RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C RRP36Q12481 300 aaPredicted RBP2.28□□□□□ -2.04
UBX3YDL091C YIL002W-AQ3E7Z5 69 aa2.28□□□□□ -2.04
UBX3YDL091C IKI3Q06706 1349 aaKnown RBP2.28□□□□□ -2.05
UBX3YDL091C STE2D6VTK4 431 aa2.27□□□□□ -2.05
UBX3YDL091C CTA1P15202 515 aa2.27□□□□□ -2.05
UBX3YDL091C TPM1P17536 199 aaKnown RBP2.27□□□□□ -2.05
UBX3YDL091C VPS1P21576 704 aaKnown RBP2.27□□□□□ -2.05
UBX3YDL091C EPT1P22140 391 aa2.27□□□□□ -2.05
UBX3YDL091C SEC14P24280 304 aaKnown RBP2.27□□□□□ -2.05
UBX3YDL091C ERG9P29704 444 aa2.27□□□□□ -2.05
UBX3YDL091C ACB1P31787 87 aa2.27□□□□□ -2.05
UBX3YDL091C BMH2P34730 273 aaKnown RBP2.27□□□□□ -2.05
UBX3YDL091C IST2P38250 946 aa2.27□□□□□ -2.05
UBX3YDL091C SPT8P38915 602 aa2.27□□□□□ -2.05
UBX3YDL091C END3P39013 349 aa2.27□□□□□ -2.05
UBX3YDL091C BTT1P40314 149 aaPredicted RBP2.27□□□□□ -2.05
UBX3YDL091C STB1P42845 420 aa2.27□□□□□ -2.05
UBX3YDL091C YJR054WP47114 497 aa2.27□□□□□ -2.05
UBX3YDL091C BIO3P50277 480 aa2.27□□□□□ -2.05
UBX3YDL091C LSG1P53145 640 aaKnown RBP2.27□□□□□ -2.05
UBX3YDL091C ORM1P53224 222 aa2.27□□□□□ -2.05
UBX3YDL091C YML108WQ03759 105 aa2.27□□□□□ -2.05
UBX3YDL091C RVB1Q03940 463 aaKnown RBP2.27□□□□□ -2.05
UBX3YDL091C YDR262WQ12331 272 aa2.27□□□□□ -2.05
UBX3YDL091C CCH1P50077 2039 aa2.27□□□□□ -2.05
UBX3YDL091C RPO31P04051 1460 aa2.27□□□□□ -2.05
UBX3YDL091C YPK9Q12697 1472 aa2.27□□□□□ -2.05
UBX3YDL091C RPS16AP0CX51 143 aaKnown RBP2.26□□□□□ -2.05
UBX3YDL091C RPS16BP0CX52 143 aaKnown RBP2.26□□□□□ -2.05
UBX3YDL091C MRPS28P21771 286 aa2.26□□□□□ -2.05
UBX3YDL091C DCC1P25559 380 aa2.26□□□□□ -2.05
UBX3YDL091C DAL80P26343 269 aa2.26□□□□□ -2.05
UBX3YDL091C KRE6P32486 720 aa2.26□□□□□ -2.05
UBX3YDL091C MEI5P32489 222 aa2.26□□□□□ -2.05
UBX3YDL091C CPR5P35176 225 aa2.26□□□□□ -2.05
UBX3YDL091C YKL063CP35725 167 aa2.26□□□□□ -2.05
UBX3YDL091C ECM4P36156 370 aa2.26□□□□□ -2.05
UBX3YDL091C SRL3P36167 246 aa2.26□□□□□ -2.05
UBX3YDL091C CTM1P38818 585 aa2.26□□□□□ -2.05
UBX3YDL091C ATG7P38862 630 aa2.26□□□□□ -2.05
UBX3YDL091C AGX1P43567 385 aa2.26□□□□□ -2.05
UBX3YDL091C MIG2P53035 382 aa2.26□□□□□ -2.05
UBX3YDL091C HST4P53688 370 aa2.26□□□□□ -2.05
UBX3YDL091C MRS2Q01926 470 aa2.26□□□□□ -2.05
UBX3YDL091C TRM82Q03774 444 aa2.26□□□□□ -2.05
UBX3YDL091C ARO80Q04052 950 aa2.26□□□□□ -2.05
UBX3YDL091C UBX2Q04228 584 aa2.26□□□□□ -2.05
UBX3YDL091C YLR297WQ05899 129 aa2.26□□□□□ -2.05
UBX3YDL091C DDC1Q08949 612 aa2.26□□□□□ -2.05
UBX3YDL091C YOR289WQ12012 251 aaPredicted RBP2.26□□□□□ -2.05
UBX3YDL091C NOT5Q12514 560 aaPredicted RBP2.26□□□□□ -2.05
UBX3YDL091C SPO24Q3E752 67 aa2.26□□□□□ -2.05
UBX3YDL091C SPP41P38904 1435 aa2.26□□□□□ -2.05
UBX3YDL091C CDC37P06101 506 aaKnown RBP2.25□□□□□ -2.05
UBX3YDL091C GAL3P13045 520 aa2.25□□□□□ -2.05
UBX3YDL091C UTR1P21373 530 aa2.25□□□□□ -2.05
UBX3YDL091C ZIP1P31111 875 aa2.25□□□□□ -2.05
UBX3YDL091C SPS19P32573 292 aaKnown RBP2.25□□□□□ -2.05
UBX3YDL091C CSE1P33307 960 aa2.25□□□□□ -2.05
UBX3YDL091C KTI12P34253 313 aaKnown RBP2.25□□□□□ -2.05
UBX3YDL091C PEX32P38292 413 aa2.25□□□□□ -2.05
UBX3YDL091C MMS21P38632 267 aa2.25□□□□□ -2.05
UBX3YDL091C EFM1P38732 585 aa2.25□□□□□ -2.05
UBX3YDL091C RRF1P38771 230 aa2.25□□□□□ -2.05
UBX3YDL091C RRT13P40042 185 aa2.25□□□□□ -2.05
UBX3YDL091C NAS2P40555 220 aa2.25□□□□□ -2.05
UBX3YDL091C SNZ3P43545 298 aa2.25□□□□□ -2.05
UBX3YDL091C TAF6P53040 516 aa2.25□□□□□ -2.05
UBX3YDL091C CDH1P53197 566 aa2.25□□□□□ -2.05
UBX3YDL091C YGR168CP53293 376 aa2.25□□□□□ -2.05
UBX3YDL091C NRM1P53718 249 aa2.25□□□□□ -2.05
UBX3YDL091C SNZ2P53824 298 aa2.25□□□□□ -2.05
UBX3YDL091C MRX11Q03079 207 aa2.25□□□□□ -2.05
UBX3YDL091C CSM3Q04659 317 aa2.25□□□□□ -2.05
UBX3YDL091C YPR195CQ06594 109 aa2.25□□□□□ -2.05
UBX3YDL091C DRS2P39524 1355 aa2.25□□□□□ -2.05
UBX3YDL091C SSN2P38931 1420 aa2.25□□□□□ -2.05
UBX3YDL091C TRM3Q07527 1436 aa2.25□□□□□ -2.05
UBX3YDL091C BGL2P15703 313 aaKnown RBP2.24□□□□□ -2.05
UBX3YDL091C PET18P25362 215 aa2.24□□□□□ -2.05
UBX3YDL091C PMT2P31382 759 aa2.24□□□□□ -2.05
UBX3YDL091C AGA2P32781 87 aa2.24□□□□□ -2.05
UBX3YDL091C RIB7P33312 244 aa2.24□□□□□ -2.05
UBX3YDL091C FRM2P37261 193 aa2.24□□□□□ -2.05
UBX3YDL091C POP7P38291 140 aa2.24□□□□□ -2.05
UBX3YDL091C YBR242WP38331 238 aa2.24□□□□□ -2.05
UBX3YDL091C VMA22P38784 181 aa2.24□□□□□ -2.05
UBX3YDL091C RTC3P38804 111 aaPredicted RBP2.24□□□□□ -2.05
UBX3YDL091C LIN1P38852 340 aaPredicted RBP2.24□□□□□ -2.05
UBX3YDL091C SMC2P38989 1170 aaKnown RBP2.24□□□□□ -2.05
UBX3YDL091C MTW1P39731 289 aa2.24□□□□□ -2.05
UBX3YDL091C SSO2P39926 295 aa2.24□□□□□ -2.05
UBX3YDL091C PCL7P40186 285 aa2.24□□□□□ -2.05
UBX3YDL091C UTP25P40498 721 aaKnown RBP2.24□□□□□ -2.05
UBX3YDL091C APS3P47064 194 aa2.24□□□□□ -2.05
UBX3YDL091C CPR7P47103 393 aa2.24□□□□□ -2.05
UBX3YDL091C KAP114P53067 1004 aa2.24□□□□□ -2.05
UBX3YDL091C CGR1P53188 120 aa2.24□□□□□ -2.05
UBX3YDL091C SED5Q01590 340 aa2.24□□□□□ -2.05
UBX3YDL091C KRE28Q04431 385 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms