RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	PRM4	Q12498	284 aa		2.65	□□□□□ -1.99
APA1	YCL050C	SPT7	P35177	1332 aa		2.65	□□□□□ -1.99
APA1	YCL050C	RPS23A	P0CX29	145 aa	Known RBP	2.64	□□□□□ -1.99
APA1	YCL050C	RPS23B	P0CX30	145 aa		2.64	□□□□□ -1.99
APA1	YCL050C	SMI1	P32566	505 aa		2.64	□□□□□ -1.99
APA1	YCL050C	YEL043W	P32618	956 aa		2.64	□□□□□ -1.99
APA1	YCL050C	PDR16	P53860	351 aa	Known RBP	2.64	□□□□□ -1.99
APA1	YCL050C	YDR262W	Q12331	272 aa		2.64	□□□□□ -1.99
APA1	YCL050C	TFC7	Q12415	435 aa		2.64	□□□□□ -1.99
APA1	YCL050C	ERD1	P16151	362 aa		2.63	□□□□□ -1.99
APA1	YCL050C	HPR1	P17629	752 aa	Known RBP	2.63	□□□□□ -1.99
APA1	YCL050C	ACB1	P31787	87 aa		2.63	□□□□□ -1.99
APA1	YCL050C	YGR168C	P53293	376 aa		2.63	□□□□□ -1.99
APA1	YCL050C	HRT1	Q08273	121 aa		2.63	□□□□□ -1.99
APA1	YCL050C	YPL245W	Q12179	454 aa	Known RBP	2.63	□□□□□ -1.99
APA1	YCL050C	PSY3	Q12318	242 aa		2.63	□□□□□ -1.99
APA1	YCL050C	RNR2	P09938	399 aa	Known RBP	2.62	□□□□□ -1.99
APA1	YCL050C	DAL5	P15365	543 aa		2.62	□□□□□ -1.99
APA1	YCL050C	INO2	P26798	304 aa		2.62	□□□□□ -1.99
APA1	YCL050C	ECM14	P38836	430 aa		2.62	□□□□□ -1.99
APA1	YCL050C	ASP1	P38986	381 aa	Predicted RBP	2.62	□□□□□ -1.99
APA1	YCL050C	CSI1	Q04368	295 aa		2.62	□□□□□ -1.99
APA1	YCL050C	MIM1	Q08176	113 aa		2.62	□□□□□ -1.99
APA1	YCL050C	YPR063C	Q12160	140 aa		2.62	□□□□□ -1.99
APA1	YCL050C	TRM10	Q12400	293 aa		2.62	□□□□□ -1.99
APA1	YCL050C	BUD2	P33314	1104 aa		2.61	□□□□□ -1.99
APA1	YCL050C	CBP2	P03874	630 aa	Predicted RBP	2.6	□□□□□ -1.99
APA1	YCL050C	BUD13	P46947	266 aa	Predicted RBP	2.6	□□□□□ -1.99
APA1	YCL050C	PPQ1	P32945	549 aa		2.59	□□□□□ -1.99
APA1	YCL050C	SUR1	P33300	382 aa		2.59	□□□□□ -1.99
APA1	YCL050C	CSE1	P33307	960 aa		2.59	□□□□□ -1.99
APA1	YCL050C	TKL2	P33315	681 aa		2.59	□□□□□ -1.99
APA1	YCL050C	PET8	P38921	284 aa		2.59	□□□□□ -1.99
APA1	YCL050C	FYV8	P46949	817 aa	Known RBP	2.59	□□□□□ -1.99
APA1	YCL050C	YNR066C	P53752	436 aa		2.59	□□□□□ -1.99
APA1	YCL050C	IRC4	Q03036	179 aa		2.59	□□□□□ -1.99
APA1	YCL050C	YLR012C	Q07927	99 aa		2.59	□□□□□ -1.99
APA1	YCL050C	YPL264C	Q08980	353 aa		2.59	□□□□□ -1.99
APA1	YCL050C	VIK1	Q12045	647 aa		2.59	□□□□□ -1.99
APA1	YCL050C	IES3	Q12345	250 aa		2.59	□□□□□ -1.99
APA1	YCL050C	RPL18A	P0CX49	186 aa	Known RBP	2.58	□□□□□ -2
APA1	YCL050C	RPL18B	P0CX50	186 aa	Known RBP	2.58	□□□□□ -2
APA1	YCL050C	UIP5	P36137	443 aa		2.58	□□□□□ -2
APA1	YCL050C	LIN1	P38852	340 aa	Predicted RBP	2.58	□□□□□ -2
APA1	YCL050C	EDC2	P40023	145 aa	Predicted RBP	2.58	□□□□□ -2
APA1	YCL050C	ECO1	P43605	281 aa		2.58	□□□□□ -2
APA1	YCL050C	YDR114C	Q04597	100 aa		2.58	□□□□□ -2
APA1	YCL050C	GTO3	Q04806	366 aa		2.58	□□□□□ -2
APA1	YCL050C	YDR222W	Q04925	415 aa		2.58	□□□□□ -2
APA1	YCL050C	ERP3	Q12403	225 aa		2.58	□□□□□ -2
APA1	YCL050C	GAL3	P13045	520 aa		2.57	□□□□□ -2
APA1	YCL050C	ARO4	P32449	370 aa	Known RBP	2.57	□□□□□ -2
APA1	YCL050C	ALK2	P32789	676 aa	Predicted RBP	2.57	□□□□□ -2
APA1	YCL050C	MED8	P38304	223 aa		2.57	□□□□□ -2
APA1	YCL050C	SHE4	P51534	789 aa		2.57	□□□□□ -2
APA1	YCL050C	UBX2	Q04228	584 aa		2.57	□□□□□ -2
APA1	YCL050C	SGT2	Q12118	346 aa	Known RBP	2.57	□□□□□ -2
APA1	YCL050C	DAL81	P21657	970 aa		2.56	□□□□□ -2
APA1	YCL050C	UTR5	P32630	166 aa		2.56	□□□□□ -2
APA1	YCL050C	ZRT1	P32804	376 aa		2.56	□□□□□ -2
APA1	YCL050C	YGL088W	P53151	121 aa		2.56	□□□□□ -2
APA1	YCL050C	YPL080C	Q02826	108 aa		2.56	□□□□□ -2
APA1	YCL050C	YPL113C	Q02961	396 aa		2.56	□□□□□ -2
APA1	YCL050C	SNX41	Q04053	625 aa		2.56	□□□□□ -2
APA1	YCL050C	DXO1	Q06349	442 aa		2.56	□□□□□ -2
APA1	YCL050C	RLP24	Q07915	199 aa	Known RBP	2.56	□□□□□ -2
APA1	YCL050C	SDH4	P37298	181 aa		2.55	□□□□□ -2
APA1	YCL050C	SMC2	P38989	1170 aa	Known RBP	2.55	□□□□□ -2
APA1	YCL050C	SOP4	P39543	234 aa	Predicted RBP	2.55	□□□□□ -2
APA1	YCL050C	PES4	P39684	611 aa		2.55	□□□□□ -2
APA1	YCL050C	UTP25	P40498	721 aa	Known RBP	2.55	□□□□□ -2
APA1	YCL050C	NAS2	P40555	220 aa		2.55	□□□□□ -2
APA1	YCL050C	YFR045W	P43617	309 aa		2.55	□□□□□ -2
APA1	YCL050C	YNL040W	P53960	456 aa	Predicted RBP	2.55	□□□□□ -2
APA1	YCL050C	ARC18	Q05933	178 aa	Known RBP	2.55	□□□□□ -2
APA1	YCL050C	YOR292C	Q08743	309 aa		2.55	□□□□□ -2
APA1	YCL050C	UTP23	Q12339	254 aa	Known RBP	2.55	□□□□□ -2
APA1	YCL050C	MET2	P08465	486 aa		2.54	□□□□□ -2
APA1	YCL050C	MIG1	P27705	504 aa		2.54	□□□□□ -2
APA1	YCL050C	YPS1	P32329	569 aa		2.54	□□□□□ -2
APA1	YCL050C	MRPL6	P32904	214 aa		2.54	□□□□□ -2
APA1	YCL050C	AIM29	P36154	155 aa		2.54	□□□□□ -2
APA1	YCL050C	YHR035W	P38769	630 aa		2.54	□□□□□ -2
APA1	YCL050C	HSH155	P49955	971 aa	Known RBP	2.54	□□□□□ -2
APA1	YCL050C	ACT1	P60010	375 aa	Known RBP	2.54	□□□□□ -2
APA1	YCL050C	SEC13	Q04491	297 aa	Known RBP	2.54	□□□□□ -2
APA1	YCL050C	SAM4	Q08985	325 aa	Known RBP	2.54	□□□□□ -2
APA1	YCL050C	MRX4	Q12467	430 aa		2.54	□□□□□ -2
APA1	YCL050C	LAG2	Q92325	660 aa		2.54	□□□□□ -2
APA1	YCL050C	INA22	P40576	216 aa		2.53	□□□□□ -2
APA1	YCL050C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.52	□□□□□ -2.01	not detected
APA1	YCL050C	END3	P39013	349 aa		2.52	□□□□□ -2.01
APA1	YCL050C	YFL040W	P43562	540 aa		2.52	□□□□□ -2.01
APA1	YCL050C	YDR286C	Q05530	114 aa		2.52	□□□□□ -2.01
APA1	YCL050C	YPL278C	Q08990	100 aa		2.52	□□□□□ -2.01
APA1	YCL050C	YPR1	Q12458	312 aa		2.52	□□□□□ -2.01
APA1	YCL050C	CDC37	P06101	506 aa	Known RBP	2.51	□□□□□ -2.01
APA1	YCL050C	VPS1	P21576	704 aa	Known RBP	2.51	□□□□□ -2.01
APA1	YCL050C	IFM1	P25038	676 aa		2.51	□□□□□ -2.01
APA1	YCL050C	VPH2	P32341	215 aa		2.51	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 86.1 ms