
SHS1YDL225W ERD1P16151 362 aa2.2□□□□□ -2.06
SHS1YDL225W ZRT1P32804 376 aa2.2□□□□□ -2.06
SHS1YDL225W CYM1P32898 989 aa2.2□□□□□ -2.06
SHS1YDL225W RFT1P38206 574 aaPredicted RBP2.2□□□□□ -2.06
SHS1YDL225W YHR035WP38769 630 aa2.2□□□□□ -2.06
SHS1YDL225W PET8P38921 284 aa2.2□□□□□ -2.06
SHS1YDL225W UFE1P41834 346 aa2.2□□□□□ -2.06
SHS1YDL225W SDS23P53172 527 aa2.2□□□□□ -2.06
SHS1YDL225W VOA1P53262 265 aa2.2□□□□□ -2.06
SHS1YDL225W INP2Q03824 705 aa2.2□□□□□ -2.06
SHS1YDL225W UBX2Q04228 584 aa2.2□□□□□ -2.06
SHS1YDL225W UTP15Q04305 513 aaKnown RBP2.2□□□□□ -2.06
SHS1YDL225W MIM1Q08176 113 aa2.2□□□□□ -2.06
SHS1YDL225W FUS3P16892 353 aaKnown RBP2.19□□□□□ -2.06
SHS1YDL225W COX10P21592 462 aa2.19□□□□□ -2.06
SHS1YDL225W YKL187CP34231 750 aa2.19□□□□□ -2.06
SHS1YDL225W DSE1P40077 573 aa2.19□□□□□ -2.06
SHS1YDL225W RRG9P40156 214 aa2.19□□□□□ -2.06
SHS1YDL225W OKP1P53298 406 aa2.19□□□□□ -2.06
SHS1YDL225W SNX41Q04053 625 aa2.19□□□□□ -2.06
SHS1YDL225W MRX8Q05473 314 aa2.19□□□□□ -2.06
SHS1YDL225W DCP1Q12517 231 aaPredicted RBP2.19□□□□□ -2.06
SHS1YDL225W SAR1P20606 190 aaKnown RBP2.18□□□□□ -2.06
SHS1YDL225W MRPL20P22354 195 aaPredicted RBP2.18□□□□□ -2.06
SHS1YDL225W ZRT3P34240 503 aa2.18□□□□□ -2.06
SHS1YDL225W FRM2P37261 193 aa2.18□□□□□ -2.06
SHS1YDL225W CDC40P40968 455 aaPredicted RBP2.18□□□□□ -2.06
SHS1YDL225W HST4P53688 370 aa2.18□□□□□ -2.06
SHS1YDL225W APC4Q04601 652 aa2.18□□□□□ -2.06
SHS1YDL225W ECM19Q06011 112 aa2.18□□□□□ -2.06
SHS1YDL225W VAC14Q06708 880 aa2.18□□□□□ -2.06
SHS1YDL225W YPL245WQ12179 454 aaKnown RBP2.18□□□□□ -2.06
SHS1YDL225W UTP23Q12339 254 aaKnown RBP2.18□□□□□ -2.06
SHS1YDL225W BI3Q9ZZW7 517 aa2.18□□□□□ -2.06
SHS1YDL225W CKA2P19454 339 aa2.18□□□□□ -2.06
SHS1YDL225W SOP4P39543 234 aaPredicted RBP2.18□□□□□ -2.06
SHS1YDL225W YGR266WP53326 701 aa2.18□□□□□ -2.06
SHS1YDL225W YNR066CP53752 436 aa2.18□□□□□ -2.06
SHS1YDL225W YDL211CQ12121 372 aa2.18□□□□□ -2.06
SHS1YDL225W PFK27Q12471 397 aaPredicted RBP2.18□□□□□ -2.06
SHS1YDL225W INO2P26798 304 aa2.17□□□□□ -2.06
SHS1YDL225W FMT1P32785 401 aa2.17□□□□□ -2.06
SHS1YDL225W SKG6P32900 734 aaPredicted RBP2.17□□□□□ -2.06
SHS1YDL225W MCH2P36032 473 aa2.17□□□□□ -2.06
SHS1YDL225W CTM1P38818 585 aa2.17□□□□□ -2.06
SHS1YDL225W BDH1P39714 382 aa2.17□□□□□ -2.06
SHS1YDL225W LOH1P47055 219 aa2.17□□□□□ -2.06
SHS1YDL225W RRG8Q06109 277 aa2.17□□□□□ -2.06
SHS1YDL225W RPB9P27999 122 aa2.16□□□□□ -2.06
SHS1YDL225W TRR2P38816 342 aa2.16□□□□□ -2.06
SHS1YDL225W FRT2P39734 528 aa2.16□□□□□ -2.06
SHS1YDL225W YIL054WP40524 105 aa2.16□□□□□ -2.06
SHS1YDL225W LOC1P43586 204 aaPredicted RBP2.16□□□□□ -2.06
SHS1YDL225W MIC19P43594 170 aa2.16□□□□□ -2.06
SHS1YDL225W YOR292CQ08743 309 aa2.16□□□□□ -2.06
SHS1YDL225W SIA1Q12212 622 aa2.16□□□□□ -2.06
SHS1YDL225W DFM1Q12743 341 aaKnown RBP2.16□□□□□ -2.06
SHS1YDL225W RAD7P06779 565 aa2.15□□□□□ -2.06
SHS1YDL225W CPT1P17898 393 aa2.15□□□□□ -2.06
SHS1YDL225W RPL5P26321 297 aaKnown RBP2.15□□□□□ -2.06
SHS1YDL225W YPC1P38298 316 aa2.15□□□□□ -2.06
SHS1YDL225W YMR262WP38430 313 aa2.15□□□□□ -2.06
SHS1YDL225W RRF1P38771 230 aa2.15□□□□□ -2.06
SHS1YDL225W COX16P47081 118 aa2.15□□□□□ -2.06
SHS1YDL225W PNC1P53184 216 aaKnown RBP2.15□□□□□ -2.06
SHS1YDL225W BIO4P53630 237 aa2.15□□□□□ -2.06
SHS1YDL225W GMC1Q04399 608 aa2.15□□□□□ -2.06
SHS1YDL225W IZH4Q99393 312 aa2.15□□□□□ -2.06
SHS1YDL225W RPL31AP0C2H8 113 aaKnown RBP2.15□□□□□ -2.07
SHS1YDL225W UGA1P17649 471 aa2.15□□□□□ -2.07
SHS1YDL225W DBP3P20447 523 aaKnown RBP2.15□□□□□ -2.07
SHS1YDL225W RPL16BP26785 198 aaKnown RBP2.15□□□□□ -2.07
SHS1YDL225W TPS2P31688 896 aaKnown RBP2.15□□□□□ -2.07
SHS1YDL225W RPC25P35718 212 aa2.15□□□□□ -2.07
SHS1YDL225W PRY2P36110 329 aa2.15□□□□□ -2.07
SHS1YDL225W SLM1P40485 686 aa2.15□□□□□ -2.07
SHS1YDL225W YIR035CP40579 254 aa2.15□□□□□ -2.07
SHS1YDL225W PFS2P42841 465 aaKnown RBP2.15□□□□□ -2.07
SHS1YDL225W YGL118CP53132 145 aa2.15□□□□□ -2.07
SHS1YDL225W ARP5P53946 755 aa2.15□□□□□ -2.07
SHS1YDL225W SPO19Q03029 223 aa2.15□□□□□ -2.07
SHS1YDL225W ECM18Q04623 453 aa2.15□□□□□ -2.07
SHS1YDL225W YLR446WQ06204 433 aa2.15□□□□□ -2.07
SHS1YDL225W DIB1Q06819 143 aaPredicted RBP2.15□□□□□ -2.07
SHS1YDL225W APC9Q12107 265 aa2.15□□□□□ -2.07
SHS1YDL225W TRM10Q12400 293 aa2.15□□□□□ -2.07
SHS1YDL225W TDH3P00359 332 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SHS1YDL225W SWD2P36104 329 aaPredicted RBP2.14□□□□□ -2.07
SHS1YDL225W MRPL40P36534 297 aa2.14□□□□□ -2.07
SHS1YDL225W PCL7P40186 285 aa2.14□□□□□ -2.07
SHS1YDL225W CAX4P53223 239 aa2.14□□□□□ -2.07
SHS1YDL225W APJ1P53940 528 aa2.14□□□□□ -2.07
SHS1YDL225W SMD1Q02260 146 aaPredicted RBP2.14□□□□□ -2.07
SHS1YDL225W TFC7Q12415 435 aa2.14□□□□□ -2.07
SHS1YDL225W LAG2Q92325 660 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms